Trachymyrmex cornetzi: 108760423
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Entry
108760423 CDS
T11212
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108760423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_R13L1-DRL21
LRR_NLRC4
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
108760423
NCBI-ProteinID:
XP_018361883
UniProt:
A0A195E7Y9
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MKKSCKHCTSVSNISTVCLPKTNRNRATSLGDDSLLNLDMKEQDIPEYLEGCGLSACTAS
NEISEDVELQLMHDKKFSTMSSFGSSSSSSLVDSKKIVMIKHPDSNKLKPAGKKTKPIQA
ELDVGKEFIRCREDCVKRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLS
NLETLALSENSLTNLPNTLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKY
VKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTL
DVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQISHLPDGL
LASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSKNLTKLNM
KENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHIPTTIVN
LQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNKLTELPRTIGHLRNLTYLSVGENQL
TYLPEEVGTLESLESLYLNDNKSLHNLPFELALCKNLGIMSIESCPLSHIPMEIVAGGPS
LVIQFLKMQGPYRPT
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcgtgcaaacactgtacaagcgtgagtaacatatcgacggtgtgtctgccg
aagacgaatcgtaatcgtgcgacgagtctcggggacgacagtcttttgaacctcgacatg
aaggagcaggatatacccgagtacctagagggctgcggattatcggcttgtacggccagc
aacgagatatccgaggacgtggagcttcaactgatgcatgacaaaaagttctccaccatg
tcgtccttcggaagtagcagtagtagcagtctggtcgactccaagaagatcgttatgatc
aaacatccggactcgaacaaactgaaacccgctggtaagaagaccaagccaatccaggcg
gagttggacgtgggtaaggagttcatccgatgtagggaagactgcgtgaagcggttggac
ctgagcaaggcttgtatcacgactttgcctagttccgtgaaggaactgaagcacctgcgg
gaattctacctctatggcaacaagctgacgactctgccacccgagatcggctatctgtca
aatctggagacgctcgcactgagcgagaactcgctcaccaatttgcccaacactctggag
aacctcaagtcgctgcgggtactagatctcagacataacaagctcatcgtgattccagac
gtagtgtacaagctcacatcgctcaccacgttgttcctgcgctttaaccgtgtcaagtac
gtcaaaaacaatatatgtaatctgacgaatctcaccatgctgagctttcgggagaacaag
atcaaggaactgcctgcagggataggcgagctggtcaatcttctcacctttgatgtctcg
cataatcatttggagcatctacctccggaaattggcaagtgtgtgcaattgtccaccctg
gatgtgcaacacaacgaactgctcgacttgccggatacgatcgggaatctggtgtcgttg
acgagactaggaatccgatacaataaactgacaagtattcctaaatcattggcgaactgc
aagttgatggatgaattcagtgtagagggcaatcaaatatcgcatcttccagatggactg
ctggctagtctgtcatatcttacgacaatcacgctgtctagaaacttatttacctcgtat
cctgcaggtggtccaggtcaattcgtcaatgcttattccatcaatgtagagcacaatgag
attgacaagataccctacggcatcttctcaagatccaagaacctcacaaaactgaacatg
aaggaaaataaattgaacactttgccactggatatcggttcgtgggtggccatggtcgag
ctaaaccttggaacgaatcagttgacaaagctcccagatgacatacagtgcctgcaaagt
ctggagatactgattctctctaacaatggactgaaacatattccgaccactatagtgaat
cttcaaaagctgcgggtgctggacctggaggagaattacattgacgtgttgccgaacgag
attggcttgatgaccgagttgcaaaagctgatcttacagtcgaataagcttaccgagttg
ccacgcacaatcggtcatctgaggaatcttacgtatctcagcgtgggcgaaaatcaacta
acttatttgccggaggaggttggcaccttggagagcttagagtcactctacctcaacgac
aacaagtccttgcacaatctgccatttgaactggcgttgtgcaagaatctcggtattatg
tcaattgaaagttgtccgctgtcgcatataccaatggaaattgtagccggtggaccatca
ctggtgattcaatttcttaagatgcagggtccttatcgaccaacataa
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