Trachymyrmex cornetzi: 108758390
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Entry
108758390 CDS
T11212
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108758390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108758390
Enzymes [BR:
tcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
108758390
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
108758390
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108758390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
DSPc
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
DNA_ligase_A_M
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Tc-R-P
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
PTP-NADK
SGL
Tricorn_2nd
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
108758390
NCBI-ProteinID:
XP_018358830
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSSENRVGRGVPPRWLDCPRKAMRLIQGKFLAFKTPLSSAYDSQVPEGCRFTVDMFFENL
KSQKLKMGLWIDLTNTSRFYDKDTIEDYNCSYVKLQCRGHGETPSEEQTRAFVQLCSSFI
AHNPLEIIGVHCTHGFNRTGFLIISYLVEIDNTSVDAGLAEFATARPPGIYKADYIKELY
KRYDDEADAPPPPARPAWCLEYDDSNIPDTDEGPSTENEDCQDEKGKKKRREIFNKNPIF
MAGVPGVTPILEKKKLFGIQRRVQDICGWKDSGFPGSQPVSMDCDNIMLLHTKPYRVSWK
ADGTRYMMLVQGDGEIFFIDRENSVFEATGLTFPHVRENRNLRDTLMDGEMVIDKDRGKN
IPRYLVYDVIMYDGQDVSKLPFHPDRYSIIENKIIAGRLRAMKEGRLIKEREPFSVRLKY
FWDVTQSKNLLGEKFAKQLSHEPDGLIFQPAKEKYNSGVCIEVLKWKPLSLNSVDFKLRI
VTESGMGILPRKIGHLFVGGLSTPYGTIKITKHMRDLDNAIVECKFENGQWVFMRQRIDK
SFPNSVKTAESVCKSINKPVTKERLLDYIEKYRFARDDSELMPPPNKKPNLSXINRTVLL
WYTKDFTSKDRKSLRINIEFDHATLIRWSPDGKAFIIHKAVANAIEVYKIAKKSDGHLAS
ATKALEFPQHHTEDVVGMDIACTGKYIITCSKVNDLIIWDLKGQTLAMVEMHLGSTYRAR
ISPCGRFVAASGFTPDVNVWEVVFSKSGEFKTVAKAFDLAGHSSGVHDFSFSADTSHMAT
VSKDGTYRFYNTKIEFQKGEDPHVLMTGTWNTTAPASLALSPNAEVLVIAHGSSISFYST
ITGVLDTTIEDIFLGPITCLVFDAMGEYLLAAGDKHIKIFRNVTGYRTAIESAKRKLEQR
QTQATKERLEKMIRDNKDLLEKMGEKCSE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgaaaacagagttggtcgtggagttccacctcgctggctcgattgcccacgc
aaggcgatgaggctgatccaaggcaagtttctagcttttaagacgcctctgtcttcggcc
tacgacagccaggtgcctgagggttgtcgattcactgtagatatgttcttcgaaaatctg
aaaagtcagaaactgaagatgggcttgtggatagatttgactaacacgtcaaggttttac
gataaagataccatagaagattacaattgtagctatgtgaaattgcaatgtcgtggtcat
ggcgagaccccgtccgaggagcagactcgagcctttgtacaactctgtagtagtttcatt
gctcacaatccattggagatcattggtgtgcactgcacacatggttttaacaggactggc
tttcttataatcagttacttagtggagatagataataccagtgtcgatgctggcttagca
gagtttgccactgcaagacctcctggaatttacaaagccgattatataaaggagctgtat
aaacggtacgacgacgaggcagatgctccacctccacctgcgagaccggcgtggtgtttg
gaatatgatgattccaatattccggacacagatgaaggaccaagcacggagaacgaagat
tgtcaggatgagaaaggcaagaagaagagacgtgaaatttttaataaaaatccaattttt
atggctggcgtacctggtgttactcctatcttagaaaaaaagaaattatttggaatccag
aggcgagtccaggacatctgcggatggaaggattcaggattccctggttctcagcctgta
tccatggattgtgacaatataatgctgttacatacaaagccatatagagtatcttggaaa
gctgatggcacaagatacatgatgttagtacaaggtgatggagagatattttttatagat
agggaaaacagtgtttttgaagcaactggactgacatttcctcatgtacgagaaaaccga
aatttgagagatactctgatggatggtgaaatggtaatcgacaaagataggggcaaaaat
attcctagatatttggtttacgacgttatcatgtacgatggacaggatgttagtaaatta
ccgttccatcctgatcgttactccattatcgaaaataaaataatcgctggtagactaaga
gctatgaaggagggacgattaataaaggaacgagaaccattctctgtacgattgaaatat
ttctgggacgtaacacagagcaaaaatctgttgggcgagaaattcgctaaacagctttct
cacgaaccagatggcttaatatttcaacctgccaaggaaaagtacaactcgggagtatgc
atcgaggtcttaaaatggaaaccattgtcgttaaactccgtagattttaaactgagaatt
gtcacggaatcgggcatgggaattctgccgcgaaagattggtcatctttttgtaggagga
cttagtacaccgtacggtacaataaagattaccaagcatatgagagatttggacaacgcg
attgtcgagtgcaaattcgaaaatggtcaatgggtcttcatgcgtcagcgaatagacaag
tcgtttcctaactccgttaaaactgccgagtctgtgtgcaaaagcatcaacaaacccgtt
acgaaggaacggcttttagactatatcgagaaatacagatttgcacgagatgattcagaa
cttatgccaccaccaaacaaaaaacctaatttatcttagataaatcgtactgtgttgttg
tggtacacgaaagacttcacatcgaaagatcgcaaatctctgcgtattaacatagaattt
gatcatgcgactttgatacgctggtccccggatggaaaagcatttattattcacaaggcc
gtggctaatgccatcgaggtatacaagatcgcgaagaaatcggatggtcacttggcctct
gcgactaaggctctggagtttccacagcatcatactgaggatgtcgttggaatggatatc
gcgtgcactgggaagtacatcatcacgtgcagtaaagtgaacgatcttattatttgggac
ttgaaaggacagacgctggcaatggtggagatgcatttaggatctacttatcgtgcgcgc
atatcaccttgcggccgattcgttgctgcctcgggttttacaccggacgtgaacgtatgg
gaggtggtcttcagtaaatccggagagttcaaaacggtggctaaagcgtttgacctcgcc
gggcactcgtccggggttcacgacttcagtttcagcgccgataccagtcacatggctacc
gtgtccaaggatgggacgtatcgtttctacaatacaaaaatcgaatttcaaaaaggagaa
gatccacacgttttgatgactggtacctggaacaccactgcaccagcaagccttgcctta
tctccgaacgcggaagtccttgtgatcgcccatggatcatctatatctttctactccact
attaccggtgttctggatactaccatagaagatattttccttggtcccataacatgcctg
gtatttgatgctatgggagaatatctgttggctgcgggcgataagcacatcaaaattttc
cgcaacgtcacaggatatcgaaccgcaatagagtctgctaaacgtaaactggaacaaagg
cagacgcaggcaacaaaggaacgtttggaaaaaatgattcgcgataacaaggatttgctt
gagaagatgggcgagaaatgttcagaatga
DBGET
integrated database retrieval system
