Trachymyrmex cornetzi: 108761408
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Entry
108761408 CDS
T11212
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108761408
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108761408
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
Pre-60S particles
Helicases
108761408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Transformer
Motif
Other DBs
NCBI-GeneID:
108761408
NCBI-ProteinID:
XP_018363419
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MKTQKWEELNVRLSDSVLETLEQLGFFNMIKVACIPLLLNGKDVAAEAVTGSGKTLAFLI
PLLEMLQKRNEKWKIMEVGAIIVSPTRELAIQISEILEEFLKRIPSLKQVLLVGGVTLQK
DAEKLKKGANIIVATPGRLKDILSNYINLGLYIKSLEFLVLDEADRLLDLGFSATLDIIL
SYLPRLRRTGLFSATQTKELQQLIRAGLRNPALIVVKEKSNVSTPVNLKNSFTIVQPEYK
LPVMIDFIRSVGFKTKYMIFLPTCACVDYFSRVIQTLLPSINVLALHGKMKSKRYKVFDK
FRYAENGILICTDVMARGIDISEIDWVLQYDPPSTASSFVHRCGRTARIGNEGNALLFLL
ETESAYVDFIKRNQKVELRQMERELNEETVDECLQCMRRMQQRDRFMFDKANRAFVSYVQ
AYNKHECNLILQLKDVDLGKLAMGFGLLRMPKMPELKGKNLSSFVGPEIDVNTIPYVHKQ
RELRRIKRLNEYWSTGVWTNNQKRCKQKRAESWSETKKRKLERREKRSKRKERKELKQQQ
FLTISNKKKRKRINEEDVEQLAKDIALIKKFKKKKISQEEFDVAFQV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacagaagtgggaggagttaaatgtgcgactgagtgattctgtattggaaaca
ctcgagcagttgggatttttcaatatgattaaggtagcttgtatacctttattattaaat
ggtaaagatgttgcggcagaagcagttacaggcagtggcaagacactcgcttttcttatt
cctctattggagatgttacaaaaacgaaatgaaaaatggaagattatggaagtgggagcg
ataatagtcagccctacaagagaattggctatacaaattagtgaaattctagaagagttc
ttaaaaagaattccatcgttaaagcaagtattactggttggtggtgtgacgcttcagaaa
gatgcagaaaagttaaagaaaggagcaaatattattgttgccacacctggtagattgaaa
gatatcctgtctaattacatcaatttgggcctatatataaaatctttggaatttcttgta
ttagatgaggcagatagattattagacttgggattctcggcgactttagatattatttta
agctatttgccacgtcttcgaagaacaggattattttctgcaacacagacgaaagagctg
cagcaattgatcagagcgggactaagaaatccagcattaattgttgtgaaagaaaagtct
aatgtttccacgcctgtaaatttaaaaaatagttttacaattgttcaacctgaatataag
ttgccagtaatgatagattttatacgttcagtaggatttaaaacaaagtatatgatattt
ttacctacctgtgcgtgtgtggattatttcagtcgagttatacagacattattaccatcg
ataaacgtacttgccttacacggtaaaatgaaaagtaagagatataaagtgttcgataaa
tttcgatatgctgaaaatggcattttaatatgcacagatgtaatggctcgtggcatcgat
atatcggaaatagactgggtgttacaatacgatcctcccagtacagccagcagtttcgta
cacagatgtggtagaactgcgagaatcggtaatgaaggaaacgcattgctatttcttcta
gaaacagagagtgcatatgtagatttcattaaaagaaaccaaaaagtcgagctgcgtcag
atggaaagagaattaaacgaggagactgttgatgaatgcttacagtgcatgaggcggatg
caacaaagggatcgatttatgtttgataaagccaatcgtgcctttgtttcatacgtgcag
gcatataataaacacgaatgtaatttaattcttcagttaaaagatgtggatttgggaaaa
ttggcgatgggtttcggtcttttgagaatgccaaaaatgccggagctcaaagggaagaat
ttatcgtctttcgttggtcctgaaattgatgtaaacacgataccttatgtacacaaacaa
cgtgaattgcgcagaattaaaagattaaacgagtattggagcactggtgtttggacaaat
aatcagaaaagatgtaaacaaaaacgagcggaatcctggtctgaaaccaaaaagagaaaa
ctcgagagacgagagaaacgaagtaaacggaaggaaaggaaggaattgaaacaacaacaa
tttttaacaatttctaataaaaagaagagaaaacgaataaacgaggaggatgttgaacaa
ttagcgaaagatatagcattaataaaaaaatttaagaaaaagaagatatcgcaagaggaa
tttgacgtggcttttcaagtatga
DBGET
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