KEGG   Trachymyrmex cornetzi: 108761040
Entry
108761040         CDS       T11212                                 
Name
(RefSeq) host cell factor isoform X1
  KO
K14966  host cell factor 1
Organism
tcz  Trachymyrmex cornetzi
Pathway
tcz03083  Polycomb repressive complex
tcz04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108761040
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    108761040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tcz01009]
    108761040
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcz03036]
    108761040
   03029 Mitochondrial biogenesis [BR:tcz03029]
    108761040
Protein phosphatases and associated proteins [BR:tcz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108761040
Chromosome and associated proteins [BR:tcz03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     108761040
   HMT complexes
    COMPASS/SET1 complex
     108761040
    MLL-HCF complex
     108761040
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     108761040
Mitochondrial biogenesis [BR:tcz03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    108761040
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 fn3 Kelch_FKB95 NANM Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 108761040
NCBI-ProteinID: XP_018362861
LinkDB
Position
Unknown
AA seq 1595 aa
MAAPMLKWKRIANPPGPQPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRIFVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKHE
PPPCPRLGHSFTLIGNRVFLFGGLANDSDDPKNNIPRYLNDLYTLELLPNGHTAWDVPQT
HGHAPPPRESHTGVAYTDRTTGKSCLVIYGGMSGCRLGDLWFLDVDSMTWNKPVVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVGVHSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPAAPSRVQL
IRASTQSLEVSWTASPSAQYYILQIQKYDMPPIAATGSAYPLVSAPTPTAPIVSTPVAVT
TSAMVATPTVPVTSPPVTTIAALPSTTPPVAAAVRASVATAVATAVATPLRVQSASPVQK
PVPSQAVQKSTSPITPRVATGNVIRIRSPLVTSSAAVATAAVAVVTTEQQQTTVTTITTT
TTTTAGQTPAAMSGIAALAAAAAATPKITMNNVSIVPQTAVAAATASNTIRMKNVQPGQQ
IRFAAPGATVLRTASPQQSKQIILQKPGQNIAGQPQIVHLLKAGQGMVVPKVSLIPGKSV
QATGTKPLNQGPTILRLVNPNTVAGSKILTTMKTSNIVAMSKGQNITGKQTIMITKPTGN
SGLVGRTNQFIVVTTGSGLRAVQAVTTSQAGAGQGATSVATPVNVLPLSATNHVTNQQGV
KMIVVSSGAMGGGTAGKPLTITVPGQGGVPKTVTIAAKTGAQTIFNTGKNQLVTVPQIQK
APEAVAVSGKPVTLQMPAGISAKTVTLLPTSSSSIVTTSSASDSIDASKMLFVSSQKQPS
ASLASTSDGPATTDAALAALAAEAGLIDPVQESSGGLSFMVATDDGASGDDKMEDSCNGN
EATTAAALVSQMGAGEPMQVDGDGNFVLPQVDGPIDDLLLEDEEKMDIDEEPAAENATES
SNAESSEVTEQNVDVSENIQTEESAVKEVAEAGEKNEEATTADLPESITTSETEKAEDVD
NSSVDDKAAMEINADDSELPSEKEEMKDSQSVVDDEKVVKSELPLVQSAVEASSEQTSLT
DVVNPITEIDETQQDEDSLVKDIKCESLSENEKSLISENLTEDTDASHQPQDETQKIEIK
DEIEDLESDLPTESSLIKSNEDDEPMITDNSTSIAADNVITPVIIPTIQMKSEPEDEFIK
HEQAILPDLPISPINGVAAPVEKEMEKVRTPMKMELKDDFVISKKENLQKEKQDKINDAR
SETGDDSTALTTLATAALGSAEPTMKIKNEQSEEEKKEAEWYDVGVIKGTSFTVQHYYLS
GDEPLDVTQNLTMDVFKGRTKIAVEPGTAYKFRVAAVNSCGRSAWSEVAAFKTCLPGFPG
APSAIKISKSIDGAQISWEPPSSNVGPILEYSVYLAVRSTALNNDGEPKTVVSNPNQLAF
IRVYCGSSNSCSVNNSALNAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQADPTTAV
KSNSQAKRPASTDLRSQVTSPQKKMKTEPPSDNFS
NT seq 4788 nt   +upstreamnt  +downstreamnt
atggcggcacccatgctaaagtggaagcggatcgcgaatccgcccgggccccagccgcga
cccaggcatggccaccgggcggtcgccattaaggatctcatggtcgttttcggcggtggg
aatgagggtatcgtcgacgagctacacgtatacaatacggcaacaaatcagtggtttgtg
ccttcgacgaagggagacattcctccaggttgtgcagcatatggcttcgttgtcgatggc
actcgcatctttgtctttggtggaatggtggagtatggcaaatattccaacgagttgtat
gaactacaagcgagtcgatgggagtggaaacgtttgaagccaaagccacctaagcatgaa
ccaccaccatgtccacgattaggacatagttttacccttattggtaatagggtcttcctt
tttggaggtctggcgaatgacagtgatgacccgaaaaataatataccgagatatttgaat
gatttgtacacgctcgaacttcttcctaatggccatacagcctgggatgtgccgcaaacg
catggacacgcgccacctcctagagaatcccataccggagtggcatataccgatcgtacc
acaggcaagtcttgtctggtgatctatggtggcatgagcggttgccgtttaggtgacttg
tggttcctcgatgttgattcgatgacttggaacaagccagtggttcatggacctacccct
ttaccacggtcactccatactgccactttaatcggtcatcgaatgtatgtatttgggggt
tgggtgccattggtcgtcgacgacgttaaagtcgcgacacacgagaaagagtggaaatgc
acaagcacgctagcatgcttgaatttagaaactctcacttgggaacaactgaccgttgat
tccttggaggagaatgttcctcgtgctcgtgctggtcattgtgcagttggtgtacacagt
agactttatgtatggtctggtagagatggttaccgcaaagcttggaataatcaggtttgt
tgtaaagatctgtggtaccttgaagtcagtaaaccagcggcaccttccagagttcagctg
attagggcttccacgcaatcgttggaagtcagctggacagcaagcccgtccgcgcaatac
tatattcttcaaatacaaaagtatgacatgcctccaatagcggcaactggtagtgcctac
ccgttggtaagcgcaccgacgccgactgcgcctatcgtcagcactcctgttgcggtaaca
acctctgcaatggtagcaactcctactgtacctgtcacatctccgcctgtgactactatt
gccgctcttccatcgactaccccccctgttgctgctgccgtcagagcatccgttgcaaca
gctgtggcaacggcagtagcaactccattacgagttcaaagtgcaagtcctgtgcaaaaa
ccagtaccatcgcaagcagtgcaaaagtcgacaagtcctataaccccgagagtcgcaacc
ggtaacgtcatacgtattcggtctcctctggtcacttcctcagcagcagtggctacagca
gcagtggcagtggttaccactgagcaacaacaaacaactgttactactatcactactacc
actacaactacggctggtcaaacgcccgctgccatgtctggaatcgctgctttggccgca
gccgcagcagccactccaaaaattactatgaacaatgtttcgattgtgccacaaactgca
gttgcggctgcgactgcatccaatactatcagaatgaaaaacgtacaaccggggcagcaa
atacgtttcgctgcacctggcgcgacagtgttgcgcactgcttcaccacagcagagcaag
cagatcatattgcaaaagcccggccaaaatatagccggtcagccacagattgtgcatctt
ttgaaagctggacaaggaatggtggtacctaaagtaagcctcatcccaggcaaaagtgtc
caagcaaccggcacgaaacctcttaatcagggaccgacaatactgcgattggtaaatcct
aatacggttgcgggatcaaaaatcctcacgactatgaaaacgtccaacatagtagcgatg
agcaaaggacagaacattacgggcaagcaaaccataatgatcaccaaaccgacaggaaac
agtggattagtcggcagaaccaaccaatttatcgttgttaccacaggctctggtctaaga
gctgtacaagctgtaacaacatcacaagctggtgcaggacaaggagctacttctgtagct
actcccgtaaatgttttaccattatcagctaccaatcatgtcacgaatcaacaaggtgtc
aaaatgattgttgtttcctctggtgcaatgggtggtggaacggctggaaaacctttaacc
attacagtcccaggacaaggtggtgtaccaaagacagtgactattgctgcaaagaccggt
gcgcaaaccatctttaatactggcaagaatcaactcgttacagtaccacagatacaaaag
gcacctgaagccgtagctgtatctggaaaaccagtgactttacaaatgcctgcgggtata
agcgcaaagacggtgacgcttttaccaacaagtagtagctccatagtaactacttctagc
gcgtcagattcaatagacgctagtaaaatgctatttgtttcatcgcaaaaacaaccatcg
gcttctttagcatctacttctgatggccccgctactaccgatgctgcattagctgcatta
gcggcagaagctggtctgatagatccggttcaggaatcatctggtggtttatcattcatg
gtagccacggatgatggtgccagcggtgatgataaaatggaggatagctgtaatggtaac
gaggcaaccacagcggctgctttagtttctcagatgggtgcaggagaaccaatgcaagtc
gacggtgacggaaattttgtgcttccgcaagtagatggtccgatagacgatctcttacta
gaagatgaagaaaaaatggatatagatgaagaacctgctgcggaaaatgctaccgaatcg
tctaacgctgaatcgtcagaagtaacagaacaaaatgttgatgtatctgaaaatattcaa
acggaagaatcggctgtaaaagaagttgccgaggctggagaaaagaatgaagaagcgaca
acagccgatcttcctgaatcgattactactagtgaaaccgagaaagctgaagatgttgat
aattcatcagtagatgataaagcagctatggaaattaatgctgatgattcagagttacca
agtgaaaaagaagagatgaaggattctcagtcagtagtcgatgatgaaaaagtagtaaaa
tctgaattgcctttagtacaatcagccgttgaggcttcatccgaacagacttctctaacg
gacgttgtgaatccaataacggaaatcgacgaaactcagcaagatgaggatagcttggtg
aaagacattaagtgtgaatcgttgtctgaaaacgaaaaatcgctaatatctgaaaatctt
accgaagacacggatgcatcgcatcaaccccaagacgagactcagaaaattgagataaaa
gacgaaattgaagacctggaatctgatcttccaaccgagagttctcttataaaatcgaac
gaagatgatgaaccgatgattactgataacagtacatcgattgcggcagataatgtaata
actcccgttattataccaaccattcaaatgaaatcagagccggaagatgaatttataaaa
cacgaacaggctatattgcccgatttgcccatttcaccgatcaatggtgtcgctgcacct
gttgagaaagaaatggaaaaagtacgtactcctatgaaaatggagttaaaggatgacttt
gtcatttcaaagaaagaaaatcttcaaaaagagaaacaagataagattaatgatgccaga
tcagaaacaggagatgattcaacagctttgacaacattagctactgctgctttaggatcg
gcagaaccaacgatgaaaataaaaaatgaacagagcgaagaagaaaagaaagaggcagaa
tggtatgatgtgggagtgataaaaggaactagttttactgttcagcattattatctttct
ggtgatgagccattggatgtaacacagaatttgacaatggatgtttttaaaggaagaact
aaaatagcagtagaacctggaactgcctacaagtttagagttgccgctgtgaatagttgt
ggacgaagtgcttggagcgaggtagcagcattcaagacgtgtcttccgggattcccgggc
gcaccgagtgctataaagatatcaaaatccatagacggtgcacaaatttcttgggaacca
ccttctagtaacgttgggcccattctcgaatattccgtctatttggcagtgcgaagtacc
gcgttgaacaatgacggagaaccaaaaacagttgtatcgaatccaaatcagttagctttt
attagagtttattgcggttcgagtaattcttgttcggtgaacaatagtgcccttaatgcc
gctcacgtggacaccactacgaaaccggccataatctttagaatagcagcacgaaacgac
aaaggatacggaccagctactcaagtcaggtggttacaagcagatccaaccactgcagta
aaaagtaattcgcaagcgaagagacccgctagcacagatctacgctcgcaagtgacttct
ccacagaagaaaatgaaaacagaaccacctagtgataatttctcgtga

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