KEGG   Trachymyrmex cornetzi: 108758774
Entry
108758774         CDS       T11212                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03420  Nucleotide excision repair
tcz03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108758774
   03460 Fanconi anemia pathway
    108758774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcz03032]
    108758774
   03400 DNA repair and recombination proteins [BR:tcz03400]
    108758774
DNA replication proteins [BR:tcz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108758774
DNA repair and recombination proteins [BR:tcz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108758774
SSDB
Motif
Pfam: ERCC4 UPF0669 SAM_KSR1 ResIII
Other DBs
NCBI-GeneID: 108758774
NCBI-ProteinID: XP_018359378
LinkDB
Position
Unknown
AA seq 1010 aa
MKTFLITALITYVSALNEELLHYVSDDVPSGSYKYYSLTYDGNIKIRLTSITGDADLYAS
QIISKPTYEPDHYCLQSATCGEDTIFIPKSFKRPVSIGVYGHPSHEISKYTLLVSEVIVE
DDTSSYDETSGNTYKTRDRIVMLEYENQIFLDIVQEDGLVITAKGLGIETVFANVIKAYL
DPGNLVLVLGTTDYDERYFIDLLKSYGTSRLPLVINAECSSNEREIMYLEGGVLFISGRI
LVVDLLKNRVPLHLVTGILVYRAHNILNAYQEAFALRLYRQNNKTGFIKAFTSSSLAFTV
GFSKVERVMKALFVKKLYLWPRFHATINNCLSKHEPDVIELHVHITPKMQSIQSTLLDVM
NYVVKELKRLNKYLDLDELTVENAVAKKFHKQLHLQIDPIWHQLSTTTKQLFSDLKTLRS
LIMSLTYEDSVSFYAMLNRLRTMEYAMKAGGWIMLDEFENLFKYARSRVYTEKNELKPEP
NPKWEALSEVLFEIQEQKHKKKDYENIDKVLILVHDNHICRQLKNYLTMGANEYLLYEAL
KKLSHNKEQKTSDDSGKKTKDQPSTSESNTDEETENTQDTYVLTLSQKCVEGTQSTSTED
IKHQTLFEECSQLAELDLTKEHYAASVPIVFIQAIKKGGDPMALQRMLTEHIPNNIILYA
NDIGIVRQLEIYQNNNLSLDLKVYFLIYGGSIEEQEYLTSLRREKEAFESLITTKITMVV
PEDQDGKSDDCLAFAIQSDDANQENTRKGGKQSEAKIIPKVIVDMREFRSELPAILYTRG
IKIEPVTLVVGDYILTPEICIERKSISDLIGSLLSGRLYNQAVSMTRHYAKPMLLIEFDQ
NKPFCFQGNYYVSKDLKSSDIMAKLQLLTLHFPKLKIVWSPSPHATAQLFEELKQGRDQP
DSNVAAKIGADEDTENKQILVEKYNPHIQDFIGKLPGVHSKNLRVLLNKGKSLDHLIKLS
QEELKEILGNKNDAELLYKALHEKCLIDEGPGTSKVSKVRGKRLFSRVKK
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgaagacatttcttattacagcactgataacttatgtatcggcactgaacgaggaatta
ttgcactacgttagcgatgatgtacccagtggctcttacaaatattacagcttgacttac
gatggtaatattaagatacggttgacatcgataacaggagatgcagatttgtatgcatca
cagattataagcaaaccgacgtacgagccggatcattattgtctgcaatccgcaacttgt
ggagaagatactattttcatacctaagagctttaaacggcctgtaagtattggtgtttat
ggccatccatcgcacgaaattagtaaatacactttgttggtgtctgaagtaatagttgaa
gacgatacttcatcttacgacgagacatcaggaaatacttacaaaactcgtgatagaata
gtcatgttggaatatgaaaaccaaatctttcttgacatcgttcaggaggatggattagtt
attactgctaagggtcttggtatagaaactgtttttgcaaatgtaataaaagcttatttg
gatccaggaaatctggtattagtcctgggaaccactgattacgatgagcgttactttatt
gatctgcttaaaagttatggaacaagtagattaccacttgtaatcaatgcagaatgttct
tctaacgaaagggaaataatgtatttggaaggtggagtgctgtttatatcaggtcgtatt
ttggtagtagatttgttaaaaaatagagttccactgcacttggtcactggcattctcgtc
tatagagctcacaatatactaaatgcttatcaagaagcatttgcattgcgtttatacaga
caaaataataagactggatttatcaaggcgttcacaagttcgtcactagcttttacagtt
ggattttcaaaagtagaacgggttatgaaagctttgttcgttaaaaaattatatttatgg
ccgcgttttcacgcaactattaataattgcttgtctaaacatgaacccgatgttatagaa
ttacatgtgcatatcacaccaaagatgcaaagcattcaaagtactttgcttgatgttatg
aattatgtcgtaaaagaattaaagaggctcaataaatatttagatttagacgaattgact
gtggaaaatgcagtagcaaagaaatttcataagcagttacatttgcaaatagatccgatt
tggcatcagcttagtacaacgaccaaacagttgttttctgacttaaaaacattacgttcc
cttattatgtctttaacgtacgaagattctgtttcattttatgccatgctaaatcgttta
cgaactatggaatatgctatgaaagccggtggttggataatgttggatgaattcgagaat
ctgtttaagtatgccagaagcagagtttatacagaaaaaaatgaactaaaaccagaacca
aacccaaaatgggaagctttatcagaggtcttgtttgagattcaagaacagaaacataag
aaaaaagattatgaaaatattgataaagttcttatcttggtacacgataatcatatatgt
cgccaattaaagaattacttaactatgggtgcaaatgaatacttactttatgaagctctg
aaaaaattatcacataataaagaacaaaagacaagtgacgatagtggaaagaaaacgaaa
gatcagccatcaacatctgaaagtaacacagatgaagaaacggaaaacactcaagatact
tatgtgctcactttgtcacaaaaatgcgtagaaggaactcaatctacttctacagaagat
ataaaacatcagacattgtttgaagaatgttcgcaacttgcagaattggatttaactaaa
gaacattatgcagcatctgtacctatcgttttcatacaagccataaaaaaaggaggagat
ccaatggccttacaacgaatgttaaccgagcatatcccaaacaatattattttgtatgca
aacgatatcggtattgtgaggcaattagagatatatcaaaataataatctgtcattagat
ttgaaagtgtattttttaatttatggtgggtcgattgaggaacaagaatatcttacttct
ttacgacgagaaaaggaagcatttgagtctttgattactacgaaaattaccatggttgta
ccagaagatcaagatggaaaatcagacgattgtttggcttttgcaattcaatcagatgat
gcgaatcaagaaaatacgcgtaaaggagggaagcaatctgaagccaaaataattccaaaa
gttattgtcgatatgagagaatttagaagtgaattgccagctattctctatacacgcggt
ataaaaatcgaaccagtgacattagtggtcggtgattatattttaacaccagaaatatgt
attgagagaaaaagtatatctgatttaattggttctttactttccgggagattgtataat
caagcagtttctatgacaaggcattatgctaaacccatgcttctcatagaatttgatcaa
aataaaccattctgttttcagggaaattattatgttagtaaagatcttaaaagtagtgac
ataatggcaaaactgcaattattaactcttcattttcctaaactaaaaattgtatggtct
cctagtccacatgctacagcacaattgtttgaagaattaaagcaaggacgagatcagccc
gattcaaatgtagctgctaaaatcggagcagatgaagatacagaaaacaagcaaatatta
gtagaaaaatataatcctcacatccaagattttataggtaaattaccgggtgtacattcg
aaaaatttgcgtgttctattaaataaagggaaatcattagatcatcttatcaagctatca
caagaagaactaaaagaaatacttggaaataaaaatgatgctgaattattatataaagct
ctacacgagaaatgtttaatagatgaaggtccgggaactagcaaagtttctaaagtacgt
ggtaagagacttttctctagagtaaaaaaataa

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