Trachymyrmex cornetzi: 108761868
Help
Entry
108761868 CDS
T11212
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
tcz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108761868
09122 Translation
03013 Nucleocytoplasmic transport
108761868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108761868
03041 Spliceosome [BR:
tcz03041
]
108761868
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108761868
Spliceosome [BR:
tcz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108761868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Per1
ATAD4
ToxA_barrel
Motif
Other DBs
NCBI-GeneID:
108761868
NCBI-ProteinID:
XP_018364131
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MGKENESDSVKKRRKSVSANSGTSMKDGDMYKIIINYEEKEAVERLSEDDSECFLATCND
IRAAMSKIAKLKSSGDSNVKDDIRELQIQTSLAFIELKKLNRMEKFRTKSARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVIKCLQFKSKDELIELVSEEEFYKEAPESISRREITKN
NSHQLRLARLEWELTQRKQLAALCDELTESKKAVASSIETKQTRLDNLAPQLRSILEASK
PLQESLGLPLDKIRQEHQKASLLASPLYVLYAKASAYRDAYDNTLLVKVEGDEDEAKRAN
NHDGLQESDSDPESQLESIVEETLVHKKRHHRLSREARQEEKRSKLLQRHPLHVKILITL
KNETRLTLHFFYMVYLKVVTVESKLETEDLGGISAGDMLVSESVLRELYPRDLGLESPNP
ANQYQLSRHNLGSFSSLGLGIPYRWAQRMAGLHFVSCDMSEQQQKLTSQELAQDCVESVL
KEIKRRIKARLDLCMEIRQLESGNLPIFISTTDPVPQKISTSLHRFTTMTWKSYSNYVAS
PEFYQRGLVLSVDIFYEAVLRRGSSELVARIAIKPDYPKIAPVFSISISPTVPASADIIR
DIEREVNVMWTKSPTLTAQIQRLRACFDIYLETESMAPKEKIFFYPVRGRTRARPYKYLS
LGGEINFKEQPPLFLILLHWSCKEDCSYICTWRTIDYFVSRGLNIPQFHGKWPFIRLFGC
QEPASVLFSILNLCAHWIMYRKFKRRIDQTNPMFYAWTYFNIICLNGWFWSTVFHSRDWP
FTEAMDYSCAFSMVLTLLYCMLLRITNKGTKTFIIITCGYVSILCTHLSHLWSGRINYGY
NMMLNVAIGLATVMITMLWWYFNRIKLPYVYLIAWFNILTIFVTLLELADFPPIFWIFDA
HSLWHASTVPLTVLLYRFVIADCCYLEKYCNKSFLDIDRHRQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaatgaatcggatagtgtgaaaaaaagaagaaaatctgtgagtgcaaac
agcggaacctcaatgaaagacggagatatgtataagataataattaattatgaagagaaa
gaagctgttgagagattgtctgaggatgattctgaatgctttctggcaacttgtaatgat
attcgagcggcgatgagtaaaatagcaaaattaaagtccagtggtgactctaacgtaaaa
gatgatattcgtgagctgcaaattcaaacgtcactggcttttatagaactgaagaaacta
aatcgcatggaaaaattccgtacaaaatctgcacgagactctctagtggctgcaaagagt
agcgttgatagcagacatttgcatttacagaatctattgtatgaagtgatgcatttgaag
aaagaagttatcaaatgtcttcaattcaaatctaaagatgaattgatagaacttgtttca
gaagaagaattttataaagaagctccagaaagtatctcacgacgtgaaataacaaagaat
aattcccatcaactgagactggctcgtttagaatgggaactgacacaacgaaagcaattg
gcagcattgtgcgatgaattgacagagagtaaaaaggcagtagcatccagtattgaaacg
aaacagactcgtttggacaatcttgcgccgcaattgcgctctatattggaagcgagcaaa
ccgttacaagaaagtcttggattgccattggataaaattcgccaggagcatcaaaaagca
tcgttgctcgcatcaccactctatgtgttgtatgcaaaagcgtctgcttacagagatgct
tatgataatacgttgctagtcaaggtggaaggtgacgaggacgaagcaaaacgcgcaaac
aatcatgacggtttacaagagtctgattcggatcctgagagtcagttggaaagtattgtg
gaagaaacactcgtgcataagaaaagacatcacagattatcccgggaagcgaggcaagaa
gagaaacgatctaaactattacaacgtcatccgttacatgtaaaaatacttatcacatta
aaaaatgagacaaggctgactcttcactttttttacatggtatatttaaaagtcgttaca
gtagagtcaaaactcgaaacagaagacttgggaggtattagtgctggagacatgctagta
tccgagtcggttcttcgcgaattgtacccacgggatttagggttggagagtccgaatcct
gccaatcaatatcagttgtcgcggcataacttgggatcattttcgtctttgggactaggc
attccttacagatgggcacaaagaatggctggtctacactttgtctcgtgtgacatgagc
gaacaacaacaaaagctgacgagtcaagaattggcacaagactgtgtggagagtgtgttg
aaagaaattaaacggcgcataaaagcaaggctggatctatgtatggaaatacgacaacta
gagtccggcaacctgccaatatttataagcacgacggatcccgtgccacaaaaaatctca
acgtcgttgcatcgattcacgactatgacctggaaaagttactcaaattatgttgcttca
ccagaattttatcaacggggattagtgttgtctgtagacatcttttacgaagctgtactt
cgtcgcggcagtagcgaactcgtggccaggattgctatcaagccagattaccctaagata
gcaccagtatttagcataagcataagtccaacagtgccagcgtccgccgatatcattaga
gatatcgaaagggaagtcaatgtgatgtggaccaagtccccaacattgacagcgcaaata
caacgactgagagcatgtttcgacatctatctggaaactgagagcatggctccgaaggaa
aagatattcttctatcctgtaagaggacggactcgcgctcggccatacaaatatttatcg
ttgggcggagaaataaattttaaggaacaacctcctttattcttaatcttgctacactgg
tcttgcaaggaagattgtagttacatttgcacatggaggaccattgattacttcgtatct
cgtggtttgaacataccacagtttcatggaaaatggccattcattcgtttgtttgggtgt
caagagcctgcttcagttttattctctatactaaatttgtgtgcacattggataatgtat
cgaaaatttaaaagaaggatagatcaaaccaatcctatgttctacgcttggacatatttc
aatattatatgtttaaacggatggttttggtcaaccgtatttcattcacgggactggcca
tttacagaagctatggactattcttgtgcgtttagtatggtacttacactcttatattgc
atgcttttaaggataacaaacaagggaactaaaacatttattataataacttgtggatat
gtgagcattttgtgtacacatttgtcacatttatggtcaggcagaattaattatggttat
aatatgatgcttaatgtagcgataggattagcgactgtcatgataacaatgctgtggtgg
tattttaaccgcattaagttgccttacgtatacttaatcgcttggttcaatatattaact
attttcgtgactctactcgagttggcagattttcctcctattttttggatatttgatgcc
cattccttgtggcatgctagtactgttcccttgacagtattattatataggtttgtgatc
gcagattgctgttatctggaaaagtattgtaacaaatcatttttagatatcgatcgtcat
aggcagtaa
DBGET
integrated database retrieval system
