Trachymyrmex cornetzi: 108757808
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Entry
108757808 CDS
T11212
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108757808
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tcz01001
]
108757808
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108757808
03036 Chromosome and associated proteins [BR:
tcz03036
]
108757808
Enzymes [BR:
tcz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108757808
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108757808
Protein kinases [BR:
tcz01001
]
Serine/threonine kinases: Other
TAF1 family
108757808
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108757808
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108757808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
108757808
NCBI-ProteinID:
XP_018357917
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MGDSDEENEKDLASGLNITGFLFGNIDDNGQLEDDILDPDAKQHLASLSRLGLSSFINEM
MSNDNNAEERETGKVDEKKDQNTTTNDMDVDYLAKSPTALDFSDINELAEDTIDEISKSN
GFDRKLDKENADYDADDEEVVSKSDTQLMPPPPIPEEKETLTAEEAEAARQRKLETPLAS
MLPSKYANINVTELFPDFRTNKVLRFSRLFGPGKPSSLPQIWRGVRKRRKKKKHHDIRDS
DSGSDQDDKKSKFKGWIMQYGPEPSTEACRSDDENKLLRPVEDKEQTGKTGESGENGDMG
PKVADWRFGPAQLWYDMLEVPETGDGFNYGFKMVEKAEEQENKPETKDEDFTDDAFLMVS
QLHWEDDVVWNGDDIKHKVMQKLNSKNNAAGWVPSSGNRTAQAFSQPGKGASVTVTPNVR
LATSQITTPLHMQSQKNKMNMGKGNQQPQREEDDTWYSIFPVENEELVYGLWEEEVIWDP
EQMKKIPKPKILTLDPNDENIVLGIPDDIDPALLHKDNGPQPKVKIPHPHVKKSKLLLGK
AGVINVLEEDTPPPPPKSPDRDPFNISNDTYYMPKSSETTLRLKVGGGNLIQHSTPVVEL
RVPFVQTHMGPMRLRNFHRPPLRRFSYGPLALPAPHGVLPLLKHIKKKAKQREQERIASG
GGDVFFMRTPEDLTGRDGELVLVEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQTYK
YGETAYAHTSPFLGILTPGQSIQAIENNMYRAPLYEHKIPETDFLVIRSRQQYFVREMDA
LFVAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSRDTPRRIKMDDIKKAFPSHS
ESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRL
KDAGYGEKFLFTPQDDDDEDMQLKMDDEVKVAPWNTTRAYIQAMKGKCLLQLAGPADPTG
CGEGFSYVRVPNKPTISKEEQEAQPKRTVTGTDADLRRLSLNNAKALLRKFGVPEEEIKK
LSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLSS
NEVLSTDEGESSEEDSSDIEEMGKNIENMLSNKKTSTQLSLEREEQQRHELRKMLMGEAQ
EQESKKGKESKKKDEEEDSPVNNFNAQQGRVLKIYRTFRNPEGKEYTRVELVRKPAVIDT
YIKIRNSKDETFIKQFATLDEAQKEEMKREKRRIQEQLRRIKRNQERERMLGGSSIVNGS
NINNSSNIFDRNNINTPTTTSSTSILPFCNFQSSTSSIPAPKHPKQEISPPKRKKPKLKP
DLKLKCGACGNVGHMRTNKACPLYQNSIATAPVNVAMTEEQEEEIEKQLNTDDQDLVNVD
GTKVKLSSKLIKHAEEVKRRTLLLKVPKEAVNSKKRRKPPTDDHCDYLKRHQRPVNRRRT
DPVVVMSTMLESILNEMRDLPDVQPFLFPVNAKVVPDYHKIIQRPMDLQTIRENLRLKKY
QSREEFLADVNQIVENSTLYNGAKSSLTVAAKRMLDTCVERLGEKEDRLMRLEKAINPLL
DDNDQVALTFILDNVVNNKLKSMTEVWPFMKPVNKKMVKDYYNIVKKPMDLETVSKKVSA
HKYHSRHEFLRDIEQILENCSIYNGKESPLTSKAELLVKVCKDTLDEYDEHLTQLENNIL
LVQKRAMEQADIDSSWLCPDEENYTITEPEYRGSQNSSPDNPYSKQNMDDFDFVDVEGDM
EADMDRNSKKKDVLEEDLQFSSEDEFDEVPFGTDDHSEQNEAETLELSEVREGVVLADDD
SQQAAEAMVQLGNVGFYMGEQQLLQQDESMDVDPNYDPSDFLLAGLPARDDKGENKIQDD
LAVSESDDDTENITSKQEAQQNQQQQLVQPDEDVGGDLWF
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgggggattccgacgaggagaacgagaaggacttggcatctggccttaacatcactggc
ttcctctttggcaatattgatgacaatggtcaattggaggatgatatcttagatcccgat
gccaaacaacatttagcttcgctcagtcgtctcggtctgagttcattcatcaatgaaatg
atgtccaatgacaataatgccgaggaaagagagaccggcaaagtggacgagaagaaggac
caaaacacaactacaaatgacatggatgtcgattacttggcgaaatcacctaccgcgtta
gatttctcggatataaatgagttggcagaagatacgattgatgaaatctccaagagtaat
ggatttgataggaaactagacaaggaaaatgcagattatgatgccgatgacgaggaggtt
gtcagtaaatcagatacacaattgatgccaccaccgccgataccagaggagaaagagaca
ttgactgcagaagaagcagaagcagcgcgtcaacgtaaattagagacacctctcgcttcc
atgctaccatccaagtacgccaatatcaatgtcaccgaattgtttccggatttccgcacc
aataaagtgcttagattctcgcgactgtttggacccggcaagccaagcagtctgccacag
atatggagaggtgtaaggaagcggcgtaaaaagaaaaagcatcatgatatcagagattct
gattctggctctgatcaggatgataaaaaatccaaatttaagggctggatcatgcaatat
ggtcccgagccgagcacggaagcgtgtcgctcggatgatgaaaataagctgttgcgacca
gtagaagataaggaacaaactggtaaaacgggtgaaagcggagagaacggtgacatggga
cctaaagtggctgactggagatttggacccgcgcagttgtggtatgacatgctagaagta
ccagaaactggagatggattcaactatggtttcaagatggttgaaaaagcggaagagcaa
gaaaataaaccagagaccaaagatgaagactttactgatgatgcattcttgatggtatca
caattacattgggaagatgatgttgtctggaatggagacgatataaagcataaggtaatg
cagaaattgaatagtaaaaataacgctgccggttgggtgccatcaagcggcaacagaaca
gcgcaagcctttagtcagcctggaaaaggtgcctctgtcaccgtaacacctaatgttaga
ctagccacttcgcaaattacaacgccattgcacatgcagtctcaaaagaataagatgaat
atgggcaagggaaatcagcagccacagcgggaggaggacgacacctggtattcgatattt
ccagtagaaaacgaggagcttgtatatggtttatgggaggaggaagtcatttgggatccc
gaacaaatgaaaaagataccgaaaccgaaaatacttacgttggatccaaatgacgaaaat
atagttctaggcataccagacgacattgatcccgctcttcttcacaaggacaacggtccg
caacctaaagtaaagatcccgcacccgcacgtcaagaaaagcaagctactgttgggtaaa
gcaggtgttatcaacgtcctcgaagaagacacgcctccaccaccaccaaagtcacctgac
cgggatccgtttaacatatcaaatgatacatattacatgcctaagtcctcggaaactaca
ttgaggctgaaagtcggtggtggcaatttaatacagcatagcactccagtagtggagcta
cgtgttccttttgtacaaacgcacatgggtccaatgagattgagaaactttcacaggcca
ccattgcgaaggttcagctatgggccattggctcttccagcaccgcatggtgtcttgcct
ctgctgaagcatataaaaaagaaagctaagcaacgagagcaagaaaggattgcttccggt
ggaggcgatgtgttcttcatgagaacacccgaggatttaactggacgcgatggcgagttg
gtacttgttgaattctcagaagagcatccaccacttatgaaccaggtcgggatgtgctcc
aaggtgaagaactattacaagagaagggccggcaaagatcagggacctcagacatacaaa
tacggagaaacggcgtacgctcacactagtccttttcttggaattcttacgcctggccaa
agcatccaagccatcgaaaacaacatgtatagggctcctctttacgagcataaaattcct
gaaactgatttcttagttataagatcgagacaacaatattttgttagagaaatggatgcc
ttatttgttgctggacaagaatgcccgctttatgaagtccctggaccaaattcaaagaga
gcaaacaatttcgtacgagattttctacaggtgtttatatatagattattctggaagtca
cgcgatactcctcgacgaattaagatggacgacataaagaaggccttcccatctcacagt
gagagtagtattagaaaaagattaaagctgtgtgccgactttaaaagaactggcatggat
tccaactggtgggtaataaaaccagactttaggttgccaacggaggaggaaatccgcgct
atggtgtcgccagagcagtgctgtgcttatttcagcatgatcgcggccgaacagcgtctg
aaggatgctggatacggagagaagtttttgttcactccacaagacgatgacgacgaggac
atgcagctgaagatggatgacgaggtgaaggtagcgccgtggaatacgacgcgcgcttac
atccaagccatgaaaggaaagtgtctactgcagttggcaggtccggctgatccaactggc
tgtggtgaaggcttcagttatgttagagtaccgaacaaaccgactattagcaaggaggaa
caagaagctcaaccaaaaagaactgtaactggcacagacgcggacttaaggagattgtct
ttgaacaatgcgaaagcgttgctgcgaaaatttggtgtacccgaggaggagatcaaaaag
ttgtcgcgttgggaagtaatcgacgtggtccgaactctatcgacagagaaggcaaaggct
ggcgaggagggcatgacaaagttttcacgcggcaatcgtttctctatcgccgaacatcag
gaacgttacaaagaggagtgccaacgaatcttcgacttacagaatcgcgtgctgtcgtcg
aacgaagtattgagcacggacgagggcgagagttcggaagaggacagttcggatatcgaa
gaaatgggtaagaatatcgaaaatatgttgtcaaacaaaaagaccagcacgcagctatca
ctggaacgggaagaacaacagcggcatgagctacggaagatgctcatgggcgaggcgcag
gagcaggaaagtaagaaaggcaaggagagcaaaaaaaaggacgaggaagaggacagccca
gttaataatttcaatgcgcaacaaggacgtgtattaaaaatctatcgcaccttccgtaat
cctgagggcaaggaatatacacgagttgagttagtgaggaagcccgccgtgattgacacg
tacattaagatccgcaactcaaaggacgagacgtttatcaagcagtttgccacattggac
gaggcacagaaggaagaaatgaagcgagagaagcgtagaattcaggaacaattacgacga
atcaagcgaaatcaagagagagagcgtatgctgggtgggtcatctatagtgaatggcagc
aacattaataattcgagcaatatattcgatcgcaataacattaacactccaactaccact
tcctcaactagtatccttccattctgtaatttccaatcttctacttcttctatccccgcg
cccaaacatcctaaacaggagatatcgcctcctaaacgtaaaaaacctaaactcaaacca
gatctgaaactcaagtgcggtgcttgtggcaacgtcggtcacatgcgcacaaacaaagcc
tgtccgctctatcagaacagcatcgccactgcaccagtcaacgtcgcgatgactgaagaa
caggaggaggaaatcgagaagcagctaaataccgatgatcaggatctggtcaatgtcgat
ggcaccaaggtgaaattgtcctcaaaactcatcaagcacgccgaggaagtgaagaggcgt
acattattgctcaaagtgccgaaggaagcggtaaattcaaagaaacgtaggaaaccaccc
acagacgaccactgtgattatttgaaacgccatcaaagaccggttaacagacgtaggact
gatccagttgtagtgatgtctacaatgttggagagcattttgaatgaaatgagagatctg
ccagatgtgcaaccattcctattcccagtcaatgctaaagtagtacctgattatcacaag
atcatacagcggcccatggatctgcagaccatacgtgaaaatttgaggctaaaaaaatat
caaagcagagaggagtttttggcggatgttaatcagattgtggagaactcgacgctctat
aacggagcaaagagttcattgactgtagccgccaagagaatgttggatacgtgtgtcgag
agacttggcgaaaaggaggatcgtttgatgagactggagaaggctatcaatcctcttctg
gacgacaatgatcaagttgctctcacttttatcttggataacgttgtcaacaataaactg
aaatctatgacagaagtatggccatttatgaaacctgtcaataaaaaaatggtgaaggat
tattacaatattgttaagaagccgatggacctagaaacagtatctaaaaaagtttctgca
cataaatatcacagccgtcatgaatttcttagagatatcgaacagatcttggagaattgc
tcgatttataatggtaaagagtctccgcttacaagtaaagcggagttgctggttaaagtg
tgtaaagatacattagatgagtacgatgaacatctaacgcaactggaaaacaatatattg
ctcgtgcaaaaacgagcgatggagcaggcagacatagattcctcctggctttgcccggat
gaggaaaactacactatcacggaacctgaatatagaggcagtcagaacagttctccagat
aatccatatagcaaacaaaatatggatgacttcgattttgtcgatgtagaaggagacatg
gaagcggacatggatagaaattcgaaaaagaaggatgtgctcgaagaagatcttcaattc
tccagcgaagatgaatttgatgaggtgccattcggtacggacgatcattccgagcaaaac
gaagcggagacattggagttaagcgaggtcagggaaggtgtcgtattagcagacgatgac
agtcaacaagccgcagaagcaatggttcagttgggcaatgtcggtttttatatgggcgag
caacagctgcttcaacaagatgagagcatggatgttgatccaaattacgatccgtcggac
ttcttgttggccggtttaccagctagagatgataaaggagagaataagattcaggacgat
ctggctgtttccgaaagcgatgatgataccgagaacatcacatccaagcaggaagcacag
cagaatcagcagcaacaactagtacagccggacgaggatgtcggcggtgatttgtggttc
taa
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integrated database retrieval system
