Trachymyrmex cornetzi: 108763298 Help Entry 108763298         CDS       T11212                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism tcz  Trachymyrmex cornetzi Pathway tcz04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:tcz00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108763298  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tcz00536]     108763298 Glycosaminoglycan binding proteins [BR:tcz00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108763298 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  108763298 NCBI-ProteinID:  XP_018366299 LinkDB All DBs Position Unknown AA seq 1510 aa AA seqDB search MRRRALELITGLLVVQLLLPLPDQVNAMKNRLRKQRSKPQEHQAQQSSNDYEYDYNYENY DEYDEKNETTTILPSRAIPSDITQLSERSEITTEAFLRRETPTDLPTPTTTQFYDHGRSE ETSSTSARDHSVLPTEILPGESNIYSSVAVPGPRGSPGRPGDDGRPGDSGYPGQPGTPGI PGPPGPPGSIPDVSLYYQQLALSQANEDKGPSGAAASLYGPEALSYIQAQVGPMGPRGPP GPSGPPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPQGSPGPV GQRGLPGIPGFPGLKGHRGFPGLDGAKGEQGTPGEKGSMGSPGPMGPVGQMGPAGPRGER GREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGPQGSTGNQGLQGPR GESGRPGQPGETGPQGPQGKDGIPGEKGATGALGPVGVVGFPGARGQPGTPGNPGIPGAK GAPGLPGDRGLKGDTGVKGDAGMPGPRGLPGPPGNEGKRGKRGMRGPIGSVGPPGERGAS GERGFPGSDGSIGPQGQPGDRGPPGAVGSKGATGDPGRPGPAGLQGARGLMGRPGASGKP GNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPGERGYSGERGKDGEPGNPGPPGPRGDT GKEGPLGVQGPPGPSGSDGARGLPGPTGSIGFQGLPGAAGNPGVPGKDGEAGVQGHPGPP GMVGDRGERGLPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGPKGDKGSFGSPGLLGLP GARGLPGESGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLI GEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLAGSRGEI GAPGPIGITGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPPGASGLPGIKGDA GDTGRPGNPGPIGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLPGLLGSPGPI GNRGLRGAPGEIGQPGKTGAEGPPGPPGLIGSPGAPGHTGEIGPEGPTGKPGPPGIGGRP GDKGPPGVPGAVGPSGPSGLPGPPGPTGPTGLIGERGPKGETGPQGVEGPQGPRGKPGPA GLEGIKGDRGEEGQKGAKGHRGFTGLQGLPGSPGLVGEKGIPGLPGLPGKDGEPGIRGNP GREGNPGPIGPVGNPGSRGPSGEEGRQGSPGLPGPPGPPGPPGEVGFGYDAASLAAFIGQ GQTKGPDPLGDEPPRIFSKDITEKERRELLLKAYENLKSSFQKLMKPDGEKNSPAKTCRD LFVAYPDKLSGEYWIDPNEGDIRDAILVYCDAEKRATCILPNPSRSPEIIHITDQQETWL SEIDNGMKITYKADSNQIGFLQLLSKHANQNITYHCKNSVAYFDYEKKTYKRGLKLLAWN DVELTPRGNQRLRYEMIMDECRVYRNNWGKTVVSYETDKPVRLPILDVALRDIGKPEQSF SIEIGPTCYD NT seq 4533 nt NT seq  +upstreamnt  +downstreamnt atgagacggcgggctttagagctgatcacgggacttctcgtggttcagctgctgttgcct ttgccggatcaagtgaacgccatgaaaaacagactgagaaaacaacgatccaaaccgcaa gagcatcaggctcagcagtctagcaacgattatgaatatgattataactacgagaactac gacgaatacgatgaaaagaacgaaactacaacaatattaccatcacgagcaataccatca gatatcacgcaactttcggagagatccgaaataacaacagaagcatttttgaggcgagaa acacctacagatttaccaactcctacgacaactcaattttatgatcatggtagatcagag gagactagttccacatctgctcgggatcattcagttttacctacggagattttaccgggt gaaagtaacatatatagttctgtggctgtaccaggaccacgaggttcacctggtcgaccc ggagatgacggtcgtcctggcgattcaggatatcctggacaacctggtacacctgggatc ccaggaccacctggaccaccaggatctatacctgatgtatctctttattatcaacaattg gctttatctcaagcaaatgaagataaaggtccgtccggtgcagcggcgtcattgtatgga ccagaggcattatcttacattcaggcacaagtaggcccgatgggtccgcgaggtcctcca ggtccatctggtcctcctggtcctcaaggttttcaaggtacacgaggtgaaactggtgaa ctgggttctccaggccctcctggcatgccaggtcctaggggtttaccaggattgcctgga aaagacggtatcagtggagaggatggcgaaactggtccacaaggatcgcctggtcctgtg ggacaacgtggccttccaggaatacctgggtttccaggactgaaaggtcaccgtggtttt ccaggtctagacggtgccaaaggtgaacaaggaactcctggtgaaaaaggatctatgggc tcgcctgggccgatgggaccagtaggacagatgggtccagctggacctcgcggtgaaaga ggtagagaaggtccgtcgggccctcctgggttgagaggtctcgacggaattgctgggccg cctgggcaacccggtgttataggcaaacctggttcaccaggttttccaggtaatcctgga gttaagggtgaccaaggaccgcaaggatcaacaggaaaccagggtttgcaaggcccgcga ggtgaaagtggccgtccaggacaacctggtgaaactggtccacaaggtcctcaaggcaaa gatggaattccgggtgagaaaggagccactggagcactaggacccgttggtgtggtcggg tttccgggtgctcgaggtcaacctggaacaccgggtaatcctggtattcctggcgccaaa ggagcacctggccttcctggtgatagaggtttgaaaggagatactggagtgaaaggtgat gcaggaatgcctggtccgcgtggacttccgggacctcctgggaatgagggtaaaagaggc aaaagaggtatgcgtgggccaatcggctctgtaggacctcctggagaacgcggcgcatct ggagaacgtggttttcctggatcggatggttctatcgggcctcaagggcaacctggtgat cgtggtcctccaggagctgttggatcaaaaggcgctactggagatcctggacgacccgga ccggcaggattacagggtgcacgtggtttaatgggtaggcccggagcctccgggaaacca ggtaatcctggggaacgtggaattcaaggtgcggatggcaagcctggagaacagggactg cctggattgcagggtctaccaggaccaataggaacaccaggggaaagaggatattctgga gaacgtggaaaagatggtgagcctggtaatccaggtccgcctggtccaagaggagatact ggtaaagaaggacctctaggagtacagggtccaccaggtccatcaggaagcgatggtgcg cgaggtcttccggggcccactggctctataggttttcaaggtcttccaggtgccgccggt aatccgggtgttccaggcaaggacggagaggcaggagtacaaggacatcccggtccgccg ggaatggtcggtgatagaggcgagcgaggacttccgggagaaagaggacttattggacct ccaggacctatgggacctagaggagaaaccggaacacaaggctctgacggtctcattggt ttaccaggacccaaaggagacaaaggaagtttcggttcaccaggattattaggacttcct ggcgcgagaggattacccggagaatctggacagaaaggagaaaggggcacaatcggacca atcggccccgaaggtccctcaggacatattggagagcgtggtccacaaggagaagttgga cctcctggctctcctggagaaccagctgaacgaggtgatccaggtcctcctggtctcatt ggcgagcccggagctcctggtaatccaggagaaagaggacctcatggattacagggctcg caaggttttccaggcccacaagggttaatcggacttccgggtctgaaaggtgatcgtgga tatccgggtttaaagggagaacaaggaaatccgggactagctggcagtcgcggcgagatt ggagcacctggacctattggaattactggtgctaagggaatcagaggtgatcctggtgta cgaggtgaacccggtttaatgggcccacctggtattataggacatgttggaccatcaggg ccaccaggaaatataggaccacctggtgcttctggattgcctggtatcaaaggtgatgcg ggcgatactggacgtcctggaaatccaggtccaatcggtaaccctggtctacctggaatc gatggaattaaaggcgaaagtggatccccaggctcccaaggactgacaggttctcaagga cctcaaggtccgcctggtgaaagaggtttaccgggcctacttggttcccctggtcctata gggaacagagggttacgcggagctcccggtgaaataggacaacctggaaaaacaggagcg gaaggtcctcccggacctcctggattaataggttctccaggtgctccaggtcacacagga gaaataggaccggaaggaccaactggaaaaccaggaccaccaggtataggaggccgacca ggtgataagggaccacctggagtacctggtgctgtaggaccatcaggtccttctggatta cctggaccacctgggcccaccggacctaccggacttattggagaacgtggtccgaaaggt gaaacaggaccgcaaggtgtagaaggtccacagggaccacgaggaaaacctggcccagca ggtcttgaaggtataaagggggatcgcggagaagagggacaaaaaggagctaaaggacat cggggatttactggtttacaaggattacccgggtctcctggtttagtaggagaaaaaggt atacctggtctaccagggcttcccggtaaagatggagaaccaggtattagaggtaatcct ggacgagaaggcaatccaggtcctatcggacctgtaggaaatcctggatcaagaggtcca tctggggaagaaggtcgccaaggatcaccgggtcttccaggacctcctgggccacctggt cctcctggagaagtgggtttcggttacgatgcggcgtctttagcagcatttataggacaa ggccaaaccaaaggaccagatccacttggagatgaaccaccaagaatatttagtaaagat atcactgaaaaggaacgaagagaattacttttgaaagcgtacgaaaatttaaaatcgtcg tttcaaaaattaatgaaaccggatggtgaaaagaattcgcctgctaaaacttgtcgagat ctatttgttgcttacccggacaaattatctggcgagtattggattgatccaaacgaagga gatattcgagacgcgatcttagtatattgtgatgccgagaaacgtgcaacttgcatttta ccaaatccatcgcgttcaccagagatcattcatatcactgatcaacaggaaacctggttg agcgagatagataacggcatgaagattacatacaaggcagatagtaatcaaatcggtttc ttgcaattgctctcgaaacatgcgaatcagaacatcacgtatcattgtaaaaatagcgtg gcttactttgattacgaaaagaaaacgtacaaaagaggcttgaagcttttagcttggaac gatgttgaattgacaccacgaggtaatcagcgtcttagatatgaaatgataatggatgaa tgcagggtctatcgaaacaactggggtaaaactgttgtctcgtacgaaacggataaacct gtaagacttcctatattagacgtggctctgcgagatatcggaaaacccgaacagagtttt tctattgagatcggtccaacttgttatgattaa

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