Trachymyrmex cornetzi: 108760506
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Entry
108760506 CDS
T11212
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108760506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108760506
Membrane trafficking [BR:
tcz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108760506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
Motif
Other DBs
NCBI-GeneID:
108760506
NCBI-ProteinID:
XP_018362007
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVSLFFSQPMTPGITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDEEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREELRILVGTNLVRLSQLESVT
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIATIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLFMV
SSLVQDQSDQPNIEEDPEDFAEEQGLLGRLIHHFRSETPDQQYMILSAARKHFSAGGNKR
IKFTLPPIVFQSYQLAFTYKALKDQDDMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGSKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTVVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESPDSDGLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttgtttttctcgcagccaatgacacctggtataacgggaatggaggaacag
gagaaattgctagaagatgcaattggagtggtaaaagtccaagcttttcagatgaaacat
tgtctggacaaatccaaattaatggatgctctaaaacatgcctctaccatgttgggagaa
cttagaacttcccttctaagtccaaaaagctattatgaattgtatatggcaatcacagat
gaattacggcacttggaactttatttgttggatgaatttcaaaaaggaagaaaagttaca
gatctctatgaattggtacaatatgttggcaatatcgtacctagactgtatttacttatc
actgttggtctggtttatatcaagacaacgcctggtttgaaaagagatcttctgagagac
cttgtagaaatgtgtagaggcgtgcaacatccactgcgtggtctattcttaaggaattat
ttgttgcaatgcacaaggaatatcttgccagatgtcaccgagggtgatgaagaagatgga
actgttcgtgacagcatagatttcgttctgatgaattttgcagaaatgaataaattgtgg
gtacgtatgcaacatcaaggtcatagtagggacagagaaagaagagagagggaaagggaa
gagcttcggattctagtcggaacaaatcttgtacgacttagtcaattggaatctgtaaca
ttggataaatacaaaaagcttgtactgccgggaatcttggagcaagttgttagttgtaga
gatgcaatagcacaggaatatcttatggagtgtataattcaagtctttcctgatgaattt
catttacaaacgttaaatgcatttctgaagtcgtgtgcagaattgcaaaatggagtaaat
gttaaaaacataattatatcattgattgatcgacttgcagccttcagtcaacgatccgat
ggtgtaggaggaccgggaagtccaaatcaagtgccaggaattccacaagacgtcaaactg
ttcgacgtatttagtgatcaaattgcaactatcatacagacaagacaagatatgcctcct
gaagatattgtgtccctccaagtggctcttataaacttagcacataaatgctatcccgat
cgtgtggattacgtagataaagttttgtttacaacagttcaaatatttcagaaacaaaac
gtcgataaattggagtacaatagtgctgtttcaagagaactagttagattaatgaaaatt
cccgtagacaattataaaaatatattaacagtccttaagcttgaacactatgcgcctctt
ttggattatttcgattatgagggcaggaaatcactagctatatatataataacgaatatt
ttagagaatgaaacattgattccaatgcaagagcaagtagatgcagtactcttcatggta
tcttccttggtacaagatcaatcagatcaacctaatatagaagaagatcctgaagatttt
gccgaagaacagggattgctcggaagattaatacatcattttagatcagaaacaccagat
cagcaatatatgatactaagcgctgcaaggaagcatttcagtgctggcggtaacaaaaga
ataaaattcactctacctcccatagttttccaaagttatcaattagcatttacatacaaa
gcactgaaagatcaggatgacatgtggcaaaaaaagtgtcaaaaaatttttcagttttgc
cacacgactatcacagcattgatgaaggctgaattagccgaactacccttaaggctattt
ctacaaggcgcaatagcgatcggtgaaatccgttttgataattttgaaatggttgcttat
gagttcatgagccaagcattttcgatatatgaagatgaaataagtgactcgaaagctcag
ctcgcagctattaccttgatcattgctacattcgaacaaatgagttgttttggtgaagaa
aacgcagagcctgtacgcaatcagtgcgctttatatgctagtaaattattgagaaagcct
gatcagtgtagaggagtcgctacttgttcacatatattttggtctggaaaatctttggct
acgggcggaaaagagatgcaagaaggcagcaaagtgttggactgcttaaaaaaaggtatt
aggatagcaagccagtgcatggacacgtctgtgcaagtacaactgtacgtggagctgctg
aatcattacatttacttctacgaaaaaggaaacacagttgtaaccgtgcaaatattaaat
caagtgattgctaaaattagagaggaacttcccaatctagaagcgagcgaagaaaccgat
caaatacagaaacatttagcaaatacgttagaacatttaagaaataggatggaatcacca
gattccgatggactttcttaccaaggtctcgtcctttaa
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