Trachymyrmex cornetzi: 108760458
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Entry
108760458 CDS
T11212
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108760458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108760458
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108760458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108760458
NCBI-ProteinID:
XP_018361962
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MVEGIPSTYIYHGIYERYKRSLARTLVNAGGKAGKMADESEDQWLYGDSTDGKEYTSTNI
QSEIQQNDSTLSEVQDNLQIREDQKMEGAGEIPSEMQEVTDSLGDGDEESSLLNNAQEEN
LEASKNGTRDVSSQEDGEAASESDSDDDVHVVIGDIKSAPTYGNLNIKRGGLLTNTSGVS
DKLNKQPGKFSIDEFETIGVINGIPAHEFNLDQLEDKPWRQPGADITDYFNYGFNEDTWR
AYCERQKRMRSESGVGLVLNAGSGSGNPSGMRMPQVAITNDNSKYSGIMGPKRAGPPPGR
KMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRREYSRKPGFPDMSVPPPGAGMPP
PPFDVPPPGYAGEPTPFYMPETDPYYQSYEPTQDNQWGNDPTWQPTNLAIPMTEGEDDKD
MGPKTIPTMVPPTNIPPLMQPRDQRDGRDRERDRDRDRDRELDSMSRDRDKDRDRDRDRE
KDSMMRDRDRDSVTRDEDRERDRSRSQYRHKDRHRHRSRSRSRRHKSRSRSPTRSRKKKS
RRSDRERSKEESE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagggattccttctacctacatttaccatggtatatacgagcggtacaagagg
tctctcgcaaggactttggtaaatgcaggaggtaaggcaggaaaaatggcggatgaaagt
gaggatcaatggttatacggggattcaacggacggcaaggagtatacatcgacgaatatt
caatcagaaattcagcaaaatgattcaacactctccgaagttcaggataacttgcaaatt
cgggaggatcagaaaatggaaggggctggtgaaataccgtccgagatgcaagaagttacc
gactcccttggcgatggtgatgaagaatcttctttgttgaataatgcacaagaagagaac
ttagaagcaagtaaaaatgggacgagagatgtctctagtcaggaagatggcgaagctgcc
agcgaatctgattccgatgatgatgtacatgttgttattggcgatatcaagtcagcacca
acatatggtaatttaaatatcaagagaggaggattgctaacaaatacgtctggtgtatca
gacaaactgaacaaacagccaggaaagttcagtatagatgaatttgaaactatcggcgtt
atcaatgggataccagcccatgagtttaatttagatcaattggaggataaaccatggaga
caacctggtgcagatatcacagattatttcaactatggtttcaatgaagacacctggaga
gcgtattgcgaacgtcagaagcgaatgcgaagcgagtctggagtgggattggtcttgaat
gcaggtagtggcagtggtaatccaagtggcatgagaatgcctcaagtggcgataaccaat
gacaacagcaaatactctggcattatgggtcctaagagagctggcccaccacctggaagg
aaaatggcagggactatagatgttataggaagctctggtttagcttctagaagaaatctg
gataaatccccaccaaagggaaatgttatacaagtcatgactgccgacagaagagagtat
tctagaaaaccaggtttccctgacatgagtgtaccacctcctggagcaggaatgccaccg
ccgccattcgacgtacctccaccaggatatgctggagaaccgacaccgttctatatgcca
gaaactgacccgtattatcagagttatgaacccacacaagacaaccaatggggcaatgac
ccaacatggcagccgacaaatctggcaatcccaatgactgaaggtgaagacgacaaagat
atgggacctaagacgatacctacgatggttccaccaacaaacattccaccgctgatgcag
ccgcgcgatcagagggatggtagagaccgggaacgagacagagatagggatcgcgaccgg
gaattggattccatgagcagagatagggacaaggatagagatcgcgatcgtgatagagaa
aaggattccatgatgagggatcgtgatagagactctgtgacgcgagatgaggatcgagag
cgtgatagatccaggtctcaatatcgacataaagatcgacatcgacatcgatcaagatcg
cgatctcgtagacacaagtcaagatcacggagtccaactcggtcgcgtaagaagaaatct
agacgctcggatagagagcgttccaaggaagaaagtgaataa
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integrated database retrieval system
