Trachymyrmex cornetzi: 108759938
Help
Entry
108759938 CDS
T11212
Name
(RefSeq) RNA-binding protein squid-like isoform X1
KO
K03102
squid
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108759938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108759938
03041 Spliceosome [BR:
tcz03041
]
108759938
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108759938
Spliceosome [BR:
tcz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108759938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
NCBP3
Motif
Other DBs
NCBI-GeneID:
108759938
NCBI-ProteinID:
XP_018361171
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MADQQENKDFSDDVAEQNFEKNGEAESGNGGGGDAVENGQDSQEDRKLFVGGLSWETTDK
ELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVDPKK
AKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVV
NELLKTPKQTINGKAVDVKKATPKLDGMGGMRGGMMGRGRGARGGRGRGFGGQGGWGQGY
GGGYGGGYGQGGYGGGYDGYGGYDYYSGGYGGYGGYDYSGYGDGYGYGGGNYEGGYAGGR
GGVRGKGGSGYGGKQRGGGGGGGRQNQRHQPY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagcaagagaacaaggacttcagtgacgacgtagcggagcaaaatttcgag
aagaacggcgaggctgagagtggtaacggtggcggcggagacgccgtagagaatggtcag
gactcgcaggaggacagaaaattatttgtcggtggtttgagctgggaaactactgacaag
gaattaagggaacattttagcacttatggtgacattgagagtattaatgttaaaacagat
cccaacacaggaagatcgagaggttttgcctttattgtctttgcaaaggccgaagctctc
gataagattatgtcagctggcgatcatgtcattaacaacaaaaaagttgaccccaagaaa
gcgaaagctaggcatggaaagatcttcgtcggtggtctttcaacggaattgtctgatgac
gacatcaagaacttcttttcacaatttggaaacattgtcgaggtagagatgccatttgat
aagacaaagaaccaaaggaaaggtttctgctttattacatttgaatctgagcaagtagtc
aacgaacttcttaagacacccaaacagactatcaatgggaaagctgtggatgtaaagaag
gcaacacctaaattggatggaatgggtgggatgcgtggcggaatgatgggtagaggaaga
ggagctcgtggcggtcggggtcgcggattcggaggacagggtggatggggacagggctac
ggaggcggttatggcggtggctacggccaaggtggctacggcggtgggtacgacggttac
gggggatacgattactacagcggcggttacggaggttacggtggttatgattacagcgga
tatggtgatggctatggctatggcggtggtaattacgaaggtggctacgcgggcgggcgc
ggtggtgtacgcggtaaaggtggctccggttatggtggcaaacaaagaggaggaggagga
ggtggtggtcgccaaaatcagaggcaccagccgtactaa
DBGET
integrated database retrieval system
