Trachymyrmex cornetzi: 108760136
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Entry
108760136 CDS
T11212
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03030
DNA replication
tcz03410
Base excision repair
tcz03420
Nucleotide excision repair
tcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108760136
03410 Base excision repair
108760136
03420 Nucleotide excision repair
108760136
03430 Mismatch repair
108760136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcz03032
]
108760136
03036 Chromosome and associated proteins [BR:
tcz03036
]
108760136
03400 DNA repair and recombination proteins [BR:
tcz03400
]
108760136
DNA replication proteins [BR:
tcz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108760136
DNA Replication Termination Factors
ELG1-RFC complex
108760136
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108760136
DNA repair and recombination proteins [BR:
tcz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108760136
Check point factors
HRAD17(Rad24)-RFC complex
108760136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA_16
AAA_22
Rad17
AAA_11
DUF815
AAA_14
AAA_30
RuvB_N
AAA_7
bpMoxR
ResIII
AAA_assoc_2
AAA_19
Mg_chelatase
AAA_5
AAA_2
DNAX_ATPase_lid
SLFN-g3_helicase
nSTAND3
AAA_24
Bac_DnaA
TniB
Gp44_lid
PhoH
RNA_helicase
NB-ARC
AAA_3
MCM
ATPase_2
AAA_28
Motif
Other DBs
NCBI-GeneID:
108760136
NCBI-ProteinID:
XP_018361439
UniProt:
A0A151J8F8
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MHAFLKTGKLGAPAAEVKKPSTSQAKDNKKDLTPWVEKYRPKNVDDIVEQTEVVNVIRQA
MEHGDFPNMLFYGPPGTGKTSIIHAAARQMFDSMYKDRILELNASDDRGIQVVREKIKSF
ALRRANPIGPDGKKCPPFKIIILDEADSMTGAAQTALRRIMEKESHSTRFCLVCNYLSRI
IKPIASRCTKFRFKPLSDEKSITRLEYICNEENLKADKSVLQKIVEASGGDLRQAVMCLQ
SITRLKGKDCEITADDALDVIGLIPDEQINVLWEACKKGNYINVQKSLENLLLEGYPGAK
VIEQLNERIIFSDELTDKQKAIIGDVLGECDYRLTEGSDEYIQLLNVFSTTLMTCK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttttttgaaaaccggaaaactgggtgctccggcagcggaggtaaagaaaccg
tcgacctctcaggccaaggacaacaagaaggacctgacgccatgggtggaaaaataccgg
ccgaaaaatgtcgacgatattgtggaacaaacggaggtggtgaacgtaatacggcaggca
atggaacatggagattttcccaacatgctgttttatggaccaccaggtacaggcaagact
agcatcatccacgcagccgcgaggcagatgtttgatagcatgtacaaggacaggatactg
gaactgaatgcttctgatgacagaggtattcaggttgtaagagaaaagatcaaatccttt
gcgttgcgcagagctaatcctattggaccagacggaaagaaatgtccgccattcaagatt
atcatcctagacgaggcagatagtatgactggtgccgcgcaaacagcccttcgtcgaatt
atggagaaagagtcgcacagtacgcgcttttgtttggtgtgcaactacctgtcacgaatc
atcaagccgatagcgtcgcgttgtacgaaatttcgatttaagccactgagcgatgagaag
agtattaccaggctcgagtacatatgcaacgaagaaaatctaaaagccgataaaagcgtc
ttacaaaaaatcgttgaagcatcaggtggtgatttaagacaggctgtcatgtgtttacaa
tcgatcacgcgattgaaaggaaaagactgtgagatcaccgcagatgatgcactcgacgtt
atcgggctaattcccgatgaacaaattaatgtactgtgggaagcttgtaaaaaagggaat
tacattaatgttcagaagtcacttgaaaatttgctgctggaaggatatccaggtgcaaag
gtaattgaacaattaaacgagagaattattttctccgatgaattaactgacaaacaaaag
gcgataattggcgacgtgctcggcgaatgtgattatagattaacagaaggaagcgatgaa
tatatacaactgttaaatgtgttttctactactttgatgacttgcaaatga
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integrated database retrieval system
