Trachymyrmex cornetzi: 108759785
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Entry
108759785 CDS
T11212
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04080
Neuroactive ligand-receptor interaction
tcz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108759785
04082 Neuroactive ligand signaling
108759785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcz04040
]
108759785
Ion channels [BR:
tcz04040
]
Ligand-gated channels
GABA-A
108759785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108759785
NCBI-ProteinID:
XP_018360907
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MTAMGSFHVVSGSFVLLVATVVLLPATHHTPFAYAATAGGSMLGDVNISAILDSFSVSYD
KRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKPRPGVETLS
VGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQY
FPMDRQLCHIEIESFGYTMRDIRYKWNSGLQSVGISNEVELPQFRVLGHRQRQTTIHLST
VGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVR
SMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKIS
YVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFQKIAESMKAASENPGPPRVP
GDHGDHAPKQTEVRFKVHDPKAHSKGGTLENTINGRADEESAGAPQHIIHPSKDITKLYG
ITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLEEAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatggggtccttccacgtcgtctccgggagcttcgttctcctcgtggccacg
gtcgtcctactgcccgccacgcatcacacaccgtttgcatacgccgcaactgccggcggc
agtatgctgggcgacgtgaacatctctgcgatactggattccttctccgtcagttacgat
aaaagagtaaggccgaactacggaggtccgcccgtggaagtcggcgtcaccatgtatgtc
ctcagcatcagctccgtgtccgaggtgttgatggacttcacgttggatttttacttccga
caattctggacggacccacgactcgcgttcaagccgcgaccgggcgtcgagacgctcagc
gtcggttcagaattcatcaagaacatttgggtacccgacaccttcttcgtcaacgagaag
cagtcgtactttcacatcgctaccaccagcaacgagttcattcgcattcaccactcggga
agcatcacgcgtagcatacgcttaacgattacagcgtcgtgtcccatgaacttgcaatat
ttcccgatggaccggcaactgtgtcatatcgagatcgagagctttggatacacaatgcgc
gatattcggtacaaatggaactccggcctacagtcggtcggcatctcgaacgaggtggaa
ctaccgcagtttcgcgtgctcggtcacaggcaacgacagacaaccatacacctatctaca
gtcggatacacgatgagggacatccggtacaagtggaacgagggcccgaacagcgtcggg
gtcagcaacgaggtctccctgcctcagttcaaggtcctcggtcatcgtcaacgtgccatg
gagattagtcttaccaccgggaattactcgcggctggcctgcgagatccagttcgtacgg
tcgatgggctactacctgatccagatctacataccctcagggctgattgtcataatatcg
tgggtgagcttttggctaaaccgaaacgcgacccccgctcgggtggccctcggagtaacc
actgtgctcactatgacgaccctaatgtcctcgacgaacgcggcgctaccaaagatctcc
tacgtcaagtccatcgacgtctatctgggcacctgcttcgtcatggtctttgcctcgttg
ctcgagtacgccacggtgggctacatggcgaagaggattcagatgcggaagaatcggttc
caaaagatagccgagagcatgaaggcggcgagcgaaaatccaggaccgccgcgcgtgccc
ggcgatcatggcgatcatgcgcctaagcaaactgaggtgcggttcaaggtgcacgaccca
aaggcacacagcaaaggtgggacgctcgagaacaccataaatggtcgcgccgatgaagaa
tcggcgggcgcgccgcaacatattattcatcctagcaaggacatcaccaagctctacggc
ataacgccgtcggacatcgacaaatactctcgcatcgtattcccagtatgtttcgtttgc
ttcaatctgatgtactggatcatttacctccacatcagcgacgtggtcgcggatgacctc
gtgttgctcgaggaggcaaagtaa
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