KEGG   Trachymyrmex cornetzi: 108757994
Entry
108757994         CDS       T11212                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03030  DNA replication
tcz03410  Base excision repair
tcz03420  Nucleotide excision repair
tcz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108757994
   03410 Base excision repair
    108757994
   03420 Nucleotide excision repair
    108757994
   03430 Mismatch repair
    108757994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcz03032]
    108757994
   03036 Chromosome and associated proteins [BR:tcz03036]
    108757994
   03400 DNA repair and recombination proteins [BR:tcz03400]
    108757994
DNA replication proteins [BR:tcz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108757994
  DNA Replication Termination Factors
   ELG1-RFC complex
    108757994
Chromosome and associated proteins [BR:tcz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108757994
DNA repair and recombination proteins [BR:tcz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108757994
  Check point factors
   HRAD17(Rad24)-RFC complex
    108757994
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 RuvB_N AAA_14 AAA_11 AAA_5 DUF815 AAA_19 ResIII AAA_24 AAA_30 AAA_7 DEAD RCF1-5-like_lid AAA_13 AAA_assoc_2 ATPase_2 PhoH TniB Mg_chelatase FtsK_SpoIIIE TIP49 bpMoxR nSTAND3 MTR4_beta-barrel AAA_3 AAA_25
Other DBs
NCBI-GeneID: 108757994
NCBI-ProteinID: XP_018358200
LinkDB
Position
Unknown
AA seq 327 aa
MTSSNEQVNLPWVEKYRPKSLDELISHETIIKTINKYIDENQLPHLLLYGPPGTGKTSTI
LACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYKSAFKLIILDEADAM
TIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQVIPRLNHVI
EAENLKVTEDGKQALITLSGGDMRKVISVLQSTWFAYGAVNLENVYNCVGHPLPRDITSI
VNWLLNESYDTCYKKIQELKLNKGLALQDILTEVHSYVIKIDFPDQLFIDLLCKMAEIEK
RLASGCRDNIQLNSLISAFYSVRDIET
NT seq 984 nt   +upstreamnt  +downstreamnt
atgacgtccagcaatgaacaagtaaatttaccatgggtcgaaaagtatcgtcctaaaagc
ctggatgagcttatttcccatgagacgataataaagacgataaacaagtacattgatgag
aatcaactgccgcatcttctcctttatggaccacctgggacaggaaagactagtactata
ctggcgtgtgctcgtaaactctatactccagctcagtttaattcaatggtattagaatta
aatgcttccgatgatagaggtataggcatcgtgcgaggccaaatcctgagttttgccagt
acaggcactatgtataaatctgcgtttaaattaattatcctggatgaagccgatgctatg
acgattgatgctcagaatgcactcagaagaattattgagaaatacacggataatgtgcgt
ttctgtattatatgcaactacctcagcaagattattccagctctgcagtctcgttgcacc
aggtttagattcctacctcttgcagcggaacaagtaataccaagactgaaccacgttatt
gaagcagagaatttaaaagttacggaagacggcaagcaagcattaataacgttaagtggt
ggtgatatgagaaaagtaataagcgtacttcaaagcacatggtttgcttatggtgctgtg
aacttagagaatgtgtataattgtgttggacatccgttaccaagagacataactagtatt
gtaaactggttgctaaacgagtcttatgatacatgctataaaaagattcaagaactgaag
ttgaataagggacttgcgctgcaagatatattaacagaagttcattcatatgtaattaaa
attgattttcctgatcagttatttattgacttactatgcaaaatggcagagatagagaaa
agattggcttctggatgtcgcgacaacattcaattaaattctcttatatctgcattctac
agtgttcgcgatattgaaacgtga

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