Trachymyrmex cornetzi: 108760023
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Entry
108760023 CDS
T11212
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108760023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108760023
Enzymes [BR:
tcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108760023
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108760023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
108760023
NCBI-ProteinID:
XP_018361297
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MSIGPKLTNTSPNFGIPPDKQNELLQSLGVPHIDSFNYMLEDGLFYSLKDCTPVYLTLTN
GDKVVLWMDDVHIYKPTIPSSTIGVKTCKIYPTECRQRGSTYKGKIIARLGWSVNGKEQE
LLEKDLGEVPIMVKSNRCNLNNMNPEELIAHGEHEQEWGGYFIIRGLERLIRMLIMTRRN
YPIAVKRPTWKGRGDHFSELGILLRSVREDNSSINNTLHFVTDGSAKLAFTYKKVTYFVP
LILILKCLIDVTDLYIYKALIAGCEDDLYYKNNIINMLRAVHEEGLHWHEQCKAYIGKMF
KVKCSELSTDATNIDVCDYIIKYCISIHLEEPTDKFHLLVFMTKKLFTFANNKCAIESAD
AVMMQECLLGGHLYLQVLKEKLYSWLVGLKHHILKRDKSAGNRYALSVQEMLNVTKFRSN
IDSQMEYFLSTGNVRSSSGLGLMQTTGFTIVVENINRMRYMSHFRAIHRGAFFQEMRTTE
ARQLLPDAWGFICPIHTPDGAPCGLLNHLTMNCIITKHANPKLKAAIPAVLVDHGMIPLS
IADDWKNSYNVMLDGKLIGLIEDKIINKIVYKLRLLKIKGREIPSTLEIAFVPKKNVSAQ
YPGLFLFTNAARMMRPVINLAMQKIELIGTFEQIYMEICVNSQEAYEGLTTHQEISQTTI
FSNLANLIPLPDCNQSPRNMYQCQMGKQTMATPCHNWQQQSQTKMYRLQTPATPLFRPVH
YDNINMDDFAMGTNAIIAVISYTGYDMEDAMVINKSAYERGFGHGTIYKSEFVDLNDKKS
YFARDPERPDLEKTIDIDGLPRPRIIIKEGDAYYSYYDTDNAQYVIGRYRSTENAYIDNV
KLCGILNNQDPRRACITFRIPRNPTVGDKFASRAGQKGILSRLYPVEDLPFSETGMVPDI
IFNPHGFPSRMTIAMMIEVMAGKSAAIHGLVHDATPFRFDEESTAVDYFGELLELGGYNY
YGTERMYSGIYGCEMNASIFFGIVHYQRLRHMVSDKWQVRSTGPIDLLTRQPIKGRRRGG
GIRFGEMERDALISHGCSYLLQDRLFHCSDKITTLACHKCGSLLGPELIVTNRSDDDDKR
CRLCGEEDTVDEIEIPYIFKFLLIQLASCNINIKLKFRRV
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattggaccgaaattgacgaacacatcgccgaatttcggcataccgcccgacaaa
cagaatgagctattgcaatctctaggtgtgcctcacattgattcctttaattatatgctg
gaggatggccttttttacagtttaaaagattgtacaccagtatatttaactcttactaat
ggtgacaaggtagttctttggatggatgatgtacatatttataagcccactattccttct
agtacaattggtgtgaaaacatgtaaaatatatccgacagaatgtcgacaaagaggttct
acttacaagggtaaaataatagcaagactcgggtggtctgttaatggtaaagagcaagaa
cttcttgaaaaggatttaggagaagttccaatcatggtcaagtctaatcgatgtaacttg
aacaatatgaaccctgaagaattaatcgctcatggtgaacatgaacaagaatggggtgga
tacttcataatcagaggtttagagcgccttatacgtatgttaataatgacgagacgaaac
tatcccattgctgtcaaaagaccaacttggaaaggtcgtggtgaccatttcagtgagttg
ggtattcttctgcgaagtgttcgagaggacaactcttctattaacaatacactgcacttt
gtgacagatggttctgcaaaacttgcatttacatacaagaaagttacatattttgtgcca
ttaatactgatattaaaatgtttgatagacgtaactgatttatatatttacaaagcatta
atcgctggatgcgaagatgatctttattacaaaaataatatcataaatatgttacgtgcg
gtgcatgaagaaggtctacactggcatgaacaatgtaaagcttatataggaaagatgttt
aaagtcaaatgctccgaattgtctacagatgcaactaatatagatgtttgtgattacatc
attaaatattgtatctctattcatcttgaggaacctaccgataagttccatttacttgtt
tttatgactaaaaaactatttacttttgcgaataataaatgcgccattgaaagtgcggac
gctgtgatgatgcaagagtgtttattaggtggacacttgtatctccaagttcttaaagag
aaattatattcgtggctagtaggacttaaacatcatattctcaaacgtgacaaaagtgct
ggtaatagatacgccttaagtgtgcaggaaatgttgaacgtcactaaatttcgaagcaac
attgactcacaaatggagtactttttatctactggaaatgtaagatcatctagtggcctg
gggctcatgcaaactactggttttacgattgttgtggaaaatatcaatcggatgcgttat
atgagtcattttcgcgcgatacatagaggcgcattcttccaagaaatgaggactactgaa
gctagacaattgttacctgatgcatggggatttatttgtccgattcatacaccggatggt
gctccatgtggattactcaatcacttgacaatgaattgtatcatcacaaaacatgcaaac
ccaaaactgaaagccgcgatacctgcagtattagtagatcatggaatgattccattatct
atcgcggatgattggaaaaattcgtataatgtaatgttagatggaaaattgattggattg
attgaggacaaaattattaataaaatagtatataagctgagattgcttaaaataaagggt
cgagaaataccgtcaacattggagattgcatttgtgccaaagaaaaatgtttcagctcag
tatccggggttattcttatttactaatgctgctagaatgatgagaccagtaataaattta
gctatgcagaagattgaacttataggaacgtttgaacaaatttacatggaaatttgcgtg
aactctcaagaagcatatgaaggattaacaactcatcaagaaataagccaaacaacaatt
ttcagcaatttagctaatctcattcctttgccggattgtaaccagagtccaagaaatatg
tatcagtgccagatgggtaaacaaacgatggctacaccgtgccataattggcaacagcaa
tcacaaacgaaaatgtacaggctgcaaacacctgccacaccactctttaggccggtacat
tacgataatattaatatggatgattttgcgatgggtactaatgcaataattgccgttatc
tcatacacgggatatgatatggaagatgctatggtcatcaataagtctgcatacgaacgt
ggtttcggacatggaacaatttataagtccgagtttgttgatttgaatgataaaaagagt
tatttcgcccgtgacccagagagacctgatcttgagaaaaccatagatattgacggttta
cctagaccacgtattattattaaagaaggagatgcgtattattcttattacgataccgat
aatgcccagtatgtaattggaagatatagaagcacagaaaacgcttacatcgataatgta
aagctatgcggtatattaaataatcaagatccgcgaagggcgtgcattacattccgtatt
cctagaaatcccactgttggagataaatttgcgtcaagagcgggacaaaaaggaatcctt
tcgcggctatatcctgtcgaggatttaccgttttcggagactggaatggtccccgatatt
atattcaatccgcatggtttcccaagtcgtatgacaatagctatgatgattgaagtgatg
gctggaaaatcggcggctatacatgggttggtacacgatgctacgccctttaggtttgac
gaggagagtacagctgtggactacttcggggaattattagaacttggtggttataattat
tatggaactgaaagaatgtattcgggcatttatggatgtgagatgaacgctagtatcttc
tttggaattgtgcattaccaaagattgcgacacatggtctctgacaagtggcaggtgaga
agtaccggaccgattgacctgctaacaaggcaacctattaaaggtcgtcgacgcggtggc
ggtattcgatttggagagatggaacgagacgctctgatttctcatggttgctcatatctt
cttcaagatcgtctctttcattgctctgataaaataacaactttagcatgtcataagtgc
ggctctttacttggaccagaattaatagtaacgaatagaagtgatgatgacgataaaaga
tgtcgtctatgtggtgaagaagataccgtagacgaaatcgagataccatatatctttaaa
tttcttttaatacaactagcatcctgcaatataaacattaaattgaaatttaggcgggtg
taa
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integrated database retrieval system
