Trachymyrmex cornetzi: 108763005
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Entry
108763005 CDS
T11212
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03013
Nucleocytoplasmic transport
tcz03015
mRNA surveillance pathway
tcz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108763005
09122 Translation
03013 Nucleocytoplasmic transport
108763005
03015 mRNA surveillance pathway
108763005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108763005
03041 Spliceosome [BR:
tcz03041
]
108763005
03009 Ribosome biogenesis [BR:
tcz03009
]
108763005
03012 Translation factors [BR:
tcz03012
]
108763005
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108763005
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108763005
mRNA cycle factors
Stress granule specific factors
108763005
Spliceosome [BR:
tcz03041
]
Complex C
Other components
EJC/TREX
108763005
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
Helicases
108763005
Translation factors [BR:
tcz03012
]
Eukaryotic type
Initiation factors
eIF-4
108763005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108763005
NCBI-ProteinID:
XP_018365792
UniProt:
A0A151J4R6
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAEKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagtcacgtcgtgtagcgcaaacggaagatttatcgaacgttgagttcgaa
accagcgaagatgtcgaggttattcctaccttcgacaacatgggtctccgtgacgaattg
ttacgcggaatctatgcgtacggttttgaaaaaccatcagctattcagcaacgatctatt
aaacctattatgaaaggcagagatgttatcgctcaagctcaatctggtacaggaaaaact
gctaccttctcaattgcgatattacagtcactggatacacaagtacgagaaactcaagtt
ttggttttgtctccaactcgagaacttgccactcaaatccagaaagttatccttgcattg
ggagattttatgaatgtacaatgtcatgcttgcattggtggtacaaatcttggagaagac
atcagaaaactcgattatggccagcatgttgtatctggtacacctggtagagtattcgat
atgattaaaaggcgagtactcagaaccagagctatcaaaatgctggtacttgacgaatct
gatgaaatgttaaacaaaggtttcaaggaacaaatatatgatgtgtatcgatatctccca
ccagcaacacaagttgttttggtttcggccactttaccgcatgaaattcttgaaatgact
agcaaatttatgacagatcctatccgtatccttgtcaaacgtgatgaattgacattggaa
ggaatcaagcaattcttcgttgctgtggaacgagaagagtggaaatttgacacgctctgt
gatttatacgacacgttaacaataacacaagcggttatcttttgtaatactaaacgtaaa
gtagactggttgacggaaaaaatgcgagaagctaattttacggtatgctccatgcatgga
gatatgccacagaaagaacgagataacataatgaaagagtttcgatctggtcagagccgt
gtgttaattacaaccgatgtatgggcaagaggaatcgatgttcagcaggtgtcactcgta
attaactatgatttgcctaacaatcgtgaattgtatattcatagaataggtcgatcagga
cgttttggacgcaaaggtgtgtctataaactttgtaaaaactgatgacatcagaattctt
cgagatatcgaacaatattattctacacaaatagacgaaatgccgatgaatgtggctgat
ctaatataa
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