Trachymyrmex cornetzi: 108761441
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Entry
108761441 CDS
T11212
Name
(RefSeq) exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108761441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108761441
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108761441
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
108761441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108761441
NCBI-ProteinID:
XP_018363493
UniProt:
A0A195E3P6
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MAETPLSLGEKTFIIHGVDLDFRNDGRSRYQYRPIEIETKLMKHTHGSARLRIGNITDVL
VGVKLEIDTPYAERPEEGKLEFFVDCSANATPAFEGKGGDDLATEISNVLSMAYQTPNAF
DLKQLCIIPHQKCWKMYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVITATLDGGEPD
IQVSDDPYDCIKLDVTNYPVVLTVCKIGDNFVIDPTSEEESCSTASILMSVMPNGKVTSV
VKLGYGSLLPSTLIKMLQTGKDISFKLNEALMKGLEEENKLGQTKPIFGFLR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccctttgagtttgggcgagaagacatttattattcatggagttgatctt
gacttcagaaatgatggtcgatccaggtatcagtatcgccctatcgagatcgaaaccaag
ctgatgaagcatacccatgggtcagcgagattacgtataggcaatattacagatgtatta
gttggcgtaaaacttgaaattgacacaccgtatgctgaaaggccagaggaaggcaaattg
gaatttttcgtagactgttctgctaatgctacaccggcattcgaaggaaaaggtggggac
gatttggcaactgaaattagcaacgtcctttctatggcctatcagacaccaaacgccttc
gatttgaagcagctgtgtataatacctcatcagaaatgttggaaaatgtacgtggacatt
ttgatccttcaatgcggtggaaatctatttgacgctgttggtgctgcggtgaaggcggca
ttgtataatactgaaattccaagggtgatcacagccactctcgatggtggcgaaccagat
attcaggtgtcagacgatccttacgactgtattaaactagacgtcacaaattatccagtg
gtattaacagtatgtaagattggtgacaacttcgtgatagatccaacgtcggaagaagaa
tcttgcagtaccgctagtatccttatgtccgtgatgccgaacggcaaggtgacgtctgta
gtcaagctgggatacggcagcttgttgcctagtaccttgattaagatgttgcagactgga
aaggatatcagtttcaagctaaacgaagctcttatgaaaggactggaagaggaaaacaag
ctcggccaaacgaagcccatatttggatttcttagataa
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