KEGG   Trachymyrmex cornetzi: 108761018
Entry
108761018         CDS       T11212                                 
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108761018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcz03019]
    108761018
Messenger RNA biogenesis [BR:tcz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     108761018
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Ge1_WD40 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_ACSF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Nup120_160 eIF2A Tricorn_2nd PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_IFT140_1st Cytochrom_D1 RMC1_N Beta-prop_DCAF4 MIOS_WD40 WD_LRWD1 Beta-prop_pof12 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 108761018
NCBI-ProteinID: XP_018362833
LinkDB
Position
Unknown
AA seq 337 aa
MCRMNRISLKSEYALTHKTENAHEDSIWTCGWGCPKRKKEHLDNEDSRDSVQSNEDETTE
YLVTASVDDSVKVWELKEDALKLKHKLTGYSLGVVSIAISSDGSKCASSSLDSSLKLWDL
YSGDKLLSIEVGPVDIWTLVFSPDDKFIVSGSHAGKIHLYGTDNGKQEQTLDTRGGKFTL
SVAYSPDGKYIASGAIDGIINIFDVAYGKVLRTLEGHAMPIRSLCFSPDSQLLLTASDDG
HMKLYDVKDANLAGTMSGHASWVLGVAFSPDGQQFASSSSDHTVKIWELAQRQCLHTFRE
HKDQVWSVKYNPQRNNIIASVSEDKSINLYECPIYEK
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtgtcgaatgaaccgaatttcattaaaatcggagtatgctttaactcataaaacagaa
aatgcccatgaggatagtatatggacttgcggatggggttgtccaaaaaggaagaaagaa
catctggataatgaagattcacgtgattctgtacagtctaatgaagatgaaacaacagaa
tatcttgtaacagcttctgtggatgattctgtgaaagtatgggaactgaaggaggatgct
ttgaagttaaaacataagttaactggatattccttgggagttgtatctatagctattagc
tcagatggatcaaaatgtgcctcaagttcacttgattcaagtctgaaattatgggactta
tattctggtgataagttattgagcattgaagttggtccagtagatatttggactttagtc
ttttctccagatgataaattcattgtatctggcagtcatgctggtaaaatacatctatat
ggaactgataatggtaaacaagaacagactttagatacaagaggtggaaaatttacatta
agtgtagcatatagtcctgatggtaaatatattgcaagcggcgcaatagatggtattatt
aatatttttgatgttgcctatggaaaagttttacgtaccttggaaggtcatgcgatgcct
atcagatctttatgtttctcacccgactctcagttgcttcttacagcatctgatgatgga
catatgaaactatatgatgtcaaagatgcaaatctagcaggaacgatgtcgggtcatgct
tcttgggtacttggtgtggctttctcaccagatggacagcaatttgcatcaagtagttcc
gatcatacagtcaagatctgggaattagcacaaagacaatgtttgcatacatttcgtgaa
cataaggatcaagtctggtcagttaagtataatccacagcgaaataatataattgcgtca
gtatctgaggataaatctattaatttatacgaatgtcctatatatgagaaataa

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