Trachymyrmex cornetzi: 108759912
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Entry
108759912 CDS
T11212
Name
(RefSeq) LOW QUALITY PROTEIN: helicase domino
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108759912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108759912
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
108759912
SWR1 complex
108759912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108759912
NCBI-ProteinID:
XP_018361111
LinkDB
All DBs
Position
Unknown
AA seq
2863 aa
AA seq
DB search
MSDKQGAPILPPLSRGVANNGGNNGSSTQQTVSLQQVLATAQGLNVLATTSGQQFVITTQ
VPGLTQVIPNNATTNASGTQQVTRIVNIAGTPPRNAVGIVGTSPPTVSRPQNSTKLMLTT
SPKLVRTSLSNVFVAPTSSQASSPQVQVQSPSPARKRLKLSETTEKPIPFDVSDCRRRIM
EHKMRRMRNVREKYVENASELFFLHTGGNMMEYYAWRKRSPTPQLVHFLRQHRLDPDDDD
EDLTAPLSSIPEFSQLSAVTTTVTTTTTVTSAIVTATTTVTTVTSGSTVVQIPNQRAEVK
IAGAGVTPVAVSTTLPAAALAQLSQGGTSVVTDSSKLTTTAASSVVEKSSPSIITVATPK
SSVTTAALNSPQPIVKLVKLSTPTTITTSCDISNNQEQIVEKAKQEAYVMQRIAELQREG
LWSERRLPKVQEPTRTKAHWDYLLEEMVWLAADFAQERKWKKAAAKKCARMVQKYFQEKA
IQAQKAEKLQELRLKKIASLVAKEIKTFWANVEKLVEYKQQTRLEEKRKKALDQHLNFIV
GQTEKYSTWLTEGLNKTDGPQSIPASINSSRISSPVPVEKCHSDEEFQPNQSSDDDEETI
AKAEEEMKTTNHKEEVELLKKESEIPLEDLLKDLPPDYLEHRNRSLSPNNTTNEEEQNEN
EEAIDADADFVAASGESTDEEDTIMEEERLEGEIDHKRELDELKADNEMSIDELAAKYAN
MSDVLMNEDDEAEGTDKESSERGAQEIEDQISSNESESEESDHDSDEDESRTQSDPEADI
GLQSLLEDLSAEKQSENKVTEDDNSDAHNEMDNVAALAESIQPKGNTLLTTSVVTKIPFL
LKHSLREYQHIGLDWLVTMYERKLNGILADEMGLGKTIQTIALLAHLACEKGNWGPHLII
VPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQDHQ
SFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFQTQRRLLLTGTPLQNNLMELWSLMHFLM
PNVFQSHREFKEWFSNPVTGMIEGNSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKY
EHVVMCRLSKRQRFLYDDFMSRAKTKETLASGNLLSVINVLMQLRKVCNHPNLFEVRPTV
SPFQMEAIEFVTASLVWSVLDYDPFKHIELSSLNLLLLNLELMLSAFVAHRVKRLRTPRK
LIEEINSQPEPPPRCPSGRIKINVRLSNQAKPQQQQQTQTRLKNLAGVLPTPRVGTSPLI
KSLNTSHSGPGQGVTLRVAGGQQLQGYSLQLVPHQAGVKAFPMATLGNNPQSTSVTTTTT
ATNAQRITVGNASIRDGIQRLATQTVTVKQGDSVQRIAVPSFAQLVQTSTGRHFILTPSQ
QNTNTVSFPVMTSSGSRFTVLSKSIMGLATSGATTVNKVVSGVVTTPSGRPIMRVPPLNV
TASQSSPSGNNSQQTANQQQPQSIRGIVTRQAQKEIAKVQNKEQPKSEFYLSQLEEERRQ
RRQNKLHLLADINERRCAACPLYGEDLFMALRIGKPATACRWHDGWVHCSKTREKIRTRK
EFFSHTEALAEAIKSTEQIVEELKEVFERYVVYVPAVRAPVPRFHVSHPPPHKLWNERRL
WTELQQQMSPKLSLFHPISCHMLTQFPDPRLIQYDCGKLQSLDRLLRKLKSESHRVLIFT
QMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQVLMERFNGDKRIFCFILSTRSGGVGVN
LTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLL
GDLAIEGGNFTTAYFKSSTIQDLFNIDQTENDASARMAEVLEQNRDREKAYSKDMTVGPF
QSGFSGQHTEEKAAMGALESALAAAEEDLDVLAAKTAKAEAVADLAEFDENIPLEEADKD
DTQVSKAEQEVQNLIAQLTPIERYAMKFVEESEGAFSAAQLAAAERELEEQKKEWELDRL
RALREEEERRMRLADDDEKPLTFGREDAQNQIWLSEHTMEQMPMWCPPTPPTTDNDVYID
YSLGFLYENIPMTEAQLPPIYVKKDRNRSRIDIGITDDGCRPTKMMRHKEESVLAPRSLF
DRPSPALMKMRRDMKLYKYRAIVRPPMPVLKTSSHVTKTSPEPDQAMDWLVYEEWGLLHS
IQNYQNLPLNTMILSPGHTPNWDMVADSINNGARLYRSPKHCRNRYESVIIPREEGKLLY
DTAPKKQKKQKTSVYKTLPVSEQQSKSNRIMRTSQLHNQDRNGSFTSTGNQRYEIMKSVS
NKRTPTVKPTSIVNSMMRNNPNVDVLATDYKILVDNPSTPIDIATRRADRIKLEKLNKAS
QVLTPEQQQQVAARLLQHQQQQQAAQQQQQLKLQQTQQQAGQQAIGNSVASQIHQLTQAT
VPSTKVATNVSLSNVTTTTAKARPGGGQMQDVRTTSANANIQQAAQRTATSLVSAGQTSA
GAVSGQKGGLVGVTMATAASGNKIPTPAQVQYYRQQQQQQQVLLRQQQLKVLQAQAASGQ
KVSVAVSATAAAAAAAQQRATLMKQGIGSVGTAGAATPQTAVGKPTMTRTLSETEIAAAL
LKRQALQQQAKAAAAAAAAQGQVPTPTGLTPAQIFAQAGLQVQQAGTSAGGTPVATLVKT
TNVPGVRTATPQQIRQLAIHPQIITQRKLPAQKVAQLAQVANKAGVQTQLIVQPTKSLPT
TMTVQQIHQVMKHVQPSTMQQFSHVSTGQTVSQASQVVLAKSPLQTRVIPVAPASLKQTI
QVVTASNPQLRQSTPIQGKPVTSAVRRSPGPGTSPSTSTSPGAAVSGSTVAAGTSPSVGA
TSVSASNLTSPSVLGQVRLQTLTQQVQQQTQQQQQTQQDTQPK
NT seq
8592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaacagggtgcacctattttaccaccccttagtcggggtgtggctaataat
ggcggaaataatggaagttcaactcaacagactgtcagtctgcagcaagttctcgctacc
gctcaaggcctcaatgtgctcgctactaccagtgggcaacagtttgttattacgactcag
gttcctggtctcacacaggtcataccgaataatgccacaactaacgcaagcggaacacaa
caagttacaaggatcgttaacatcgcgggtacgccaccgcgcaacgctgtcggaattgtc
ggcacgtcgcctccgacagtgtcacggccacagaactctactaagcttatgctgacaacg
tcgccgaaacttgtacgcacttccttaagcaatgtgtttgtggcaccgacgtcatcgcag
gcatcatcgccgcaggtacaggtgcaatcgccttcaccagcgaggaaacggctgaaattg
tcggaaacgacggagaaaccgattccatttgacgtcagcgactgtcgtagacgaataatg
gagcataaaatgcggcgaatgcgtaacgtgcgtgagaagtatgtggaaaatgcatcggaa
ctgttctttctgcacaccggcggcaacatgatggagtattatgcctggcggaagcgatct
ccgacgccgcagttagtacacttcctgcgtcagcatcgactcgacccggatgacgatgac
gaggatctgactgcgccactgtcatcgataccagaattttcgcagctatctgctgttaca
actactgtcaccactactacgaccgtcactagcgctattgtcaccgctaccaccactgtc
acaaccgtcacgtccggctccacagtggtccagattccgaatcaaagagcggaggttaaa
atcgctggggcgggcgtcacgccagtagcggtgtccaccaccctgcctgctgcggctcta
gcccaactcagtcaaggtggaacgtcggtggttacagactcgtcgaaactgacgaccacg
gccgcgagttcggtggtagaaaaatcgtcgccgtctataatcactgtcgccaccccgaaa
tcgtctgtgactacagctgcgctcaatagtccacaacctatcgttaagctcgttaagttg
tctacacccactaccataactacttcctgtgatatctcgaacaatcaggagcaaattgtg
gaaaaagctaagcaggaggcgtatgtaatgcaaaggattgcggaactgcaacgcgaggga
ttatggtcggaacggcgattgcccaaggtgcaggaaccgactcgaaccaaagcccattgg
gattacttgctagaggaaatggtctggttggccgctgacttcgctcaagaacgtaaatgg
aagaaggcagcagcgaagaaatgcgcgaggatggtgcagaagtactttcaggaaaaggcg
attcaagcacagaaggctgagaaattgcaagaacttcggttgaagaaaattgccagcttg
gtcgcaaaggagattaaaactttctgggcaaatgttgagaaattggtggagtataagcag
caaacaagacttgaagaaaaacgaaagaaggcattggatcaacatctaaactttattgtg
ggtcaaacagagaaatattccacatggctgacagaaggtctgaacaagaccgacggtcca
caaagtattccagcttccataaatagttcacgtatctcttcgccagttccagtggaaaaa
tgtcattccgatgaggaattccagccaaatcagagttcagacgatgacgaagagaccata
gctaaagccgaagaggaaatgaaaacgaccaatcacaaagaggaagttgaattgttaaaa
aaagaatcggaaatacctttggaagatcttttgaaggacttaccaccagattatttggag
catcgaaacagaagtctatcaccgaataacacaacgaatgaagaggagcaaaatgaaaat
gaagaagcaattgacgcagatgcagatttcgtcgcagcgtctggtgaatccacggatgaa
gaagatacgataatggaagaggaaaggctcgagggagaaatcgatcataagcgagaactc
gatgaacttaaggctgataatgaaatgtctatcgacgaactcgcggccaaatatgctaat
atgtcggatgtgttgatgaacgaggatgatgaggctgaaggtacggataaagaaagtagt
gaacggggagcacaggagatcgaagaccaaataagtagcaacgaaagtgaaagcgaagag
agtgatcacgatagtgatgaagatgagtctcggactcagagtgatcccgaggcggatata
ggacttcaatcgcttctcgaagacctctccgcggaaaaacaatcggagaataaagtcaca
gaagatgataattcggacgctcataatgaaatggacaacgttgccgcgttggccgaaagc
atccagcctaagggaaatacgttactcaccactagtgttgtcactaaaataccttttctt
ctgaaacactctcttcgcgagtatcagcacataggattggattggcttgtcacgatgtat
gaaagaaagctaaacggcattctggctgatgaaatgggtctaggtaaaactatacaaact
atcgcgttgttggcgcatctggcctgcgagaagggaaactgggggccacatcttataatt
gtgccgacttctgtgatgctcaattgggaaatggaatgtaaaaaatggtgtccaggattc
aaaatattgacatattacggcacacagaaggaaaggaaacaaaaaagaacaggctggaca
aaaccaaatgccttccatatatgcattacgtcctataaattagtaatacaagatcaccaa
agctttagacgaaaaaaatggaaataccttatcttggatgaggcacagaatatcaagaat
ttcaagtcgcagaggtggcagttacttttaaactttcagacacaacggagattacttctt
actggcacaccccttcaaaacaatttaatggaactatggtcgcttatgcactttcttatg
cctaatgtttttcagtcgcatcgtgaatttaaagagtggtttagcaatcctgtaacaggc
atgatcgaaggaaacagcgaatataacgagaacataatccgccgtctacataaggtgttg
cggccttttcttttaagacgattaaaaactgaagtggaaaagcaattgccgaagaaatat
gagcatgtggtcatgtgccgtttgtcaaagcgtcagagatttctgtatgatgacttcatg
tcgagggccaaaacgaaggaaacactcgccagtgggaatctgttgagtgtgattaatgta
ttaatgcaactacgaaaggtgtgtaatcatccaaacctgttcgaggttcgaccgaccgtt
tcgccatttcaaatggaagcgattgagttcgtaaccgcttcgttagtctggagtgtgctt
gattatgatccctttaagcacatcgaattgtctagtttgaaccttttgctgttgaacttg
gagttgatgctcagtgcatttgttgcacatagagtaaaacgtctgcggacgcctagaaag
ttaatagaggagataaatagtcaaccggaaccgccgccgagatgtccatctggccgaatc
aagatcaacgttagattatcgaatcaagcgaagccgcagcagcaacagcaaacgcagact
aggctaaagaatctggctggcgtattacccacgccaagagtgggtacgtcccccttgata
aagtcattaaataccagccacagtggtccgggacaaggtgttacattgagagttgctggt
ggtcaacaattgcaaggttattctttacaactggtgccgcatcaggctggcgtgaaagct
tttcctatggcaacgttggggaacaatccacaaagtactagcgtaacaactaccacgaca
gccacaaacgcgcaaagaattacggtgggaaacgctagcattagagatggcattcaacga
ctggcgacacaaactgtcacggtcaaacaaggcgattccgtccagagaatagcggtacct
agtttcgcgcaactggttcaaacctctaccggcagacactttattctgacgccgagtcaa
cagaatactaacacagtttcgtttccagtcatgacatcgagcggatcgcgttttacggtg
ctgtctaagtcgataatgggtttggccacatcgggtgctacgacggtgaacaaggttgtc
agcggagtagtaacaacgccaagtggtcgacctatcatgagggtacctcctctgaacgta
acagcatcgcaatcgtcaccaagcggaaataacagccaacagacagctaaccagcaacaa
ccgcaatcgatacgtggtattgttaccagacaagctcagaaagagatcgcgaaagtgcag
aacaaagaacagcctaaatccgaattttatttgtctcaattggaggaggaaaggagacag
agaagacaaaacaaattgcatctcctcgcagacatcaatgaacgaagatgcgcggcgtgt
ccactttacggtgaagatctgtttatggctttgagaatcggcaaacctgcgacagcctgt
cgctggcatgatggttgggtgcattgttcaaagactcgagaaaagattcgtactcggaaa
gagttcttttcacacacggaagcacttgcagaagctattaaaagcacagagcagattgtt
gaagagctcaaagaggtctttgaaagatatgtagtctacgtaccggctgtacgcgctcca
gtccctcggttccatgtgtctcatccgccgccgcacaagttatggaatgagcgtcgtctg
tggactgaattacagcaacaaatgtcgccgaaattatctctcttccatccaatttcgtgc
cacatgctcacacagttccccgatcccagattgatccagtatgattgcggcaagctgcag
tcgctagatcgtctgttgagaaagctgaagtcggaaagtcatcgagtcctcatattcacg
cagatgaccagaatgctggacgtattagaagcctttttgaatttccatgggcacatatat
ctgcgactagatggtacaactagagtggatcaacgtcaggttttgatggaaagattcaac
ggtgataagcgaatattttgttttatcctgtcgacgagatctggtggtgtcggtgtgaat
ttgacgggagcggacacagtgatattttatgatagtgattggaatcctacaatggatgcc
caggcacaagacagatgccacagaataggacaaacgcgggacgtacatatctacagatta
gtcagcgagaaaactgttgaagaaaacattttgaagaaggcaaatcagaaaagattgcta
ggagatctcgctattgaaggcggcaatttcaccacggcatacttcaaaagttctactatt
caagacctgtttaacatcgatcaaactgagaacgatgcgtcagcacgaatggctgaagtg
ctcgagcagaatcgggatcgagagaaggcctacagcaaggacatgacagtaggaccattt
cagagtggtttttcaggacagcatacggaggaaaaggcagcgatgggtgctcttgagagc
gctctcgctgctgctgaagaagatcttgatgttctggctgcaaagactgcgaaagcagaa
gctgttgccgatcttgctgaattcgatgaaaacattccgctggaagaagctgataaagac
gacacgcaagttagcaaggcagaacaggaagttcagaatctgattgctcagctgactcca
attgaacgatatgcgatgaagttcgtcgaggaatccgaaggtgcgttttccgcggcgcaa
ctggccgcagccgaacgggaactcgaggagcagaagaaggagtgggagttggaccggttg
cgggcattgcgcgaggaggaggaacggcgtatgcggcttgccgacgacgatgagaagcca
ctgacatttggccgtgaggatgcgcagaatcagatttggttatcggaacacacgatggag
caaatgccaatgtggtgtccgccaacacctcctacaacggataatgatgtatatatcgat
tattctcttggatttttgtatgaaaatatccccatgacagaggctcaactgccgccaatt
tacgtgaagaaggatcggaacagaagcagaatcgatattggtatcactgatgatggttgt
cgaccgacgaaaatgatgcgccataaggaggagtccgtattagctccaaggtcgctcttt
gatcggccgtcaccggcattgatgaagatgcgtcgcgacatgaagctgtataaatatcgt
gcgattgtacgtccccctatgccggtcttgaagacctcgtcacacgtgacgaaaacttca
ccggaaccggatcaagctatggactggctagtctacgaggaatggggcttgttacattcc
atccaaaactatcagaacttaccactaaacacgatgattctctcgcccggtcatacgcct
aattgggatatggttgccgattccatcaacaatggcgcacgtttatacagatcacccaag
cattgcagaaacagatacgaatctgtgataatacccagggaggagggtaaactactgtac
gacaccgcgccgaagaaacagaaaaagcagaagacgagtgtttacaaaacgctgccagtc
tctgagcaacaaagcaagagcaacagaataatgagaacatcgcaattacacaatcaggac
agaaatggctcctttacgtcgacaggcaatcagagatatgaaatcatgaagtcagtttct
aacaagcgaacgcctaccgtaaaaccaacatccatcgtgaattcaatgatgaggaataat
ccgaacgtcgatgtcctggctaccgactacaaaatactggtcgataatccatcaacaccg
attgacattgctacgcgacgtgctgataggatcaaactagagaagctaaataaagcatca
caggttttaactccggaacaacaacaacaggtagcagcacgactcttgcaacatcagcag
caacaacaagccgctcaacagcaacaacagttgaagctacaacagactcaacaacaagct
ggacaacaagcaatcggaaattctgttgcatctcaaattcatcaattgacacaagcaacg
gtacctagcacgaaggttgcgactaacgtgagtttgagcaatgtaacaactacaacggca
aaagctcgaccgggaggaggacaaatgcaggacgtgagaacgacatcggcaaacgcgaat
atccagcaggcagctcaacgaactgcgacgagtttagtgtctgctggtcaaacttctgct
ggtgcggtaagtggtcaaaagggaggcctagtaggcgtcacgatggccacagcagcatcg
ggaaataagatcccaacgccagcacaagtgcagtactacaggcagcagcagcaacagcag
caagtattattgcggcagcagcaacttaaagtattgcaggctcaagccgctagcggtcaa
aaagtatctgtcgcggtgtcggctacggcggcagcagcggcagcggcacaacaacgagct
accttaatgaagcagggcattggttcggtcggtactgcgggtgccgcaacgccgcagact
gctgtgggcaaaccaacaatgactagaacactgtccgaaactgaaatagctgctgcgtta
ctgaagcggcaggcgttacagcagcaagcgaaggcggctgctgccgcagcggccgcgcaa
ggacaggtacctacgccaacgggacttacaccggcacagatcttcgctcaggctggtctg
caagtgcaacaagcagggacttccgcgggtggtactccggtagcgacacttgtgaagacg
actaatgtgccgggtgtccgtaccgcgactccccaacaaatccgacagcttgcaattcat
ccgcagattattacgcagagaaaactaccggcacagaaagtcgcgcagttagctcaagtc
gcaaataaagctggtgtgcaaacgcaactgatcgttcaacctactaaatcgctacctaca
accatgacagtacagcaaattcatcaagtaatgaaacatgtgcagccctcgacgatgcag
caatttagtcacgtctccacggggcaaacggtgtctcaggctagtcaagttgtattagct
aaatcaccgttgcagactcgtgtaataccagttgcacccgcatccctgaaacaaactatt
caagtggtgactgccagcaatcctcagttacgacagtccacgcctatccaaggaaaacct
gttactagtgcggtaagacgaagtcctggtccagggactagccccagtacaagcacaagc
ccgggtgcggcagtttccggttccacagttgctgcgggtaccagcccttccgtaggtgct
acttccgtgtctgcctcgaatctaacttctccatctgttcttggtcaagtgagattacaa
actttaacacagcaagtacaacagcaaacacaacagcaacaacaaactcaacaggatact
caaccaaaatag
DBGET
integrated database retrieval system
