Trachymyrmex cornetzi: 108758503
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Entry
108758503 CDS
T11212
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcz03000
]
108758503
Transcription factors [BR:
tcz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108758503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108758503
NCBI-ProteinID:
XP_018359000
LinkDB
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Position
Unknown
AA seq
512 aa
AA seq
DB search
MHTMETDMKGGSLHAQMPPHPHQGVSPMGHHAGMSPYGSLSTIVHNSALSGSPPSAGGLG
LGLQHHHQTSQHHYAMSAAAVAAAAVQQQQQQQQQSMHAMAVQQSAQQQQHHAHQQSQQQ
QSQSQQHHQANNHSNPNNPNNPNNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGAEWKLLSEGEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDKF
QLGGAVAGVGGMLGVDQRQVGTSGGPQQPQLPRDVYQMPNGYMPNGYMMPDPTTYQQHVA
YSSHMSTAATAGSTVGYPRYDSMGHHLGGSSPSPINMNGYGGYGGYGATVPGGSPSPYHQ
AQTGSQISSSHSPSGSSIKPEPTSPASGGIHTPTPTGGPTTTGAAGPAGQVKREYMGQQQ
ASQQTQGDLRQMISMYLPQGIEQGVVQHGGSVYPPGPSPDSLTQHHTMQPISHMSDSDRK
MLNPETGCYSESVRAWDWNATGNVRVQESWPT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggcggcagtctgcatgctcagatgccaccgcat
ccacaccaaggtgtatcgccgatgggacatcatgcagggatgtctccttatggatcttta
agcacgatagttcataattctgcattgtcgggaagtccacccagcgcgggtggcttgggt
cttggtcttcagcatcatcaccaaacttctcaacatcattacgcaatgtcagctgccgcc
gtcgccgccgcggccgtacaacagcagcagcaacagcagcaacagagcatgcacgcaatg
gcggtccaacaaagtgctcagcaacagcagcatcatgctcatcagcaatcgcaacagcaa
caatcgcaatcacagcagcatcatcaggctaataatcatagcaatccaaataatcccaac
aaccccaacaattcttccaacgccaagaataataacatggatcgcgtaaagaggccgatg
aatgccttcatggtatggtcgcgtggacaacggcgcaagatggctcaagaaaatcctaaa
atgcacaattctgaaatatcgaaacgccttggtgccgaatggaaacttctcagcgaagga
gagaagcgtccgtttatcgacgaagcgaagcggctgcgcgctgttcatatgaaggaacat
cctgattacaagtatcggccgcgccgcaagacaaagacgctcataaagaaagacaagttc
cagctcggcggagcagttgctggagtcggcggaatgctcggcgtggatcaacggcaagta
ggcaccagcggaggaccacagcaaccgcaattgccgcgtgatgtatatcagatgcccaat
ggatacatgcccaacggttacatgatgcctgatccgacaacgtatcaacaacacgtcgcg
tatagcagtcacatgagtacggccgcaaccgctggctcgactgtcggctatcccaggtac
gattccatgggacatcacctcggtggcagcagtcccagccctatcaacatgaacggctat
ggtggatacggcggatacggtgctactgtacctggcggatcaccatcaccttaccatcaa
gctcaaacgggttctcagatatccagtagtcatagtcctagtggcagcagcataaagccc
gagccgacgagcccggcgagtggtggcatacacacgccgacgccgacgggcggcccaacg
acgacgggcgcggctggtcctgccggccaggtcaagagagaatacatggggcagcagcaa
gcgagccaacagacgcaaggcgatctccggcagatgatctcaatgtatctgccgcaaggc
atcgagcagggagtcgtgcaacacggtggaagcgtctatccgccgggtccatcacctgat
tctttgacgcagcaccataccatgcagcccatttcgcatatgtcagatagcgatcgtaaa
atgttgaacccagagactggctgctactccgaatccgtacgagcatgggattggaacgcg
acgggcaacgtacgcgtgcaggaatcctggccgacgtga
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