Trachymyrmex cornetzi: 108763271
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Entry
108763271 CDS
T11212
Name
(RefSeq) neurogenic locus Notch protein isoform X1
KO
K02599
Notch 1
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04320
Dorso-ventral axis formation
tcz04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108763271
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108763271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_3
Notch
NOD
Ank_4
Ank_5
Ank_3
NODP
EGF_2
EGF_DL_JAG
Presenilin
Motif
Other DBs
NCBI-GeneID:
108763271
NCBI-ProteinID:
XP_018366249
LinkDB
All DBs
Position
Unknown
AA seq
2489 aa
AA seq
DB search
MSLPRPRLDYALTVGPLLLALLAFTMFHHCVPTVSGFVSCSPSPCKNGGLCVSSPRDESH
CNCTSKYVGEYCQHLNPCYTGSRCQNGGSCRVREGIGGGTPSFTCSCPVGFTASLCEIPI
ENACDSSPCLNGATCNLKSLHEYVCTCSIGFTGDHCERQDYCASSPCRNGAECRSLEDSY
ECTCAPGFTGPNCADDIDECERDPCRHGTCNNIHGSYRCMCSSGYTGQNCESDYIPCDPS
PCENGGSCHQLGEHDYECICSEGFRGDHCEENIDDCPGNLCQNGATCMDRVNEYSCLCPP
AFTGTQCELDVDECSVRPSLCHNGATCTNSHGSYSCICVNGWTGPDCSVNIDDCAGAACF
NGATCIDRVGSFYCQCTYGKTGLLCHLDDACTSNPCHEGAICDTSPINGSFACSCATGYK
GLDCSEDIDECTQGSPCEHDGICVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGS
CLDDPGTFRCVCMPGFTGTQCEIDIDECAIRPCMNGGTCSDLINAFKCTCAEGFTGTHCQ
INIDDCISSPCKNGGTCQDGIARYTCECPAGFTGDSCETNINDCASNPCRSGICIDGENS
FTCNCSPGFTGNLCQTQINECESNPCQFGGRCEDRIDGYLCVCRPGTSGENCEVNVNECY
SNPCRNGARCIDGINRYSCECEPGFTGQHCETDINECASNPCANGGLCVDLINGFKCDCP
RGYYDARCLSDVDECASSPCLNGGTCEDGVSQFICHCLPGYGGKRCEADIDECGSNPCQH
GGTCNDHLNGYSCKCLPGYAGTNCETNIDDCANNPCQNGGSCIDLVNDYKCVCELPHTGR
NCEDKLDPCSPNKCLHGAKCSPSSNFLDFACTCTVGYTGRLCDEDVNECVMTSPCRNGAT
CRNTNGSYHCQCAKGYEGRDCIINTDDCASFPCQNGGTCLDGVGDYTCLCVDGFSGKHCE
VDIDECLSQPCQNGAICKEYVNSYTCQCQLGFSGINCQTNDEDCTDSSCMNGGTCIDGIN
NYTCVCKTGYTGSNCQYRINECDSSPCQNGATCHDHIQYYTCHCPYGYTGKQCDKFVDWC
AENPCENQATCVQHMNKYHCNCSPGWTGKVCDVEMVSCKDAAIRKGVPENSLCNNGTCEN
IGNSHRCHCLDGYTGSYCQEEIDECDSAPCQNGATCKDLIGSYQCQCTKGFQGQNCELNI
DDCRPNPCQNGGTCHDLINNFTCSCPPGTLGFICEVNIDDCTMTACHNNGTCTDKVGGFE
CKCPPGFVGPRCEGDINECLSNPCTSPGTQDCVQLVNNYHCNCKQGYMGRHCEVKMNFCD
SSPCQNGGFCIAKHDRHVCMCNNAYHGTNCEFTGSYCDSEPCQNGGTCRIIGNNYKCYCL
PGTTGMHCEFDAWNECDRHPCQQNAPCINKIGDYACDCPPTWTGKNCDTYDSNYPGGIFG
NTPKNMSDINLERERQKCAENDCKAKYNNGRCDEECNRLACEFDGNDCSLGVNPWRNCTA
PVDCWKLFMNGVCDEVCNNPQCLYDGRDCGPKLPPCNPIYDAYCRKHYANGHCDYGCNNE
ECDWDGLDCDKEPPSLAEGVISIAVRMDVDSFRTNIATFLRDLGHYLRTTLRVKTDELGN
EMIYPWKPEKNKLLNIYTRLTTPSNRKGAVTFLEIDNRKCTLAQGTSCFSSANEAAEYLA
AAALKQPLSLNFPIEQVRSIVGTQNTDYSDNPTNYKYVFIGVVIVVLGGLLVGVLVTAQR
KRAVGVTWFPEGFLRTSSGSGQRRRSRRRGPDGQEMRNLNKQPSVNCMSMDVVSARIQSQ
WSDDESDLPPSKRMRAIEPGYASDHTVITDYEETEPRMWTQQHLDAAEIRRPDAGGVLTP
PSLEHGQDVDARGPCGMTPLMVAAVRGGGLDTGEEEDESDGTAAVIADLVAQGADLNATT
DKSGETSLHLAARYARADAAKRLLDAGADANSQDNTGRTPLHSAVAADAMGVFQILLRNR
ATNLNARMHDGTTPLILAARLATEGMVEDLINADADINAADNSGKTALHWAAAVNNVDAV
NILLVHGANRDAQDDKDETPLFLAAREGSFEACKALLDTFANREITDHMDRLPRDVASER
LHHDIVRLLDEHMPRSPQMVTVIPNGPLMGSANHPQLITHPTVIGSAPKQTKSKKRPKAG
TGNPNSPESEGGAVVMVRRKPSVKKPPAKPRGAQPPNQEIPQGAEGADGNLPTSPYDSAS
LYSNALPLVAHTATAKQPPPYEDCIKSQSMQGLQQLGLDTFTSNYGLPFHDQLLAPHQRQ
QQGMVNTLSPPYSNQSPPHSVQSNMTLSPQASYMGSPSPAKNRPSLPTSPTHIAAMRQAT
HQKHGSMPPVGFDFENLPYSSSQQQQQQQQMQQTQQQIQQQQQQQQQQPQPQQSTQQQQQ
QQQQQQQQTQQYYQYLTPPSHHSGPDVTPQHLMQAPESFPTPSPDSPGHWSSSSPRSNSD
WSDCMASPTNAYGAGGAHQSNKGSEAIYI
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccacggccaagattggattacgcgctcacggtcggaccgttattgctcgcg
ttgctggcgttcaccatgtttcatcactgcgtgcccacggtatccggttttgtgtcgtgt
tcgccgagtccttgcaaaaacggaggactctgcgtgtcatcgccgcgcgacgaatcgcat
tgcaactgcacatcaaaatacgtgggcgaatactgtcaacatttgaacccatgttatacg
gggtcgcgttgtcaaaacggcggctcatgcagggtacgcgagggcattgggggtggtaca
ccatccttcacatgttcgtgtccagtcggttttactgccagcctctgcgaaattcctatc
gagaatgcctgtgactcttcgccctgcctcaacggtgctacgtgcaatcttaaatcgttg
cacgaatatgtgtgcacgtgcagcatcggattcacaggtgaccattgcgagcgacaggat
tactgcgcctcgtcgccttgtcgaaacggggccgagtgtcgctcgctcgaggacagctac
gagtgcacgtgtgcacccggcttcacgggtccaaattgtgcagacgacatcgacgagtgt
gagagggatccgtgcagacatggtacctgcaacaatattcacggatcttacagatgtatg
tgctcgagcggatacaccgggcaaaactgcgagagcgactacatcccctgtgatccgtca
ccgtgtgaaaacggaggctcgtgccatcagcttggcgaacatgactacgaatgcatttgc
tccgaagggttccgaggcgatcactgcgaggagaatattgatgactgtccgggcaatctc
tgtcaaaatggtgccacctgcatggaccgagtgaacgagtattcttgtttgtgtccaccg
gcctttacgggcacgcaatgtgaactggatgtggatgagtgctcggtacggccgtccttg
tgccacaacggggccacatgcacgaattcgcacggtagttattcgtgtatatgcgtgaat
ggctggaccggacccgattgcagcgtcaacatcgatgactgtgcaggcgcagcctgcttc
aacggcgcaacttgcatcgatcgcgtcggcagtttctattgccaatgcacatatggaaag
accgggctgctttgtcatctcgatgatgcctgtacatcgaatccgtgtcatgagggcgcg
atctgtgacactagtcctatcaacggatccttcgcttgctcttgcgccaccggatacaaa
ggattggactgctccgaggacattgatgagtgcacacaaggttctccttgcgagcacgat
ggtatttgcgtgaacacgcccggatccttcgcctgcaattgcacgcaaggattcacgggt
ccgcgatgcgagacgaatgtgaacgagtgcgagtcgcatccatgtcagaatgacggttcc
tgcctggacgatcctgggacctttcgatgcgtctgcatgcctggcttcactggaactcaa
tgcgagatcgacatagacgaatgtgcgataaggccgtgcatgaacggtggtacctgtagt
gatctcatcaacgccttcaagtgcacctgcgccgagggtttcaccggcacccactgccag
atcaacatcgatgattgcatctcgtcaccatgcaaaaacggtggtacttgtcaggatggt
atcgcgaggtacacatgcgaatgtccggccggtttcactggcgactcctgtgagaccaac
atcaatgactgcgcctcgaatccatgtcgcagcggtatctgcatcgacggcgagaacagc
ttcacctgcaactgctcccctggtttcaccggtaatctgtgccagacgcaaatcaacgaa
tgcgaaagcaatccgtgtcagtttggcggtagatgcgaggatcgtatcgacggttaccta
tgcgtctgtcgacctggcacatctggtgagaattgtgaggtcaacgtcaacgaatgctac
agcaatccttgtcgaaacggagccagatgtatcgacggtatcaacaggtactcctgcgaa
tgcgaacccggtttcaccggccaacactgcgaaaccgacataaatgagtgcgcaagtaat
ccatgtgcgaacggtggcctttgcgttgacttgataaacggcttcaaatgcgattgccca
cgtggttactacgacgccaggtgtctgagcgacgtggacgagtgcgcgagctcgccctgc
ctaaacggtggtacttgcgaagacggggtgagccagtttatctgccattgcctgcccggt
tacggcggcaagaggtgcgaggcggacatcgacgagtgtggctcaaacccctgccagcac
ggtggcacgtgcaacgaccatctgaacggctacagctgcaagtgcctgcctggctatgcc
ggcaccaattgcgagaccaacatcgacgactgtgccaacaacccctgccagaatggtgga
tcttgcatcgatctcgttaacgattacaaatgcgtctgcgagctgccccacaccggcagg
aattgcgaggacaagctggatccctgctcgccgaacaaatgtcttcacggggcaaaatgc
tcgccatcatcgaacttcctcgattttgcgtgcacatgtacggtcggttacacgggcagg
ctatgcgacgaagacgtgaacgagtgcgtgatgacgtcgccgtgcagaaacggtgccact
tgccggaacaccaacggctcttaccattgccagtgcgcgaaaggctacgagggccgtgat
tgcatcatcaataccgatgactgtgcatcatttccttgtcagaatggcggcacctgtcta
gacggcgtcggtgattacacgtgcctctgcgtcgacggtttcagtggcaaacactgtgaa
gttgacatcgacgaatgcctgtcgcaaccctgtcaaaacggtgccatttgcaaggaatat
gttaattcctacacgtgtcaatgtcaacttggcttctctggcattaattgccaaaccaat
gacgaagactgtacggacagtagttgcatgaacggtggaacgtgtattgacggtattaac
aactatacatgcgtctgcaagactggctacacaggctcgaactgccaatatcggatcaat
gaatgtgatagctcaccctgtcaaaacggtgctacttgtcatgatcatatacagtactac
acatgccactgtccgtatggttacacgggtaagcaatgcgataaattcgtagactggtgc
gctgaaaatccatgcgagaaccaggcaacgtgcgtgcaacacatgaacaagtatcattgc
aattgctcgcccggatggactggcaaggtatgcgacgtagagatggtttcgtgcaaagac
gccgccatacggaaaggcgtaccagagaacagtctttgcaacaatggcacttgcgaaaac
ataggcaatagtcatcgttgtcactgcctcgatggttacactggctcctactgtcaggaa
gagatagacgagtgtgactcggcgccatgtcagaatggcgcaacctgcaaggacctcatt
ggctcgtaccagtgtcagtgcaccaagggtttccaaggtcagaattgcgaactcaacatt
gacgactgccgaccaaatccttgtcagaacggtggtacttgtcatgatctaatcaacaac
tttacatgttcctgtccacccggtactcttggttttatatgcgaagttaacattgatgac
tgcacgatgaccgcttgccacaataatggtacctgtactgacaaagtgggtggcttcgaa
tgcaaatgtccgcctggtttcgtcggaccaagatgcgaaggcgatattaatgagtgtttg
tcgaatccgtgtacctcgcccggtacacaggactgcgtacaattagtcaacaattatcac
tgcaactgcaaacagggttatatgggccgtcactgcgaggtcaaaatgaatttttgtgat
agttctccatgtcagaatggtggcttttgcatagccaaacacgatagacacgtttgcatg
tgtaataatgcttatcacggcaccaattgcgaattcaccggttcctactgcgactccgaa
ccatgtcaaaacggcggcacgtgtcgtatcatcggaaataattacaaatgttactgcttg
ccaggtacaaccggtatgcattgtgaattcgacgcttggaatgaatgtgataggcaccca
tgtcagcaaaatgccccttgcataaataaaattggtgactacgcttgtgattgtcctcca
acatggactggcaagaattgcgatacatacgattcaaattatcctggtggaatattcggc
aatacacccaaaaacatgagtgatattaatttagaacgcgaacgtcagaaatgtgccgaa
aacgactgtaaggctaagtacaataatggacgctgtgacgaggaatgtaatcgattggct
tgtgagtttgacggtaacgattgctcactgggcgttaatccatggcgcaactgtaccgcg
cccgtggattgctggaagttattcatgaacggcgtgtgcgacgaagtctgcaacaatccg
caatgcctgtacgacggcagagattgtggtccgaaacttcccccttgcaacccgatctat
gacgcgtactgcagaaagcattatgctaacggccattgcgattatggctgcaacaacgaa
gaatgtgactgggatggtctcgattgtgataaggagccgccgtcattggcagaaggcgtc
atatccatagctgtgagaatggatgtggatagttttcgaactaacatcgcaaccttctta
cgtgacctcggccattatctaagaacaacgcttcgcgttaaaacggacgaactcggcaat
gaaatgatatatccttggaagcccgaaaaaaataagttgcttaacatctatactcgactg
acgaccccttccaatagaaaaggtgctgtgacttttctagagatcgacaatcgcaaatgt
actctagctcagggcacatcatgtttttcatcagcgaacgaggcggccgagtatttggct
gctgcggcgttgaagcaaccgctatcgctaaactttcccatcgaacaagtgcgtagtatc
gtaggtactcagaatacggattattcggataacccaacgaattataaatatgttttcatc
ggtgtggtcatcgtggtgctcggtggattattagtgggcgtcctggtcactgcacagcgg
aagcgtgctgttggggttacatggttcccagagggcttcttaaggaccagtagcggcagt
ggccagcgacgccgatcacgtcggcgcggtccggacggtcaggaaatgcgtaacttgaat
aaacaaccgtcagtgaactgcatgagcatggatgttgtaagcgctcgaatacaatctcaa
tggtctgacgacgagtctgatctgcctccatcgaaacggatgcgtgccatcgagccaggt
tacgcaagtgatcataccgtcatcacagattacgaggagaccgagccgcgtatgtggaca
cagcaacatctggacgcggctgagatacgacggccggacgcgggcggtgtattgacaccg
cccagcctcgagcatggtcaggatgtggacgcgcgtgggccatgtggcatgacaccactg
atggtagcggcggtacgtggtggcggactcgacactggcgaggaagaggatgagagtgac
ggaaccgcggcggtaatcgctgatctcgttgcccaaggcgcggatctaaatgctaccaca
gacaagagcggtgagacgtcgctacatctggccgcgcgttacgcccgggccgatgcggcc
aagaggttgctggacgcgggcgccgatgctaattcacaagataacaccggtcgtacaccg
ctgcactctgctgtcgcggctgacgctatgggagttttccagattctgctacgcaatcga
gcgacaaatttgaacgcgcgaatgcacgatggtaccacgccactaatactagcagcgcgt
ttagctactgaaggaatggtggaagatctcattaacgctgatgccgacatcaatgcagcc
gataatagcggcaagactgcgctacactgggccgcagcagtcaacaacgtcgacgctgta
aacatattgctagtgcatggtgcaaacagagacgctcaagatgataaagatgaaacccca
ttattcttagcggctcgtgagggcagctttgaagcatgcaaagcattgctagacacgttt
gctaacagggaaatcaccgatcacatggatcggttacctcgcgatgtcgcaagcgagaga
ttgcatcatgacattgtcagattacttgatgagcatatgccaaggtcgccgcagatggtt
acagtcattccgaatggtcctctcatgggatctgcaaatcatccacaattaatcacgcat
cccacagtaatcggctcggcgccgaagcaaaccaagtcaaagaagcggccaaaagcaggt
acgggaaacccaaacagtccagagtcagagggcggcgcggtagtgatggtaaggcgaaaa
ccatcggtgaagaaaccgcccgctaaaccgcgcggtgctcaacccccaaaccaagagatt
ccacagggagcagaaggtgccgatggcaatttaccgactagcccgtatgatagcgcgagc
ctttacagtaacgccttacccttggtggctcacactgcgacagcgaaacagccgccaccg
tatgaggattgcatcaaaagccaatcgatgcaaggtttgcaacaactcggcttagatacc
ttcaccagcaactacgggctgccatttcacgaccaactcttagcgccgcatcagcggcag
caacaaggcatggtaaacacattgtcgccgccgtatagtaatcaatcgccaccgcactcg
gtgcagtccaacatgactctttccccgcaagcaagctacatgggttcgccgtcgccggcg
aaaaatagaccgtcgttgcccacttcgccaactcatatcgctgccatgcggcaggcgacg
catcagaaacatggcagcatgccaccagtgggctttgacttcgagaatttaccgtattcc
tcgagccaacagcaacaacaacaacagcaaatgcaacaaacgcagcaacagatccaacag
cagcagcagcagcagcaacaacagccgcagccgcagcagagcacgcaacagcagcaacag
cagcagcaacagcagcaacaacaaacgcaacaatactatcagtacttgacgccgccgtcc
catcattccggacccgatgttacgccacagcatctcatgcaagcgcccgagagttttccg
acgccatcgccggatagccctggtcattggtcttcgagctcgccccgatcgaacagcgac
tggtcggattgcatggcctcgcctacgaacgcctacggtgccggcggcgctcaccaaagc
aacaaaggttctgaagcgatctacatatga
DBGET
integrated database retrieval system
