Trachymyrmex cornetzi: 108760496
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Entry
108760496 CDS
T11212
Name
(RefSeq) probable nucleoporin Nup58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108760496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108760496
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108760496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
SKA1
META
Motif
Other DBs
NCBI-GeneID:
108760496
NCBI-ProteinID:
XP_018361994
UniProt:
A0A151JRA3
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAFTFGSPAVTSPNTGFGFAAQKPATGFGLANASFGTPTTTSGTLTFGALSTPTTSIGLN
FGFGTPATSTPAQCSNLLLGSNTATTMTTAPSLFPTPTTSTPLFTGLSFGTPATTNTLTF
GAPSNTTATGSLTFGTATTNTPLFGSGTGSTLLGSKPTTVLTTTTTTKGLGGLDVSVNNK
GLSQGNSSSTAAKENLLPNELMQTIDRFKEFVKMQKGLSSDIARGSARPLNRCAEDTASL
MEMLSTLSGSVQRDRSSADKLKQDTARALQSAEIAQRTHDTPAGLQYENNMPLQFFMELA
ESFEQDLMLFRSQIETTEKHIQTMMAPRTLTPQELTATMSKLHESLVAVAGRLQSVHAKV
QQQKEQYLNFRKYLLKDNTNVFDGIKVNSKSNRSSISKITSGPTPFGPGNKNFLSSTTLN
SNRPASYETRNPLVWESSTPVPSATNIAIGSSTKPPTASLNFNAPINLTSPLPVNGTSSN
FQLQKPPVGNKRGKH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacattcggaagtccagcggttacctctcctaacacgggttttggatttgcg
gcgcaaaaaccagcgacaggcttcggtttggccaacgcgtcgtttggtactcccaccaca
acatctggcacattaacatttggtgccctgtctactccaacgacttctataggtctcaat
ttcggatttggtactccagcaacctctactccagcacaatgcagtaatctccttttagga
tccaacacagctactacaatgactaccgctcctagtttatttcctactcctacaacatcc
acacccttattcacgggtctcagctttggtacaccagctacaacgaacactctaactttt
ggtgccccatctaatacaacagcaacaggaagtttaacttttggtacagctactaccaac
actcccttattcggatctggaactggaagcactttattgggttcgaagccaacaactgtt
cttactactacaactactactaaaggacttggtggtttagatgtttctgttaataataag
ggtctttctcaaggaaatagtagttcaacagcagccaaggagaatctattgccaaatgag
cttatgcaaactattgacagattcaaggaatttgtaaaaatgcaaaaaggcctgtcttct
gatattgcaagaggttctgcaagaccattaaatcgatgtgcggaagatacagcgtcccta
atggaaatgttgtccacgttatctggttcagtgcaacgagatcgttcttcagctgataag
ctaaagcaggatactgctagagcgttgcagagcgctgaaatagctcaaagaacacacgat
actccggctggcttgcaatatgaaaataatatgcccctacagttcttcatggaattagct
gaaagtttcgaacaagatttgatgttattcagatcacaaattgagacaactgagaaacac
atacaaaccatgatggcaccgagaactttaacgccacaagaattgacagcaaccatgagt
aagcttcacgagtctttagtcgcagtagctggccgactgcaaagtgtacatgctaaagta
caacaacagaaggaacagtatctcaatttcaggaaatacttgttgaaagataacaccaat
gttttcgacggtatcaaagtgaacagtaaatctaatcgaagcagcattagcaaaatcaca
agtggtcccactccttttggaccaggaaataaaaactttttgtcatcgacaacattaaac
tcaaatcggccagcaagttacgaaacacgaaaccctttagtttgggaaagttcaacacca
gtaccatctgctactaatattgctataggctcatctacgaaaccgccaacagcaagttta
aattttaacgcgccaattaatttgacttcaccattgccagtaaacggaaccagctcaaac
tttcaacttcaaaagcctcccgttggtaataaacgagggaaacattga
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