Trachymyrmex cornetzi: 108762981
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Entry
108762981 CDS
T11212
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108762981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108762981
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108762981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF12
Svf1_C
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
108762981
NCBI-ProteinID:
XP_018365764
UniProt:
A0A195ENW1
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MTSFKKINTKVFARTGPELTEDNIYWKKYAPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSKFKEAAYGGCFRRDGKLLCVGGEEAVIKLFNISSNSVLRIFSG
HKAAVHRVFFTADDVHVASFSDDKTVALWDIPSEKQLTSFNEHTDYVRAGAVSPVSSDVL
LSGGYDKIVNMYDARTNKKVFSVNHNAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
VAKITQHHKTVTCLKIASNGHRILSGSLDRHVKVYDAGTYKTLHALDYPNAVLSIGISVD
DETVVAGMVDGMISVRRREEDVKDVIKPKRKKVSYRHAGENLHVRSIDVVVHQEVKEVMS
KHDACLRKFQYSKALDCVMMNYVVNKTPHVTVALTQELIRREGLRRALAGRDGKSLVNII
KFLNKYIGSIRFGRVLSHVANVLLDVYEDHLDELSEETRKTFAILSQKLQEEEQLILALT
QLQGSMQMILSGAETSSLPAIKEIQSLEPSNAAQTERDIILNIA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtttaagaaaataaataccaaagtgtttgcccgaacaggaccggaattaact
gaagataatatatattggaaaaaatatgcgcctccagttttaataaaagaatttggtccg
atagactacattgacttctcgccagtagagccacattatttcgcaacaacctgctcagta
cgagtacaactgtataatcctatcacaaagttagctacaaaaacttacagcaagttcaaa
gaagctgcatatggaggttgctttcgtagagatggcaagctgttgtgtgtcggtggagaa
gaagcagtgattaaactctttaatatcagttcaaatagcgtgttgcgaatcttttctgga
cacaaggctgcagtgcacagagttttcttcacagcagatgacgttcacgttgcttcattt
tcagacgataagactgtagctttgtgggacatacctagtgagaaacaattgacaagtttc
aatgaacatacagattatgtcagagctggcgcagtgagtcctgtatcctctgatgtgtta
ttatccggcgggtatgacaaaattgtgaatatgtatgatgccagaacgaataagaaggta
tttagtgttaatcataacgcaccagtagaaagtttactcttcttgccgactggaggaata
tttctgtcagcaggtgggacagatattaaagtatgggatgctctcgcgggtggaaaattg
gtcgcgaaaattactcaacatcataaaactgtaacttgcctgaaaattgcttctaatggt
catagaatactgtctggttcgttggacaggcatgttaaggtttacgatgctggaacatat
aaaactcttcatgctttggattatcctaatgcggttctcagcataggaattagtgtagac
gatgaaaccgtcgtagctggtatggtagatggtatgatttctgttagaagacgcgaggaa
gacgtgaaagatgtaataaaaccgaaacggaagaaggtgtcgtacaggcatgcaggagaa
aatctgcatgtacgaagtattgacgtagtcgtgcaccaagaagtgaaagaggtaatgagc
aagcacgatgcctgcttgcgaaagtttcaatatagtaaagcgctcgattgtgtcatgatg
aattatgtggttaataaaacgccacatgtcactgtagcgcttacacaggaacttattagg
cgcgaaggtttaaggcgagctttggccggtagagacggcaagtcgctagtaaacattatt
aaattcttaaacaagtacatcggcagtatacgttttggaagagtattgtcgcacgtagca
aacgtgttgttagacgtttacgaagatcatttggacgaactgtcggaggaaacacgaaaa
acgtttgctatactgtcgcaaaaattgcaggaggaagaacagttaattttagctttaacg
caattgcaaggttcaatgcaaatgatattgtctggtgctgaaacgtcttctttacctgct
ataaaagaaattcaaagcttggaaccatcaaatgccgctcaaacagaacgtgatattatt
ttgaatatagcttaa
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