Trachymyrmex cornetzi: 108761040
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Entry
108761040 CDS
T11212
Name
(RefSeq) host cell factor isoform X1
KO
K14966
host cell factor 1
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03083
Polycomb repressive complex
tcz04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108761040
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
108761040
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcz01009
]
108761040
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108761040
03029 Mitochondrial biogenesis [BR:
tcz03029
]
108761040
Protein phosphatases and associated proteins [BR:
tcz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108761040
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108761040
HMT complexes
COMPASS/SET1 complex
108761040
MLL-HCF complex
108761040
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108761040
Mitochondrial biogenesis [BR:
tcz03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108761040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108761040
NCBI-ProteinID:
XP_018362861
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MAAPMLKWKRIANPPGPQPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRIFVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKHE
PPPCPRLGHSFTLIGNRVFLFGGLANDSDDPKNNIPRYLNDLYTLELLPNGHTAWDVPQT
HGHAPPPRESHTGVAYTDRTTGKSCLVIYGGMSGCRLGDLWFLDVDSMTWNKPVVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVGVHSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPAAPSRVQL
IRASTQSLEVSWTASPSAQYYILQIQKYDMPPIAATGSAYPLVSAPTPTAPIVSTPVAVT
TSAMVATPTVPVTSPPVTTIAALPSTTPPVAAAVRASVATAVATAVATPLRVQSASPVQK
PVPSQAVQKSTSPITPRVATGNVIRIRSPLVTSSAAVATAAVAVVTTEQQQTTVTTITTT
TTTTAGQTPAAMSGIAALAAAAAATPKITMNNVSIVPQTAVAAATASNTIRMKNVQPGQQ
IRFAAPGATVLRTASPQQSKQIILQKPGQNIAGQPQIVHLLKAGQGMVVPKVSLIPGKSV
QATGTKPLNQGPTILRLVNPNTVAGSKILTTMKTSNIVAMSKGQNITGKQTIMITKPTGN
SGLVGRTNQFIVVTTGSGLRAVQAVTTSQAGAGQGATSVATPVNVLPLSATNHVTNQQGV
KMIVVSSGAMGGGTAGKPLTITVPGQGGVPKTVTIAAKTGAQTIFNTGKNQLVTVPQIQK
APEAVAVSGKPVTLQMPAGISAKTVTLLPTSSSSIVTTSSASDSIDASKMLFVSSQKQPS
ASLASTSDGPATTDAALAALAAEAGLIDPVQESSGGLSFMVATDDGASGDDKMEDSCNGN
EATTAAALVSQMGAGEPMQVDGDGNFVLPQVDGPIDDLLLEDEEKMDIDEEPAAENATES
SNAESSEVTEQNVDVSENIQTEESAVKEVAEAGEKNEEATTADLPESITTSETEKAEDVD
NSSVDDKAAMEINADDSELPSEKEEMKDSQSVVDDEKVVKSELPLVQSAVEASSEQTSLT
DVVNPITEIDETQQDEDSLVKDIKCESLSENEKSLISENLTEDTDASHQPQDETQKIEIK
DEIEDLESDLPTESSLIKSNEDDEPMITDNSTSIAADNVITPVIIPTIQMKSEPEDEFIK
HEQAILPDLPISPINGVAAPVEKEMEKVRTPMKMELKDDFVISKKENLQKEKQDKINDAR
SETGDDSTALTTLATAALGSAEPTMKIKNEQSEEEKKEAEWYDVGVIKGTSFTVQHYYLS
GDEPLDVTQNLTMDVFKGRTKIAVEPGTAYKFRVAAVNSCGRSAWSEVAAFKTCLPGFPG
APSAIKISKSIDGAQISWEPPSSNVGPILEYSVYLAVRSTALNNDGEPKTVVSNPNQLAF
IRVYCGSSNSCSVNNSALNAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQADPTTAV
KSNSQAKRPASTDLRSQVTSPQKKMKTEPPSDNFS
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgctaaagtggaagcggatcgcgaatccgcccgggccccagccgcga
cccaggcatggccaccgggcggtcgccattaaggatctcatggtcgttttcggcggtggg
aatgagggtatcgtcgacgagctacacgtatacaatacggcaacaaatcagtggtttgtg
ccttcgacgaagggagacattcctccaggttgtgcagcatatggcttcgttgtcgatggc
actcgcatctttgtctttggtggaatggtggagtatggcaaatattccaacgagttgtat
gaactacaagcgagtcgatgggagtggaaacgtttgaagccaaagccacctaagcatgaa
ccaccaccatgtccacgattaggacatagttttacccttattggtaatagggtcttcctt
tttggaggtctggcgaatgacagtgatgacccgaaaaataatataccgagatatttgaat
gatttgtacacgctcgaacttcttcctaatggccatacagcctgggatgtgccgcaaacg
catggacacgcgccacctcctagagaatcccataccggagtggcatataccgatcgtacc
acaggcaagtcttgtctggtgatctatggtggcatgagcggttgccgtttaggtgacttg
tggttcctcgatgttgattcgatgacttggaacaagccagtggttcatggacctacccct
ttaccacggtcactccatactgccactttaatcggtcatcgaatgtatgtatttgggggt
tgggtgccattggtcgtcgacgacgttaaagtcgcgacacacgagaaagagtggaaatgc
acaagcacgctagcatgcttgaatttagaaactctcacttgggaacaactgaccgttgat
tccttggaggagaatgttcctcgtgctcgtgctggtcattgtgcagttggtgtacacagt
agactttatgtatggtctggtagagatggttaccgcaaagcttggaataatcaggtttgt
tgtaaagatctgtggtaccttgaagtcagtaaaccagcggcaccttccagagttcagctg
attagggcttccacgcaatcgttggaagtcagctggacagcaagcccgtccgcgcaatac
tatattcttcaaatacaaaagtatgacatgcctccaatagcggcaactggtagtgcctac
ccgttggtaagcgcaccgacgccgactgcgcctatcgtcagcactcctgttgcggtaaca
acctctgcaatggtagcaactcctactgtacctgtcacatctccgcctgtgactactatt
gccgctcttccatcgactaccccccctgttgctgctgccgtcagagcatccgttgcaaca
gctgtggcaacggcagtagcaactccattacgagttcaaagtgcaagtcctgtgcaaaaa
ccagtaccatcgcaagcagtgcaaaagtcgacaagtcctataaccccgagagtcgcaacc
ggtaacgtcatacgtattcggtctcctctggtcacttcctcagcagcagtggctacagca
gcagtggcagtggttaccactgagcaacaacaaacaactgttactactatcactactacc
actacaactacggctggtcaaacgcccgctgccatgtctggaatcgctgctttggccgca
gccgcagcagccactccaaaaattactatgaacaatgtttcgattgtgccacaaactgca
gttgcggctgcgactgcatccaatactatcagaatgaaaaacgtacaaccggggcagcaa
atacgtttcgctgcacctggcgcgacagtgttgcgcactgcttcaccacagcagagcaag
cagatcatattgcaaaagcccggccaaaatatagccggtcagccacagattgtgcatctt
ttgaaagctggacaaggaatggtggtacctaaagtaagcctcatcccaggcaaaagtgtc
caagcaaccggcacgaaacctcttaatcagggaccgacaatactgcgattggtaaatcct
aatacggttgcgggatcaaaaatcctcacgactatgaaaacgtccaacatagtagcgatg
agcaaaggacagaacattacgggcaagcaaaccataatgatcaccaaaccgacaggaaac
agtggattagtcggcagaaccaaccaatttatcgttgttaccacaggctctggtctaaga
gctgtacaagctgtaacaacatcacaagctggtgcaggacaaggagctacttctgtagct
actcccgtaaatgttttaccattatcagctaccaatcatgtcacgaatcaacaaggtgtc
aaaatgattgttgtttcctctggtgcaatgggtggtggaacggctggaaaacctttaacc
attacagtcccaggacaaggtggtgtaccaaagacagtgactattgctgcaaagaccggt
gcgcaaaccatctttaatactggcaagaatcaactcgttacagtaccacagatacaaaag
gcacctgaagccgtagctgtatctggaaaaccagtgactttacaaatgcctgcgggtata
agcgcaaagacggtgacgcttttaccaacaagtagtagctccatagtaactacttctagc
gcgtcagattcaatagacgctagtaaaatgctatttgtttcatcgcaaaaacaaccatcg
gcttctttagcatctacttctgatggccccgctactaccgatgctgcattagctgcatta
gcggcagaagctggtctgatagatccggttcaggaatcatctggtggtttatcattcatg
gtagccacggatgatggtgccagcggtgatgataaaatggaggatagctgtaatggtaac
gaggcaaccacagcggctgctttagtttctcagatgggtgcaggagaaccaatgcaagtc
gacggtgacggaaattttgtgcttccgcaagtagatggtccgatagacgatctcttacta
gaagatgaagaaaaaatggatatagatgaagaacctgctgcggaaaatgctaccgaatcg
tctaacgctgaatcgtcagaagtaacagaacaaaatgttgatgtatctgaaaatattcaa
acggaagaatcggctgtaaaagaagttgccgaggctggagaaaagaatgaagaagcgaca
acagccgatcttcctgaatcgattactactagtgaaaccgagaaagctgaagatgttgat
aattcatcagtagatgataaagcagctatggaaattaatgctgatgattcagagttacca
agtgaaaaagaagagatgaaggattctcagtcagtagtcgatgatgaaaaagtagtaaaa
tctgaattgcctttagtacaatcagccgttgaggcttcatccgaacagacttctctaacg
gacgttgtgaatccaataacggaaatcgacgaaactcagcaagatgaggatagcttggtg
aaagacattaagtgtgaatcgttgtctgaaaacgaaaaatcgctaatatctgaaaatctt
accgaagacacggatgcatcgcatcaaccccaagacgagactcagaaaattgagataaaa
gacgaaattgaagacctggaatctgatcttccaaccgagagttctcttataaaatcgaac
gaagatgatgaaccgatgattactgataacagtacatcgattgcggcagataatgtaata
actcccgttattataccaaccattcaaatgaaatcagagccggaagatgaatttataaaa
cacgaacaggctatattgcccgatttgcccatttcaccgatcaatggtgtcgctgcacct
gttgagaaagaaatggaaaaagtacgtactcctatgaaaatggagttaaaggatgacttt
gtcatttcaaagaaagaaaatcttcaaaaagagaaacaagataagattaatgatgccaga
tcagaaacaggagatgattcaacagctttgacaacattagctactgctgctttaggatcg
gcagaaccaacgatgaaaataaaaaatgaacagagcgaagaagaaaagaaagaggcagaa
tggtatgatgtgggagtgataaaaggaactagttttactgttcagcattattatctttct
ggtgatgagccattggatgtaacacagaatttgacaatggatgtttttaaaggaagaact
aaaatagcagtagaacctggaactgcctacaagtttagagttgccgctgtgaatagttgt
ggacgaagtgcttggagcgaggtagcagcattcaagacgtgtcttccgggattcccgggc
gcaccgagtgctataaagatatcaaaatccatagacggtgcacaaatttcttgggaacca
ccttctagtaacgttgggcccattctcgaatattccgtctatttggcagtgcgaagtacc
gcgttgaacaatgacggagaaccaaaaacagttgtatcgaatccaaatcagttagctttt
attagagtttattgcggttcgagtaattcttgttcggtgaacaatagtgcccttaatgcc
gctcacgtggacaccactacgaaaccggccataatctttagaatagcagcacgaaacgac
aaaggatacggaccagctactcaagtcaggtggttacaagcagatccaaccactgcagta
aaaagtaattcgcaagcgaagagacccgctagcacagatctacgctcgcaagtgacttct
ccacagaagaaaatgaaaacagaaccacctagtgataatttctcgtga
DBGET
integrated database retrieval system