Trachymyrmex cornetzi: 108758423
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Entry
108758423 CDS
T11212
Name
(RefSeq) heparanase-like isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz00531
Glycosaminoglycan degradation
tcz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108758423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tcz00536
]
108758423
Enzymes [BR:
tcz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108758423
Glycosaminoglycan binding proteins [BR:
tcz00536
]
Heparan sulfate / Heparin
Enzymes
108758423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108758423
NCBI-ProteinID:
XP_018358901
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSYFVSNDWGKGRYQELSDSRVRGTGPAVRSILCCTALGLCSTLLILSLWSSNIQVPIHL
YVFHFDRQQPVLHMVSDKFLSFGLDTSLLRRMNELPVGQQKFINLARHLSPAYVRVGGTS
ADCLTFVQDQMEQNSSEKILSPVDDQDISNFTISGADLLAIYDFTVKSELRMIFDLNVLL
RNPDGSWNNSNAQKIIAFTKNQGMTLDWQLGNEPNSFKHVFNVTIPATELAKDYDNLRQL
LNEAGYVDSILVGPEVNHVGDSNEMGELYVKAFLSSQKNTVNYVTWHQYYLNGREAKVND
FVAPSTFNWLPAQINSMRQFIAESGKDVSMWLSETSTAFGGGAPGLSDRFVAGFLWLDKL
GYSASAGLDVVTRQSLFGSNYAMVSPNLTPNPDWWVSVFYKQFVSEKVLKLSRPDNFGCV
RLYAHCTSKNALISRVPAVTIYGMNIDKTAAYVHISGLFVQNSKTMISYYSLTADHLQSS
EIKLNGEAEALKLRPNGDLPPFRPVILDPTNPVLLPPYSMVFMIIHGTNVPACSA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttcgtgagcaatgactggggcaagggccggtatcaggaactgagcgattcg
cgtgtacgtggtacaggcccagctgtacgttctatactctgctgcactgcattgggtcta
tgctcgacgctgttgattctctcattatggagctccaatatccaagttccaatccacctc
tatgtattccattttgacagacagcagcctgtattacacatggtttccgacaagttcttg
tcgttcggtctcgatacgtccttacttcgaagaatgaatgagttacctgttggacaacag
aaatttattaatttggcccgtcacttaagtcctgcttatgtcagagtgggcggaacctct
gcggattgtttgacatttgttcaggatcagatggaacaaaactcgtccgagaagatcctt
agtcctgtggatgaccaggatatcagcaactttactatctccggcgcggatttgcttgct
atctacgattttacagtgaagtcggagttacgaatgatctttgatctgaatgtattgctc
agaaatccagatggatcctggaataacagtaacgcacaaaagattatcgcattcactaag
aatcaaggcatgacgttagattggcaattgggaaatgaaccaaattcctttaaacacgtg
ttcaatgtgacaattcctgcgaccgaacttgcgaaggattacgataatttaaggcaattg
ctaaacgaagcaggatatgtcgacagcattctcgttggaccagaagttaatcacgtcgga
gattctaatgagatgggggagctgtatgtcaaggcatttttgagtagccagaagaatact
gtgaattatgtcacttggcatcagtattatctgaatggacgagaggctaaagtcaatgat
ttcgtggcaccttccacgttcaactggttaccagcgcaaatcaattccatgagacaattt
attgccgagtcggggaaagatgtttctatgtggctgtccgagaccagcactgcatttggc
ggaggtgcgcccggattgtccgacagatttgtagccggatttttatggttggataaattg
ggatacagcgctagcgcgggattagacgtcgttacaagacaatcattattcggctcgaat
tatgctatggtatcaccgaatctcacacccaaccctgactggtgggtcagcgtcttttac
aagcaatttgtttcggaaaaggttttgaaattgtcgaggcctgacaattttggctgcgta
cgcttgtacgcgcattgcacgtcgaaaaatgcgctgatttccagagtaccggctgtcaca
atctacggaatgaatatagacaaaactgcggcctacgtacatatttcgggattatttgta
caaaacagtaaaaccatgatttcgtattactctctaactgctgatcatttgcagtcgagt
gagataaagctgaacggtgaagctgaagcgctaaaattgcgaccgaatggtgatttgcca
ccgtttcgacctgtgatattagatcctacaaatcccgtattattaccaccatattctatg
gtgtttatgataattcatggtaccaatgttcctgcatgttcggcatga
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