Trachymyrmex cornetzi: 108762614
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Entry
108762614 CDS
T11212
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcz03016
]
108762614
Enzymes [BR:
tcz01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
108762614
Transfer RNA biogenesis [BR:
tcz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
108762614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
108762614
NCBI-ProteinID:
XP_018365189
UniProt:
A0A195DZI4
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MDLREPKRKRTKLKSRLPFPILLNETQEWPMYTAHLTDIGSCIIEPEEMSAVHSMGFFGK
GSLSRSYPSFGKARYGAPPVVRNRQWLCRQKWLKEVQELNSTEYKDDKAIAQYEERNIPD
EENIGDIIEIPSNSIENGSKRRNEIDTKNTEIDEVTLDSAEEDDICVIVNRDSIQCDNAE
SSSSTHDDKNSSEDRLDEEDHWKLYNDFKNDCMNEDDNQHGKLLVLPDSDSDTENYLKNI
KPRIENEGFPIREALHLTFEETFFLLFGLGCLQLVHFDGSLLDINSAWLYFCKEKPDFIQ
KYVVYHYYRSKGWVVKPGLKYGGDFLLYKEGPPFYHASYIVIIEVADADSLIVDPTMSSR
SITWNNLFGFERLSETAAKEILFAQVLWPSSVSRDINMTSPEILSEFTVRELLWRRWNPK
QHREDIPIEEEDEDSY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgagaaccaaagaggaaaagaacaaaattaaagtcacgattgccatttccc
attctattgaatgaaacacaagaatggccaatgtataccgcacatctcacagacatagga
tcttgtataattgaacctgaagagatgtcagcagtacattctatgggattttttggtaaa
ggatcgttgtcacgtagttatccatcatttggcaaagcaaggtacggagcaccgccagtt
gttcggaacagacagtggctttgcagacaaaaatggcttaaagaagtccaagaattaaat
tctaccgaatacaaagatgataaagcaattgctcaatatgaagaaagaaatatcccggat
gaagagaacattggcgacatcattgaaattccatcaaattctattgaaaacggaagcaag
cggagaaatgagatagacacaaaaaacacagagatcgatgaagttactttagattccgca
gaggaggacgatatatgtgtcattgttaatagagattcgattcaatgtgataatgctgaa
agctcatcaagcactcacgatgataagaacagctcagaagacagactagacgaggaagat
cactggaaattgtataacgattttaaaaacgattgcatgaacgaggatgacaatcaacat
ggaaaattgttagtattgccagatagcgactcagacaccgagaattatttaaaaaatatt
aaaccaagaatcgagaacgagggttttcctattcgagaggctttgcatctcaccttcgaa
gagacctttttcctcctttttggattaggttgcttgcaactggttcacttcgacggtagt
ctgctagacatcaacagcgcgtggttgtacttttgcaaggagaaaccagattttatacag
aaatatgtagtttaccattattataggagcaaaggttgggttgtcaagcctggcttaaaa
tatggtggtgatttcttgctttacaaagagggaccaccattttatcacgcttcttacatc
gttataatagaagtagcagatgcagactctttaattgtagatcctactatgtcctcgcga
tccataacgtggaataatttgtttggatttgaaagactgtccgaaactgctgctaaggaa
atacttttcgcccaagttttatggccatcgtcagtatctcgagatatcaacatgactagt
cccgaaatactttccgaattcacagtgagagaattactttggcgtagatggaatccgaaa
cagcatcgagaagacattcccatcgaagaagaggacgaggattcgtactaa
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