Trachymyrmex cornetzi: 108758754
Help
Entry
108758754 CDS
T11212
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcz03000
]
108758754
03036 Chromosome and associated proteins [BR:
tcz03036
]
108758754
Transcription factors [BR:
tcz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108758754
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108758754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
108758754
NCBI-ProteinID:
XP_018359340
LinkDB
All DBs
Position
Unknown
AA seq
2382 aa
AA seq
DB search
MSWKKIIKPTSKELAFREKHFHDIRIIKDRQIKCTACGNELNIQTNRIFSHPFIGILQCE
ICWNELKNIQTRFDEDKARHYCHICGIYNNRKLYECCNKNCNSAFCKGCIKRNVSLSLLD
VEKDDWECFICNPKPLWDLRAICAAVIDSLSTKSNKGRSNKIEKKILPSQIQRINETKYV
QNLLDSMCDREDNDSSEESFVSARFARKNRHTNYEVNSLQKKKKNALDITDSSSEDSFCK
RKNLSILSKRNNQNKNESDQKTKCVGDFYSARKVSIIKEKKMSKKNKISSDSSDDSSDVS
SNKIRRQRIIKHNRSKKIIKSKTNVYSSDSESDENNTDTASNVSKRISKGTRQQNKKMDN
SHNTRSRDKAKKNNSTGESEDEKYIKRNTRKRSETSQLMSHSNDERKRDKSSKQRLSNIQ
EDNSDNSSSKEFQKIKLQKVNRNIRQLANLEVDHTKTPKNSTNNSDKDINGQSNKKNLLD
MKKILMDCKKACSDFQMHIESIEHLYGKEDEEKLVLKSTEKIDRLRMILEKKHKNLLTSY
QVWSRNRKKSATKRSNKVVTDSEQSEEKRDNCIEDEDKHVFDDKQDGNKDVSECDSEEIF
SADETRSPQKMQAARCKVDLARTEKSLNNNETDTDDEDRMSINKSKINNDKNNVDVQDDS
TTSPTLRLKEKNISIERSSEKQLSSEYNKNNNETQSSDENETEIEDSPSKSSSKKMVLEN
DETNRLKKNIIDESMDMFDTSPEDAEKNRTEVETNCDKEELLQTSKDKLLDPCENSLQNK
ISDQKERTFLEEEEDLSNQSNQEKMAAISVTNKEVYDSKASRKMNIDDNESLDDAEALAK
EALLADSDTSDTSNKNVAKLTEVSTDDETTNRIEKKNELEDIDSDVNSVSTIKLSTLKKN
ANTDAEKDVITEAEIKAEKKSNDQSDERSRKEMSSSEDENIKKEKAAKKALLESDDSIPL
RESRESVDSFKKFESDSSKKNAEAKRLLLASSSEDSSSELTLSEMINVSKNIKRNREPET
DREHNVSRLKKRRLKLNENYYYKNDKKLRMSCKVHLERLSTEILKRYSHALKKSREYLEH
KEFKSLVNLDKLEKNHKKNIKKDSDSSMDNDSSSKISKRSNKKENTKIKEESLMDHLKKI
ENGDTVATVETDLYTEDQSIYQKQNVDDTISNDALISEADRLAKENLLNSSDSDEEEVIL
DSDSSIKNDDTNGKKENKKKQYQKKSEEQTSKNDNEKDKSAWRRDKILTMKLSDSDSDAE
REKWENKQEKLANKSKNNNSDSGEEKSFKSKRKKKKTGRRIIDSDSDIKITDVDSDNSSN
TSSPFITLYSNDSDDTRKEKEQLKRNKRRKRGDSSGTDSSLSEKKSKPKRKRIKKMASDS
DSSDVEMLNSQESSPGKSGRKNIRKVLKDKQVTDDTKQAAKEEEERLKRIAERQAVYNEM
FEIRLAGEEKVDKLVLDFDTETKQELVTVHKELVKHLKPHQAQGIKFMWDACFESLERVK
STSGSGCIIAHCMGLGKTLQVITLTHTLLTHEATNVKTVLVVCPLSTVLNWRNEYNTWLK
DLDDFEVYELTKFKKNFERKYQLQRWQKTGGVMIIGYEMFRNLTSPNRNIRKAMKEVMLE
CLVDPGADLVVCDEGHLLKNEDTALSKCMRNVKTLRRIVLTGTPLQNNLIEYHCMVQFAK
PNLLGTKKEFSNRFVNPITNGQFHDSTAYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPF
LPPKQEYVIFVRLTDIQVKLYQYYLENVARRLSGQGRTLFADFQALQRIWTHPLVLRLNA
EKIEKANEKKELSDSEGSLKDFIDDDTDVESSSSSSNSNDSNNDSDVQAIDEKDNANVPK
RNTRNNPVEEEPMEQIKETSESEVATEWWLQFVQSEHFEDMRESAKLLLLFAILKESEQI
GDKVLVFSQSLYSLTLIEEFLRRIDDQTQKDESCDTLDNHTGSWSLGLDYFRLDGQTSPE
NRNLWCKIFNRPTNIRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRIYR
FGQKKPCYVYRFLAAGTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNHNLNELYTFEGY
DKEKPTLNLPKDRLLAEIFLKFKDIVENYHEHDSLLENKAEEELDEEERKQAWLEYEEEK
KGKPLINSMANTALMMNQNNAFLQQCMMMRNSMQPNMMSQNMFEYNSFQQLIRKDVRYED
YPNATPEQQKMMTNRAIVEMYNYWEKQATLYNKQPVQPVQNPFLPNFQQRPQAPNFQQRP
QVPVTSNMHPQVTQLGHLLSGQSMNYVNANKSVQLNDTQTGDLIPNLFSKQNTSSNNNIG
GTMDQDIIEVVPTTSTGITRQSGMSSVQIAAQPIDNSKIQEE
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggaagaaaataatcaaaccaacttcgaaagaacttgcttttcgtgagaaacat
tttcatgatattagaattatcaaagatagacaaataaagtgtaccgcctgtggtaatgaa
ttaaatatccagacaaatcgaatcttttctcatcctttcattggaatactgcagtgtgag
atatgctggaatgagttgaagaatatacagaccagatttgatgaggataaagctaggcat
tattgtcatatatgcggcatatataacaacaggaaattatatgagtgttgtaacaaaaat
tgtaactcagcattttgtaagggatgtataaagagaaatgtaagcctatcgctattggac
gtggaaaaggatgattgggaatgttttatatgtaatcctaaaccactttgggatctaaga
gccatatgtgctgctgtaatagactctctttccacaaagagtaacaagggaagaagcaac
aagattgaaaaaaaaattttaccatctcaaatacaacgaataaacgaaacgaaatacgta
caaaatctcttggatagtatgtgtgacagagaggataacgattcttccgaagagtcattc
gtttctgcaagattcgcgagaaaaaatcgtcatacaaattatgaagtaaactctcttcag
aagaaaaagaaaaatgcattagatataacagattcgtccagcgaggattcgttttgtaaa
cgcaaaaatttatctatcctttctaaaagaaataatcaaaataagaacgagagtgaccaa
aaaacgaaatgtgtaggggatttttattccgcgcggaaagtttcaattataaaagaaaaa
aaaatgtcaaagaaaaataaaatatctagtgattcaagtgatgattctagcgatgtgtcg
tcgaataaaataagaagacaacgtataattaaacataatagatctaaaaaaataataaaa
tctaaaacaaatgtatattcttctgacagcgaaagtgatgagaacaatacagatacagcg
tcgaatgtatcaaagaggatttcaaaaggtacaagacaacagaataaaaaaatggataat
tctcataatacaagatcgagggataaggcaaaaaaaaataattcgactggtgaatctgaa
gatgaaaaatatataaaacgaaatacgaggaaacgttcagaaacgagtcagctgatgtcg
cacagtaatgatgaacgaaaacgtgacaagtcatcgaagcagcgactttctaatattcag
gaagataattcggataatagttctagtaaagaatttcagaaaataaaacttcaaaaggtg
aatcgcaatataaggcaattggcaaatttggaagtagatcatactaagacacctaagaat
tctacgaataacagtgacaaagatatcaatggacaatcaaataaaaaaaatcttttagat
atgaaaaaaattttaatggactgtaagaaggcatgttcagattttcagatgcatatcgaa
agtatagaacacttatatggtaaagaagatgaagagaaacttgtgttgaaatctacagaa
aaaattgatcgcttaaggatgatattggagaaaaaacataagaatttattaacttcttat
caggtgtggtctaggaatagaaaaaaatctgctacgaaaaggtcaaacaaagtagttaca
gatagtgaacaatcagaagaaaaacgtgataactgtatagaggatgaggataagcacgta
tttgatgataaacaggatggaaataaagatgtgtctgaatgtgatagtgaagaaatattt
tcagcagatgaaacaagatcaccgcagaagatgcaagcggctaggtgtaaagtggatcta
gccagaacggaaaagagcctaaataacaatgaaactgataccgatgatgaagatagaatg
tcaataaataaatcgaagataaataacgataaaaataatgtggacgtgcaagatgattcg
accacttctcccacattaagattaaaagagaagaatattagtatagaacgatcaagtgaa
aaacaactatcttcggaatacaataagaacaacaacgagacacaatcgtctgatgaaaat
gaaactgagattgaagattctccttcaaaaagtagcagcaagaaaatggtattagaaaat
gatgaaacaaatcgattgaaaaagaatataatcgacgagtcgatggatatgttcgacaca
tctcccgaagatgcagaaaagaacagaacggaagtcgaaacaaattgtgataaagaagag
cttttacagacgtctaaagataaacttttagatccttgcgaaaattccttacaaaataaa
atttcagaccaaaaagagagaacattccttgaagaagaggaagatttatcaaatcaaagt
aatcaggaaaaaatggcagctatatctgtaaccaataaggaagtttacgactcgaaagca
tccagaaaaatgaatatagatgataatgaatctctcgatgacgctgaagcattggcaaag
gaagctctgttggctgactctgacacatcggacacatccaataaaaatgtagctaagtta
actgaagtttccacagacgatgaaactactaatcgaatcgagaagaaaaacgaattagaa
gatattgattctgatgtcaatagtgttagtacaataaaactttcaactttaaaaaaaaat
gcgaataccgacgctgaaaaagatgttatcactgaagcggaaattaaagctgagaaaaaa
agcaatgatcaatcagatgaaagatctcgtaaagaaatgagctcttcggaggatgaaaat
atcaagaaagaaaaagctgccaaaaaagctctcttagaatcggacgattctataccttta
agggaatcgagagaatccgtcgattcctttaagaagtttgagtcggattcttctaagaaa
aatgccgaagcgaaacggttgcttttagcatcttccagtgaagactctagttctgaactg
actctgtctgaaatgataaatgtttcaaagaatattaaacgtaatcgtgagcctgagact
gatagagaacataatgtctccagactaaagaagagaagactcaaactcaatgaaaattac
tattacaaaaatgataagaaattgagaatgtcctgcaaagttcatttagagcgattaagc
acggaaattcttaaacgctactcacatgcattaaaaaagtcaagagagtatttggaacat
aaggaatttaaaagtcttgttaatctggataaactcgaaaagaatcacaagaaaaatata
aagaaagattctgattcgtcgatggacaacgattcgtcctcaaaaatttcgaaaaggtca
aataaaaaggaaaatacaaagatcaaagaagagtctttgatggatcatttgaaaaaaata
gagaacggcgataccgtggcaactgtagaaacagatctttatactgaagatcaatcaatt
tatcaaaaacaaaatgtagacgatactatctctaatgacgctctaatatcagaggcagat
agactcgcaaaagagaatctgttaaattcttctgattcagacgaggaagaagtaatactg
gacagtgattctagcataaagaatgatgatacaaatggaaaaaaagagaacaagaaaaag
caatatcagaagaaatctgaagagcaaacttcgaaaaatgataacgagaaagacaaaagc
gcttggaggagagacaagatattaacaatgaaattatctgattctgattctgatgctgaa
agagaaaagtgggagaacaaacaagaaaaacttgcaaataaatccaaaaataataacagt
gattctggtgaagaaaaatcttttaagtctaaaaggaaaaaaaagaagactgggcgaaga
atcattgattcagattcagacattaaaataacagatgtagattctgataattcttctaat
acttcaagcccttttatcacactatattcaaacgattcagatgacacgagaaaagaaaaa
gagcaattgaaacgaaataagagacgtaaacgcggcgattcgtcaggtacagattcttcg
ctttcagagaagaaatcaaaaccaaaacgaaagcgtattaaaaaaatggcatccgacagt
gatagtagcgatgtagaaatgttaaactcgcaagaatcttcacccggtaaaagtggtcga
aagaatatacgaaaagttttgaaggacaagcaagtaacggacgatacgaaacaagctgct
aaagaagaagaggagaggcttaaacgtatcgctgaacgtcaagctgtgtacaacgaaatg
tttgagataagacttgccggtgaagagaaagtagacaaactcgttttagacttcgataca
gaaacgaaacaggagcttgttactgtgcataaggaattggtaaaacatctgaagccgcat
caagcacaaggcatcaaatttatgtgggacgcttgtttcgagtctctagaaagggtgaag
tctacatccggatctggatgtataatcgcgcactgcatgggtttgggcaaaacgctacaa
gtgattactctgacgcatacgcttctcactcacgaagcgacaaacgttaagacagtactg
gtagtttgcccattaagcacagtactcaattggcgaaatgagtacaatacatggctgaag
gatttggatgattttgaagtgtatgaactgacaaaatttaagaagaattttgagaggaaa
tatcaactgcagagatggcaaaaaaccggcggtgtgatgattattggctatgaaatgttc
cgtaatcttacgagtccaaatagaaatattcggaaggctatgaaggaagttatgttggaa
tgcctagttgatccgggtgctgatcttgttgtttgtgatgaaggccatttattaaaaaat
gaagacactgcattaagtaaatgcatgagaaacgtgaaaacattgagacgcatagtactt
actggaacacctttacagaacaatttaatagagtatcattgtatggtgcagttcgcgaaa
cccaatctgctgggtacaaagaaagaattttcaaatagatttgtaaatccgataacaaat
ggtcagttccatgattctactgcttatgacgttaaattaatgaaaaaacgtgcgcacgtg
ttgcacaaaatgttagagggtagcgtgcaaagattcgattactccgtgcttacgccattt
ctaccaccgaaacaggaatatgttattttcgtcagattgacagacattcaagttaaattg
tatcaatattacttggagaatgttgccagacgcctatctggtcaaggaagaactctcttc
gctgattttcaggcattacaaagaatctggacgcatcccttagtcctacgtctaaatgca
gagaaaatagaaaaagcaaatgagaaaaaggaactttctgattcagaaggttcgttaaaa
gatttcattgatgatgataccgatgtagagagtagcagcagcagcagcaacagcaacgat
tcaaataatgacagtgatgttcaggcgatcgatgaaaaagacaatgcaaacgttcctaaa
cgtaatacaagaaataatcctgtcgaagaggaaccaatggaacagatcaaagagacctca
gagtcagaagtggccacagaatggtggttgcagtttgtacaatccgagcattttgaagat
atgagagagtcagctaagctattacttctgtttgcaattctaaaagaaagtgaacagatc
ggcgataaagtgctcgtattctctcaatctctatattctctcaccttaatcgaggagttt
ttaagaagaatagatgatcagactcagaaggatgaatcctgtgacactcttgataatcat
actggaagttggtctttaggactcgattacttccgattggatggtcagacttcgcctgaa
aatcgaaatttatggtgtaagatatttaatagacccaccaatataagagcgagattattc
ctcatatctacacgtgctggaggattaggaataaacttaactgcagcgaacagagtgatt
atatttgacgccagttggaatccatctcacgacgtacaaagcatatttcggatatacaga
ttcggacaaaaaaaaccgtgttacgtatatcgatttcttgctgcgggaacaatggaagaa
aagatttacaaccgtcaagttacgaagctgtcgctttcgtgccgtgtcgttgacgaacaa
cagatcgaacggcattacagcaatcacaatttaaacgagttgtatacgtttgagggatac
gataaagaaaaacctacattaaatttacctaaagatagactgctagcagagatattcttg
aagttcaaggatattgtggaaaattatcacgaacatgactctctactagaaaacaaggcg
gaagaggaattggacgaagaagaacgcaaacaggcttggttagaatatgaagaggaaaag
aaaggaaaaccactaataaattcaatggcaaatacagctttaatgatgaatcagaataat
gcgtttttgcaacaatgtatgatgatgaggaactccatgcagcctaacatgatgtctcaa
aatatgttcgaatataacagtttccagcagcttattcgtaaagatgtaagatatgaagat
tatccgaatgcaacaccagaacaacaaaaaatgatgacgaatcgagctatagtggaaatg
tataattattgggaaaaacaagctacactatacaataagcaacctgtacaaccagtacaa
aatccgtttttgccgaattttcaacaaagaccacaagcgccgaattttcagcaaagacca
caagttccggtaacgagcaatatgcatccgcaagtcacgcaattgggccacttgctttcg
ggacaatcgatgaattatgtaaacgcgaataaatccgtgcaattaaacgatacacaaacg
ggagatttaattccaaatttattttcaaaacagaatacctcgtcgaataacaatataggc
ggaaccatggaccaggatataatagaggtagttcctactacaagtactggaataacacgt
cagagcggaatgagtagcgtacaaatagctgcgcaaccaattgataacagtaagatccaa
gaggagtaa
DBGET
integrated database retrieval system
