Trachymyrmex cornetzi: 108759802
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Entry
108759802 CDS
T11212
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
tcz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108759802
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108759802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108759802
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108759802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DUF7129
Temptin_C
Motif
Other DBs
NCBI-GeneID:
108759802
NCBI-ProteinID:
XP_018360934
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MPREGGNPAGRRPSSRNAKPYDANNSFVRKMATKVTDFIPQSSWISKWFNTSQSNEDALE
NTRNIEETELEDDVQQPPSKRSRIRMDVIHPPGTFSIQTRVKTALNTVESSKEQYPIHNE
MAEDFATAGPSGIGRLMSSTPAVQADIRTVTSHRSDLNSLTSTNNGIANGMDDNSESSES
TSGCSSLIPQINRHEGPSNLLYSSTFTSRKRHLDDKLTFTNHLQSPRSLFLDSNSRDSLS
SRRPSFNASIITNAADRASLLSSPFYSGNITFGGANAAGLYKRSRNIFNNSNEIQLKVPR
RTNVEVKPSDAVGVDSSGMSQTAKKILEALEHFSSPVSDAKKIPLKNSSNAVSSVNRKRT
REEIPNPSARIGLRHLTRELTVPTVPDILKLRRRQKLQDTTLMARKIVSARSDPPPSPQE
YRLRTEDTDSEKYRGKLKGKSKINLEQEETVAPVNLPNIPLPITTLPNFNFTLPPPASHS
AGKTIANKENSFTFASPIKVTDAGKSLQSVNNFTFSNPLNAEDCANNSTDSRSLTEKEFT
VDCAVTSVPNFIWSGSSTAPRLKAKAKNVSMLPQELKSGSVMDVFSKSSKIESNLIGQTN
SGLASEMTHTDKTISSDSDITSTHDKESSWECSECMIRNNGTDKQCTACKMPRFNSNDKT
LLPSTSTTDTVVETKPIEPDCFGSQFKLSTNQWECTTCCVRNKQSDITCVACTTPKPGSS
SAMQQTVKSQNFDLMDKFKPAEGSWECSGCLLRNAANVITCPCCNTSKPTSVKTKPKTTD
NVTESSAQKLNTSTEVTATKEILNSEIMNKFKPSKDSWECSGCLVRNNSSVTTCPCCSTP
KPNSIGESSKVEQTSSNGFGDKFKKPEGAWTCDSCLLQNDAKHTECVACQASKPGTVKLN
ESSSSGSTLQFKFGVSSGTTNLTNQPSGFKFGIDKSDNQSKSDTTSPLNGFKFGSGQQNS
GMAQFTFGIPKEENKAVSEAAKTTNSVTSSSSTGFVLNVKSYEKSESTNQNQESKQETLF
GMPKSDSSTTASEKQNTSIVSSAPSTAPSFSFMGGFLNEKPGFAFPNKNQRVQSSPKKTS
FATTVTESSKPAATTDAVPTSTNTTLPSLLTQKNITKNILDAKSEPTFSFGVSSSVSAVT
TTSMNATTTCLPTFAQPTFTFSDTKTTSQLTTVPSFSQIPTSSATLSTSVSFGEKTTETT
PTNKAINNTPVAPLFPIVSSSTPLFTNESKTTIAFGTDKPSSFTTTGSKPSGFVIPENKG
NVPTFSSNTESKSPIFAASETKLPVFNSPTANPLSTFGTPSNSATSTPFGPTNTPTFGNN
TTSAFGSATTTSAIFSTTKPVETNPASNNSSLFTFGSASSQQSASGGFNFSANVNPAASP
AKPLFTFGSNSSTPQNSNNTFGSDTFGANSAPTNTNFAFNPSTKQEVPAAFGQGAAATPI
FGAPQTNPQTPATSSFSSTPSSSAAFNFGSTAPAAATPGGFNFGGMSSTSASPGGFNFNS
PASTPAVAFDPNSRPSFNFTKGSAPTAFNAPPQSAAAPRKIKKAFRRCVR
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaggcggcaatccggccggcaggcggccgtcgtcgcgcaatgcgaagccc
tacgacgcgaacaactcatttgtaagaaaaatggcaaccaaggtgacagattttatacca
cagtcctcatggattagtaagtggttcaatacctctcaaagtaatgaggatgcgttagaa
aatacaaggaatattgaagagacagagcttgaggatgatgtgcagcaacctcctagcaaa
cgatcgcgtattcgtatggatgtgattcatccacctggtacattttctatacaaacgaga
gttaaaactgctttgaatacagttgaatcctctaaagagcagtatcccattcataatgaa
atggcggaagattttgcaacagctggaccaagtggaataggtcgtttaatgtcctctact
cctgcggtgcaagcagacattaggactgtaacgtctcataggtctgacttaaattcatta
acttcgactaataatggaatagcaaatggaatggatgataattcggaatccagtgaaagt
actagtggatgcagttcgcttattccacaaataaataggcatgaaggcccatcaaacttg
ttgtacagttcaacatttactagtaggaagaggcatcttgatgataaattgacatttact
aatcatttacaatctccaaggtccttgtttctagacagtaattctcgcgattctttaagc
agtcgtagaccgagttttaacgcatcaattataacaaatgctgcagatcgtgcatctctg
ctatcttctcctttttatagtggtaatattacttttgggggtgcaaatgcagcaggtctt
tataaacgaagtcgtaatatttttaacaattcaaacgagatacaacttaaagtaccaagg
agaacaaatgttgaagttaaaccttctgatgcagtaggagttgattcatcggggatgagt
caaaccgccaaaaagatattggaagcattagaacatttttcttcacctgtatccgacgcg
aaaaaaatcccgttaaaaaactcaagtaatgctgtgtcttcagtgaacaggaaaagaaca
cgagaagagataccaaatccatctgctagaattggtctgcgtcatttgacgcgtgaatta
acagtaccaaccgtccccgatatattgaaattacgacgaagacaaaagttacaagataca
actcttatggctagaaagatcgtttccgctcgtagcgatccacctccgtctccgcaagaa
tatcggctgaggacggaggataccgatagtgaaaagtaccgcggcaagttaaagggcaaa
tctaaaataaatttagagcaagaagaaacggtggcgcctgtaaatttgccaaacatacct
ctgccaataacaacgttacctaatttcaatttcactctaccaccccctgcttcacattcc
gcaggcaaaactatagcaaataaggaaaactcttttacatttgctagccctattaaagta
acagatgctgggaaaagtttgcagtctgtcaacaatttcacttttagtaatccactcaac
gctgaagactgcgcgaataattcgactgattcacgttcattaacagagaaggaatttact
gttgattgtgcggtaacatccgtaccaaatttcatttggagtggctcatccacagcaccc
agattaaaagcaaaagcaaaaaacgtgtctatgctgccgcaggaattgaaatcgggaagt
gttatggatgtattttccaaatctagtaaaatagaatctaatttaattggacagacaaac
tcgggattggcttctgaaatgacacacactgacaaaactatcagttcagattctgatatt
acaagtacgcacgataaagagtcatcttgggagtgtagtgaatgtatgattagaaacaat
ggtacagataaacaatgtactgcatgtaaaatgcctcggttcaattctaatgataaaact
ttgttgccctcaacgtcgacaacagatacagttgtggaaacaaagccaattgagcccgat
tgtttcggatctcagtttaaactatctacgaatcaatgggagtgtacgacttgctgcgta
agaaacaagcagagtgatatcacgtgtgtagcatgcactacaccaaaaccaggaagtagt
tctgcgatgcaacaaactgttaaatctcaaaattttgatctaatggataagtttaaacca
gccgaaggatcatgggagtgctccggttgtttactaagaaacgccgcgaacgttattaca
tgtccttgttgcaatacgtctaaacctacttctgtaaaaacaaaaccgaaaacaacggat
aatgtcaccgagtcatctgcgcaaaagttaaacactagtacagaagtcacggcaacgaaa
gaaatattaaattccgaaataatgaacaaatttaaaccaagcaaagattcctgggagtgt
tcaggatgtcttgttagaaataacagttctgttaccacctgtccttgctgcagcacacct
aaacctaattccattggagaatcgagcaaagtggaacagacttcaagtaatgggtttgga
gacaaatttaagaaaccagaaggtgcgtggacttgcgattcatgcttgctacaaaatgac
gcaaaacatacggaatgtgtagcttgtcaagcttcgaaacctggtactgtaaaattaaac
gaatcttcatcgagtggttctaccttgcagtttaagtttggtgtatcgtctggtacaaca
aacttaactaatcaaccaagtggatttaagtttggtatagataaatctgacaatcaatct
aaatctgacacaacatctcccttgaacggatttaaatttggtagtggacaacagaatagt
ggtatggcacagtttacatttggcattccgaaggaagagaataaagctgtaagtgaagca
gctaaaactactaatagtgtcacgtcttctagtagtacaggatttgtactcaatgtgaag
agttacgaaaaatccgaatctactaatcaaaatcaagaatctaaacaggaaacgcttttc
ggtatgccaaaaagcgatagttcaacaacagcaagtgagaaacagaatacaagcattgtg
tcgagcgctccatcgactgctccttctttctcctttatgggaggatttttaaatgagaaa
ccaggattcgcctttccaaacaagaatcagcgtgttcaaagttccccaaaaaagacttcc
tttgcaaccactgtgacagaaagctccaagccagcagcaacaactgatgcagtaccaact
agcactaatacgacgttaccgtcgttactgacgcaaaaaaatattacaaagaatatatta
gacgcaaaatcggagccgacattctcattcggggtatcaagcagtgtaagcgctgttact
acaacttccatgaatgcaacgactacttgtcttccaacttttgctcaacctactttcaca
ttttccgatacaaagacgacatctcagttaactacagtaccgtcttttagccaaattccg
acgtcatctgccacgttatccacgagcgtgtcgttcggagagaaaacaaccgagactact
ccaactaataaagccataaacaatacaccggtcgctccgctctttccgatcgtctcaagt
tccacaccgctgtttaccaacgagtcgaagacaacgatagcattcggcacggacaaaccg
tcatcattcaccacgacgggcagcaaaccgtcaggattcgtcattcccgagaacaaagga
aatgttccaacgttcagcagtaacaccgagagtaaatcaccaatttttgctgcatcggaa
acgaagttacccgtgttcaattcacctacggcaaaccctctatcaacgttcggcacaccg
tccaacagtgctacttcaacaccttttggaccaactaataccccgacctttggaaataat
acaacatctgcttttggcagtgctacgacaacatctgctatattttcaaccaccaagccc
gtcgaaactaatcctgcgtcgaacaattcttctttattcacattcggctcggcttcatcg
caacagtcggcaagcggcggatttaacttctctgcaaatgttaatccggctgcgtcacct
gcgaagccgctctttacatttggtagtaattcaagtacgccacaaaatagtaacaacact
ttcggtagcgatacatttggagctaactccgctccaacaaacaccaattttgcgtttaat
ccatctactaaacaagaagtaccggcggcatttggtcaaggcgcagcggctactccgata
ttcggtgctccacaaacaaacccacaaactccagcaacatcatcgttctcatctactcct
tcgtccagtgcagcattcaattttggatctacagctccagctgctgcgacaccaggaggt
tttaactttggaggaatgtcatctacatctgcatcacccggaggattcaattttaattct
cctgcttctactcctgcagtggctttcgatcccaatagtcggccttcgttcaacttcacc
aaaggaagtgcgccaacggcatttaacgctccaccccaatcggcagcagctccacggaaa
atcaaaaaagcatttcgaagatgcgtgcggtag
DBGET
integrated database retrieval system
