Trachymyrmex cornetzi: 108761730
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Entry
108761730 CDS
T11212
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108761730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108761730
03036 Chromosome and associated proteins [BR:
tcz03036
]
108761730
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
108761730
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
108761730
RSF complex
108761730
WICH complex
108761730
B-WICH complex
108761730
NORC complex
108761730
BRF complex
108761730
NuRF complex (fruit fly)
108761730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
DUF4800
GYD
Motif
Other DBs
NCBI-GeneID:
108761730
NCBI-ProteinID:
XP_018363942
UniProt:
A0A195E2G8
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MSKPDENADTGDTGDNSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMTN
NQKDKAGSPLKVKAGRPRKQPEIPKLDSGDHRHRKTEQEEDEELLAESNASVAPTTRFES
SPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPG
PHIVIVPKSTLANWMNEFKKWCPTLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSYEMV
IKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLLTGTPLQNNLHELWSL
LNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKSEVEKGLKPKKEI
KVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGP
PYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLD
GNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAM
DRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEM
LNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLESLGESSLRNFTVDAPTD
SVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQ
PIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAARIQKEEQRKIDDAQPLT
DEEITEKEKLLLQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVF
WERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNY
TEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITL
IERENQELEERERQERRKKGSNIGTKPTSKRKENLPAPQDKPRKKKK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggatgagaacgcggataccggtgacaccggggacaactcgaatgggtcc
tcggcagaaaccacatcatccaggggcggcgattttgagacgaagcttgagacagaccgt
agcaaacgattcgattacttgctaaaacaaactgagattttctcacactttatgacgaac
aatcagaaggataaggctggtagccctttgaaggttaaagctggtagacccaggaaacag
ccggagatccctaaattagactccggcgatcacaggcatcgtaaaaccgagcaagaggag
gacgaggagttgctggcagagagtaatgctagtgtggcgcctaccacgcgctttgaatca
tcccctcattacatcaaatccggtgagttgcgtgactatcaaatacgcggcttaaattgg
atgatatcgctctatgagcacggcataaatggtattttggctgacgagatgggtcttggt
aagacactgcagactatctctctgctgggatacatgaagcattttcgtaatatccctgga
cctcacattgttattgtaccgaaatcaacgttggctaattggatgaacgagtttaagaag
tggtgtcctactctcagagctgtttgtctgattggagatgcagagactaggaataccttc
ataagagatgtgatgatgcctggagaatgggacgtgtgtgtaacatcttatgagatggtc
attaaggagaaatctgtattcaaaaagttcaactggcgctacatggtgatagatgaggct
cacaggataaaaaacgagaagtctaaattatcagagatcctcagagaattcaagaccacc
aatcgacttcttttgacaggcacaccacttcaaaataatctccatgagctgtggtctctt
ctgaatttccttctaccagatgtattcaatagctctgatgactttgattcatggtttaac
acaaatagctttctaggtgataattctttagtcgagaggttacatgcagttctgagacca
ttccttctgagaagattgaagtccgaggtagaaaagggacttaagcctaagaaagagatt
aaggtgtacattggcttgagtaaaatgcaaagagaatggtataccaaagtattgatgaag
gatatagatatagtaaacggtgcaggaaagatagagaagatgagactgcaaaacattctg
atgcagttacggaagtgctgcaatcatccatacttgtttgatggtgctgaacctggaccg
ccatacactactgacgaacatctcgtctacaactgtggtaaaatggtgatactcgataaa
ttattgccaaaattgcaacagcaagaatctcgagttttgatttttagtcagatgacaaga
atgctagatattctagaagactattgtcattggaggtgcttccaatactgtcgacttgat
ggcaacacggctcatgaagatcgacagcggcagatcaacgagtataacgcgcccggtagc
gaaaagtttatcttcatgctgtcgactcgtgctggtggactgggtattaacttagctacc
gccgacgtggtcatcatttacgattccgattggaatccgcagatggacttgcaggcgatg
gatcgtgcacatcgtataggtcagcagaagcaagttcgagtttttaggtttatcacagag
aacacggtggaggagaagatcgtcgagcgggccgaagtgaagttgcgcttggataagctc
gttatacagcagggacgactagtcgatgccaaacaaacagcattgaacaaggatgagatg
ttaaatatgatcaggcacggtgcaaacgaggtatttgcatccaaggacagcgctattacc
gacgaggatattgacacaatattacagaaaggcgaggccaaaacggaggagatgaagcag
aaactcgagagcctcggagagtcttcgttacgcaattttaccgtcgatgcaccgacagac
tctgtatatcaatttgagggggaagattaccgcgaaaaacagaagatccttggaataggc
aactggattgagccgcccaaacgcgaacgtaaagccaattatgccgtcgacgcttatttc
agagaagcgttacgagtgtcggagccgaaggcgccgaaagcaccaagaccgccgaaacaa
ccgatagtgcaggactttcaattcttcccgccacgacttttcgaactattggatcaagag
atttattatttcagacaaacagtcggctacaaggttccgaagaatcctgaacttggatcg
gacgccgcgcgaattcagaaggaggaacagcgcaaaattgacgacgctcagccgctcacc
gacgaagaaattaccgagaaggagaagttactgcttcagggcttcaccaactggaccaag
cgggacttcaatcagtttatcaaggcgaatgaaaagtatggtcgcgatgacattgagaat
attgcgaaggaggttgaaggaaaaacgccagaggaagttatggagtattcggccgttttc
tgggaacgttgtcacgagctgcaggatatagatcgcgtgatggcgcagatcgagcgcggt
gaggccaagatacagagacgagctggcatcaagaaagcactggacgcgaaaatggctaga
taccgcgcgcctttccaccagctcaggatagcctatggcacgaataagggcaaaaattac
accgaggaggaggatcgatttctcgtttgcatgctacacaaactcggattcgacaaggag
aatgtgtacgaggagcttcgtgccacggtaagatctgccccgcagttccgctttgactgg
ttcgtcaaatcgcgtaccgcgttggagttgcagcgtcgctgcaatactctgataaccctg
atagaacgcgagaatcaggaactcgaggaacgcgagagacaggagaggagaaagaagggc
agcaacataggaacgaaaccgacgtcgaagcgaaaggagaatctgccggcgcctcaggac
aagcctaggaaaaagaagaaataa
DBGET
integrated database retrieval system
