Trachymyrmex cornetzi: 108762917
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Entry
108762917 CDS
T11212
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108762917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcz03041
]
108762917
Spliceosome [BR:
tcz03041
]
Complex A
Other components
Complex A specific factors
108762917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
AP3D1
Peptidase_S8
DUF4629
Motif
Other DBs
NCBI-GeneID:
108762917
NCBI-ProteinID:
XP_018365678
UniProt:
A0A195DYG3
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MNQSRNFTSLLNPSYLQNAQQQQQQNATSAAAVAAAAAAAAVSAAIANGAQTNMNTATAV
TQNRKREAEGDGKQDKESKDLERKKRKKTRWSGSEHDKTFIPGMPTVLPTNLTPDQERAY
LFQLQIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEERHNL
IQKILKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEKETG
AKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQGVEV
PEGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNILCSSCGG
AGHIARDCRSKRPGQGGPAATGMGGMGQAGDKAKIDEEYMSLMAELGEGPPPDRSKTGQS
RQTPNPNYPGLFDRQQPPRALMAAPAHPPPQMMQSGPMMPPPGMAPPPWSQGNEGMNNMN
MQWQPPVSMPPPPGVMQPPPPPPGSTTQPNIPPLMPWMTGNNQPPPPGQMPPTQIPPPGM
GIPPWQQGQQGPMRPPPPGTAPPPGFPGGWQPQQMGGWPPAAPVPPPPQQQTPAPPGIDL
NTLPTLLAQPPPPPPPTS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatcgcgtaatttcacgtcgctgctaaatccaagctacctacagaacgctcag
cagcaacagcaacagaatgcaacctcggcggcggcagtggccgcggcggctgccgcggct
gcggtgagtgccgcgatcgcgaacggcgctcagacgaacatgaacacggcgaccgccgta
acgcagaaccgcaaacgggaagcagaaggcgatggtaaacaggataaagaatctaaagat
ttagaacgtaagaagaggaaaaagactagatggagtggtagcgaacatgacaaaacattt
ataccaggaatgccgacagtactaccgacaaatctgactcctgatcaggagagggcttat
ctctttcagctgcagattgaggaaatcagcaggaagctacgcactggagatcttggcatc
ccgcttaaccctgaggaaagatccccatctccagagcctatttacagtagcgatggtaaa
cggttgaacacgagagaatatcgtacaagacgtaaattagaagaagaacgtcataatctg
attcagaagatccttaaaatcaatccagagtttaagccaccaccagattataagccacca
ataatacgagttcatgataaagtaatgattcctcaggaagagcatcctgatataaatttc
gttggtttgcttattggaccgcgtggaaatactttaaaatctatggaaaaggaaactggt
gcaaagattataatccgtggaaagggctctgtgaaagaaggaaaagttggtcgaaaagat
ggacagcctttgccaggcgaagacgaaccattgcatgcgtacattaccgcaaacaatcta
gatgctgtgaagaaagctgtggaacgaattcacgaaattattcggcaaggtgtagaagtg
ccggagggtcaaaacgacttgcgacgtaatcaactacgcgaattagctttgttaaatgga
acattacgcgaaaacgacggaccacgttgtaccaattgtggagcttctgatcacaaatct
tggctgtgtcccgataaaccaaatgtgacaaacaacatattgtgttcaagttgtggtggt
gcaggacatattgctcgagattgcagatcaaagagacccggtcagggaggtccagcagcc
actggaatgggaggaatgggtcaagctggagataaggccaaaatagatgaagagtacatg
tcactcatggcagaattgggagaaggcccgccaccggacagatcaaagacgggacaaagt
agacagactcccaatccaaattatcctggactttttgacagacaacagccacctcgcgcg
ttaatggcagctccggctcatcctccaccgcagatgatgcagagcggcccaatgatgcct
ccaccaggcatggcacctccaccgtggagccaaggaaacgaaggaatgaacaacatgaac
atgcaatggcaaccgccagtgagcatgccgccaccgccaggcgtgatgcagccaccacca
ccgccacccggctccactacgcagcccaacattccgccgttaatgccgtggatgacaggt
aacaatcaaccaccgccaccgggccaaatgccgcctacacagattcctccgcccggaatg
ggtataccgccgtggcagcagggtcaacagggaccgatgcgaccgccgccgcctggcacg
gcaccgcctccgggattccccggtggctggcaaccacaacagatgggtggctggccacca
gctgcgcctgttccacctccgcctcaacaacagacccctgcgccacccgggattgacctg
aatacgttgccgacgttactggcacaaccacctccgccgcctccgcccaccagttag
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