Trachymyrmex cornetzi: 108757939
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Entry
108757939 CDS
T11212
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
Organism
tcz Trachymyrmex cornetzi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
HALZ
T6SS_HCP
Motif
Other DBs
NCBI-GeneID:
108757939
NCBI-ProteinID:
XP_018358144
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MSRDLYSSSGVIGPGGGTRSPRSGRRVGELPTVDRSPSRSYASGRGSPLGGRKRGTRSGN
NSPEHLGYGGGYHHHQLGSPYYSRDEDLGSPVMLEERGRSMSTGGGGGGHHRSRSASRPA
MSSSAGMVARYTSLDRASAGVLDHDREFVPIREPSRERSRDRGLYLEDELYGSRSARQSP
NPHMLRDGGGYIGELQHQNNDLQRELGNLKKELELTNQKLGSSMHSIKTFWSPELKKERA
LRKEESTKYSLINEQLKLLNSENQKQSIMVRQLEEELRMRMRGPSVEMQQQMEVLYNENE
HLTREIAILRDTIKELELRIETQKQTLQARDESIKKLLEMLQNKGMGKEEERIMFQQMQS
MAQKQVDFSRMRRLHFAYQTQKSQHTSRILLDELRTEVQRRDQELLAMSAKMKTLEEQHQ
DYQRHIAVLKESLCAKEEHYNMLQADVEEMRQRLEEKNRMIEKKTQAAMQAQQERNRMNT
ELTEIKDHMDIKDRKINVLQRKIENLEDLLKEKDNQVDMARARLTAMQAHHCSSEGALSS
LEEAIGDKEKQMAQLREQRDRAEQEKQEERELHEREIAEYKMKIHTLESEVEKLGARLER
AQAEKDRLEAKLESSQSELGKSKAELDKAASEVGRSGADWEAAKQRLARLELENERLRHD
MERSQGYGRSTLNSSQEMERVQERADKTATELRRAQAELRVTQADNERARAEAATLQEKV
EKSQGEVYRLKARLENAQGEQESLREEYDRAQASVARLHSERDKAIGELEKSQEELERTQ
ATLGKAQLQQDKLQNLLDKTQSEVDKLQEKLDKTQTEVRRMQMEREKQNYDFENLQSQLD
KALGQSTRMQKEREAIQLDVDRLQDKYEKAQVIMQRLQKERDSFQEEMEKMHERIEFQQN
QIAKMQREKENVLSELDLVKERWEKAHNTHQKLTLERDDALTEIQILKEKLEKAQYSMNK
AHEERENTTKEFEKMLEKYDRSQSEVYRLQNRIDVMEADKDRLELETEKQQMLATKSREE
SRKAQEELARVQEMYDRAALQLGRTKEHEEKSKENIDRLSVDLEMVRERYEKSQIELRRL
QNEREKLVADNERISFELERAHSQLNKAQAATEKTQEELARMQLEIEKMYEKHDRQQTEV
RKAQGEAERLRSEAENSREEVERYATRFGKYQESQERQKEEHEWAKLEVERLRDRLEKAL
AELERARKAEQDASRLRADLERAEGVRGKYQYEQEKWQSEGSRLQQEVDKLRERLEGREA
ELKRTQSNHAELEAKLHEAQLQLERARDETGKATAQQERNRSEIERARIEAEKIRDRHDK
VKIRSDALEADNEKLRVEIVRLERLMQTEGKTRSESASIEVERLRASLDKAIVARDQVEL
EAGRLAKELEKAHLQTAKYQEATEATKKEVERIAADLQLLRDERDALRQELRRVQQQQQQ
QQQQQQLAGNEEHARMQYELQLAQRERDKMAAILENREKHSEKMKEKWEADAKQLQVERD
QLVIQLEKSQEMLVNFQQELSANEAELERQREEARRLQQRAHAQTPDRAAKEALDAQMRE
VQRLQQQVQSVQQAQQKERQRAEQAEKRVQELQKQLASRGTETVQADAAQLEQWRKLCET
ERQRADTAEREAGDLQKRIQTTERQLHAHQQQIQQMQVTMQQQQQQLQQQQQLQPAQQNG
QEVVRLRKELDRAREEIQQATVERERFQAQLEMLCQELEKNQVDLHEANKKLQAGAAKAG
ADTIQERKQMEDQRRQLDEQRRQMEERAKTVDQKARTTEEKERTLQNLDQDLKKRKARMD
QLEQQLQKSGGAPDKRLAEMQKALEIAERDLEKAKEESGRSAAETERLLQLVQMTQEEQN
SKEKQIRDLQEALKTAQAKLKQATTAQQEAGPAGFLKSLF
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggatctttactcgagcagtggcgtgatcggtccaggtggtggcacacgttcg
ccacgcagcggtcgtcgcgtgggcgaactgccaaccgttgatcgcagtccgtcgcgaagt
tatgccagcggtcgtggaagtccgctcggtggtcgtaaacggggaactcgcagtggcaac
aattcgccggagcacttaggctacggcggaggctaccatcaccatcagctgggcagcccg
tactactcccgcgacgaggacctcggcagtcccgtgatgctcgaggagaggggtaggagt
atgtcgaccgggggcggtgggggcggacatcaccgatccagaagcgcctcgagacccgcc
atgtccagctcggcgggcatggtagcgcgttacaccagcctcgatcgtgcctccgctggc
gttctcgaccatgatcgggaattcgtgccgatacgcgagccgagccgcgaacgtagccgc
gatcgcggactctacctggaggacgagttatacggctccaggtcagcgcgtcagagcccg
aatccgcacatgctgcgcgacggcggtggctacatcggcgagctccaacatcagaacaac
gatctgcaacgtgagctcggtaacctgaagaaggagctcgagttgacgaatcaaaaattg
ggcagctcgatgcacagtatcaagaccttttggagtccggaactgaagaaggaacgggcg
ttgcgcaaggaggagagcaccaagtacagcctcatcaacgaacaacttaagctgctcaac
tcggagaatcagaaacaaagcataatggttcgccaattagaagaggagcttagaatgagg
atgcgtgggccgagcgtcgagatgcagcaacaaatggaagttttgtataatgagaatgag
catctgactcgcgaaattgccatacttcgtgatacgataaaggagctggaattaagaata
gaaacgcaaaaacagacgctgcaggctcgtgatgagagtatcaagaagctcctcgagatg
ctccagaataaggggatgggaaaagaggaggaaaggatcatgttccagcagatgcagtcg
atggcccagaagcaggttgacttctcgcggatgagacgactgcattttgcataccaaacg
caaaaatctcaacatacgagtcgaatattgctggacgagctccggacggaggtacagcga
cgagaccaagagctgctggcaatgtcggcgaaaatgaagacactcgaggagcaacatcag
gattaccaaagacacatcgctgtactcaaggaatctctctgcgccaaggaggaacattat
aatatgctgcaagctgatgtcgaggagatgcgacagcggctcgaggagaagaaccggatg
atcgagaagaaaacgcaggcggcaatgcaggcgcaacaggagcgcaatcgcatgaacacc
gaactgacagaaatcaaggatcacatggacatcaaggatcgcaagatcaatgttctgcag
cgcaagatcgagaatctggaggacttgctgaaggagaaagataatcaagtcgacatggcc
agggccaggctgacggcaatgcaagcgcatcattgcagcagcgaaggtgcacttagtagt
ctcgaggaggcgattggggataaagagaagcaaatggcacaattacgtgagcaaagggat
cgagcagagcaggagaaacaggaagagagggaattgcacgaaagagaaatcgccgaatac
aaaatgaaaatacatactttagaatccgaggtcgagaaattaggcgcgcgtttggaacga
gcgcaggcggaaaaggaccggttagaagcgaagctcgagagctcacaatccgagcttggc
aagagcaaggctgagctggacaaagccgcttccgaggtcggacgtagcggcgcagactgg
gaggcggcgaagcagcggctggccaggttggaactggagaacgaaaggctgcggcatgat
atggaacgatcgcagggttacggtagaagcacactgaactcgtcccaggaaatggaacgc
gttcaggaacgtgccgacaaaacggccacagaattaaggagagcccaggctgagctgagg
gtcacgcaagcggacaatgagagggcacgtgccgaagctgcaaccctccaagaaaaggtg
gagaaaagtcaaggcgaagtgtacagacttaaagcgagactcgagaatgctcaaggcgaa
caggaaagcctgcgagaggagtacgatcgagcacaggcatctgtggcccgtcttcactcc
gagagagataaggcaatcggcgaactcgaaaaatcacaagaagaactcgagcgcacacag
gcaaccctcggtaaggcgcaacttcagcaggacaagctgcagaatttattggacaagacg
caaagtgaggtcgacaagctgcaggaaaagctcgataagacgcagacggaagttcgtaga
atgcaaatggaaagagaaaaacagaactacgatttcgagaatctgcagagccagcttgac
aaagcattaggacagtcaacgagaatgcagaaagagcgggaagcgattcagcttgatgtg
gatcgactacaggacaagtacgaaaaagctcaggttataatgcaacgactacagaaggaa
cgagatagcttccaggaagagatggagaagatgcacgagaggatagaattccagcagaat
cagatagccaagatgcaacgggagaaggagaatgtactctcagaactcgatttggtaaag
gagagatgggagaaggcccacaatactcatcagaaattaacgttggaacgagatgatgcg
ctgactgaaatccaaatcctaaaggagaaactggagaaggcacagtattctatgaacaaa
gctcacgaggagcgagaaaacactaccaaagaatttgaaaagatgttggaaaaatacgat
aggtcgcagagcgaggtgtatcgccttcagaaccgtatcgatgttatggaggcggataag
gatcgactcgagctggagacggagaagcagcagatgttggcgaccaagtcacgtgaggaa
tcgcgtaaggctcaggaggaactagctcgagtacaggaaatgtacgatcgcgcggcgctg
caactcggtcgtacgaaagagcacgaggagaagtcaaaggagaacatcgatcggctgagt
gtagatctcgaaatggtgcgcgagcgctacgagaagtcgcagatcgagctgcgacgattg
caaaacgagcgcgagaagttggtggccgacaacgagcgtatcagcttcgagctggagcgc
gcgcactcccagcttaacaaggcgcaggctgcgacggagaagacgcaggaggagcttgcg
cgtatgcaacttgagattgagaagatgtacgagaagcacgatcgtcagcagacggaggtg
aggaaggcgcagggcgaagcggaacgactgcgttctgaggcggagaactcgcgcgaggag
gtcgagaggtatgcaacacgtttcggcaagtaccaggagagccaggagcgacagaaggag
gagcacgagtgggcgaagctggaggtggagcggctacgcgaccgtttggagaaggcactg
gcggaactcgaacgcgcgcggaaggctgagcaggacgcctcgaggctgcgcgccgatctg
gagcgtgcggaaggcgtgcgaggtaaataccagtacgagcaagaaaaatggcaaagcgag
ggtagtaggctacaacaggaggtggacaaactacgcgagcgattggaaggccgtgaggcc
gagctgaagaggacgcagtcgaaccacgccgagctcgaggcgaagctgcatgaggcgcag
cttcagctcgagcgggcgcgcgatgagaccggcaaggctacggcgcagcaggaacgcaat
cgttcggaaatcgagcgtgcgcgaatcgaggccgagaagatacgcgaccgacacgacaag
gtgaagatacgatccgatgcgctcgaggcagacaacgagaaactacgtgtcgagattgtg
cggctggagcggctgatgcagaccgagggtaagacgagatccgagagcgcaagtattgaa
gtagaacgtctacgagctagcctggacaaggcgatcgtggcgcgtgatcaggttgaactt
gaggctggcagactcgcgaaagagctcgaaaaagcgcacctgcaaactgctaaatatcag
gaagctaccgaggctactaagaaggaggttgaacgtatcgctgcagatttgcaactgctg
cgggacgaacgcgatgcgctacgccaagagttgcgccgcgtgcaacaacaacaacagcag
caacagcaacagcagcagctcgctggtaacgaagaacatgcccggatgcagtacgagctg
cagctggcgcaacgtgaacgcgacaagatggcagcaatcttggagaaccgggagaaacac
tcggaaaagatgaaggagaagtgggaagcagacgcgaagcagctgcaggtagagcgcgat
caactggttatacaactggagaagtcgcaggaaatgctggtcaacttccagcaggagctt
agcgcgaacgaggccgagctcgagcgtcagcgcgaagaggctcgccgtctccaacagcgt
gcccacgcgcagacacccgatcgcgccgccaaggaggcgcttgacgcgcaaatgcgcgaa
gttcaacggctgcagcagcaggtacagagtgtacagcaggcgcagcagaaggagcgacag
cgtgccgaacaggcagagaagcgagtgcaggagctgcagaagcagttggcgtcgcgcggc
accgagacggttcaggctgacgcggctcagcttgagcagtggcggaagttatgcgagacg
gagcggcagcgggcagacactgctgagcgtgaggctggtgacttgcagaagcggatacag
acgacggaacgacagttacatgcgcatcaacagcagatccaacagatgcaggtcaccatg
caacaacaacaacaacagctgcagcagcaacagcaactgcagcccgcgcaacaaaacggt
caggaggtcgttaggctgcgaaaggagctggatcgcgcgcgcgaggagattcaacaggcg
acagtggagcgcgagcggttccaggcacagctcgagatgctgtgccaggaactggagaag
aatcaggtggatttgcacgaggcgaacaagaaactccaagctggcgccgcgaaagctggt
gccgatactattcaagagaggaaacagatggaggatcaaagacgacaattggacgagcag
agaagacagatggaagaacgagcgaagaccgtagatcagaaagctaggacgacagaggaa
aaggagaggacgctccaaaatctcgaccaagacctcaaaaagagaaaggcgagaatggac
caactggagcaacaattacagaagagtggcggagcgccggacaagagattagcagaaatg
caaaaggctctcgaaattgccgagagggatttggaaaaagcgaaagaagaatcaggcagg
agtgccgccgagaccgagaggctattgcagctcgtgcagatgacacaggaggaacaaaac
tcaaaagagaaacagatcagagatcttcaagaagcactcaaaaccgcacaagccaagttg
aaacaagctacaactgcacagcaagaggcgggacccgccggattcctaaaaagcttgttc
taa
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