Trachymyrmex cornetzi: 108763405
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Entry
108763405 CDS
T11212
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04120
Ubiquitin mediated proteolysis
tcz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108763405
04120 Ubiquitin mediated proteolysis
108763405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcz04121
]
108763405
Enzymes [BR:
tcz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108763405
Ubiquitin system [BR:
tcz04121
]
Ubiquitin ligases (E3)
U-box type E3
108763405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Mis12
Motif
Other DBs
NCBI-GeneID:
108763405
NCBI-ProteinID:
XP_018366497
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MSELSQEEMRRRRLARLEGFNNNNATASSSNAIAPTSPSTSELSKAFPGSISPSIQQQLQ
RTEIPMEVEESNDKQCNITELDNSGIESMEVDESDRKDSIPRSRTTSSSIEVTTDHIHVV
ISRVLRISWKSSVEGTIFLPQTAAYTLKQKQLDFSEIINQALMEILCMFSKGEDLLNDIT
IDMSSDRQDSPNNQASPLLSPVMALPSYQLPTMPLPIGSKSSQPRSLTYLLNCYSRIAIE
ERNHPKRSSIPPLSNVLTVLKTQCVQYSSLVLQGLVGICEASVIPMCTTYLLYPILSQSL
PRGYLHELVAKTHTNSSTFNKIFTPVLQGLYLSMQQASLVGNTHRRPIEALEELIEIRCG
PGGKIRPICRLITNQVQFLPDIMTSAAGRELTRTSFLGPFLSVSVFAEEQPKVADKFFSG
NHVTDKSVNLSLQQELESTRTSLHKMFYAILANSNCRDATLTYLAALLRHNEKRAQIQTE
EFSLAGDGFMLNLLSVLQMLSVKIKLDTVDPLYPFHPSSFVDVKNDTRLKLTSQEVAEWQ
KHLEKTHKWTESKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLKNMLNELQATEPQ
WKDSPFAEHNRDLIKQWKQQSEQLNKFKSCADAGLIDPVFLRRCLHFYISVAEVLLSLLT
QTAPGNPLPKLPLPQEVTCKFTALPEWYVEDIAEFLVFTLQFCPGVVVSGNMDNPLITWL
LVVVCTPHCIRNPYLIAKIIEVLFVINPSPQGRTEILHEKVMAHPISKTLLASYLMKFYT
DVETTGSSSEFYDKFSIRYHISLILKSMWDSPVHRASIVNESNNGKQFVKFINMLMNDTT
FLLDESLESLKRIHEVQELMSDTTAWSALPQEQQQSRTRQLAADERQAKSYLTLAKETVA
MFHYLTVDIKEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLRVRTQQKYGWQPRTLLSQL
VDIYLHLDCDNFAAALASDERSFCKELFTDAVSRLHKYAIKTTTEIERFIALAERAAIIA
RDNRARDADYGDAPEEFRDPLMDTLMEDPVRLPSGIVMDKAVIIRHLLNSATDPFSRQPL
SEDMLTPMLDLKERISVWKQQKKRSTNI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctcagccaggaagaaatgagaagaaggcgattagcccgactagaaggcttc
aacaataataatgcaactgccagttcgtctaatgctattgctccgacttccccgagtact
tcggagctatcaaaagcattcccaggatcaatatctccgtctattcaacaacaattacag
cgtactgagataccaatggaagtagaagagagcaacgataaacaatgtaatattaccgaa
ttggataattcgggaattgaaagcatggaagttgacgaatctgataggaaagattcgata
ccacgatcgcgtacgacaagctctagcatagaagttacaacagatcacatacatgttgtc
atatcacgcgtcttgcgcatatcgtggaaaagctccgttgaaggaactatattcttacca
caaacagcagcgtacacgctgaaacagaaacagctagattttagtgaaattattaatcag
gccttgatggagattttgtgtatgttctcgaaaggggaagatcttttgaacgatatcacg
atagatatgtcatccgatcgacaggacagtccgaataaccaagcgagtcctctgctaagt
cctgtcatggctcttccgtcttaccaattaccgactatgccattacccataggcagcaaa
tcgtcgcaacccagaagtttaacttacttgttaaactgctattcaagaatcgcaatagag
gaaagaaatcatccaaagcgatccagcatacctcctctttccaatgtactgacggtattg
aaaacgcaatgtgttcagtactccagcctcgttctacaaggattggttggcatttgtgaa
gcttcggttattcctatgtgtaccacttatcttctctacccgatactgtcacaaagttta
cctcgaggataccttcacgagctcgtagctaagacacacacgaattcaagcacgttcaat
aagatattcaccccggtcttgcaaggcctgtatctatcaatgcaacaggcgagcttggtt
ggcaatacacacagaagaccgatcgaggcgctagaggaactgatagaaattcgctgcggt
ccaggcggcaaaatacgtccgatatgccgtctaattacaaatcaagtgcaattcttgccc
gacattatgacgtcagccgccggcagagaacttacgagaacttcgtttttggggccgttt
ctctcagtatcggtatttgccgaggaacaaccgaaagtggctgacaagtttttcagcgga
aatcacgtcacggacaaatcggtgaatttatccttgcagcaagagttggaaagtaccaga
acttcgttgcacaagatgttttacgcaatacttgcaaacagcaattgccgcgatgctact
ttaacgtacttggccgcgttgttgcgtcataatgagaaacgcgcgcaaatacagactgag
gagttttctctggccggagatggatttatgttgaatctattgtcggtcttgcaaatgctc
tctgtaaaaatcaaactggacaccgtagaccctctgtatccgtttcatccctccagcttt
gttgatgtaaagaacgacacaagactgaaacttacctcgcaggaagtcgcggaatggcaa
aagcatctggagaagacgcataagtggacggaatcgaaatttccgactcagtgctggttc
ttgacgttgcattgccatcacatcgcgttactaccggcattgcaaaagtatcaaagaaaa
ttgcgagcgttacgcgacttaaaaaatatgctcaacgaattgcaagccacggaaccccaa
tggaaggatagccccttcgctgaacataatagagatttgattaaacaatggaagcagcaa
tcggagcaattaaataaatttaaatcgtgcgcggacgcaggtctgatagatcctgtcttt
ttaagaagatgcttacacttttatatatccgtggccgaggttttgttgagtcttctgaca
cagactgccccaggtaaccctctccctaaacttccacttcctcaggaagtcacatgcaag
tttaccgcattaccggaatggtacgtggaggatatagcggaattcttggtgtttacgctc
caattctgtcctggagtagtggtaagtggtaatatggataatccgcttatcacatggcta
ctggtcgtcgtgtgtacaccgcattgtatacgaaatccgtatctaatcgcaaaaatcatc
gaggtcctctttgtgataaatcctagccctcagggaagaacggagattctccatgagaaa
gtcatggcgcatcctatatccaagacacttttggcgtcgtatctcatgaagttttacacc
gacgttgaaaccactggctctagttccgagttttacgacaagttttcaatacgttatcat
ataagtctaatcttgaaatcaatgtgggatagtccggtacatcgagcgtctatcgtcaat
gaaagcaataatggcaagcaatttgtcaagtttatcaacatgttgatgaacgacactacc
tttctacttgacgagagtttggaatctctgaagcgtatacacgaggtgcaggaactcatg
tcggacactaccgcgtggagtgcactcccccaagagcaacagcaatcgaggacaaggcag
ctggcagcagacgagagacaagccaagtcttatcttacactagccaaggaaacagttgcc
atgttccactatctgacggtcgatattaaggaaccgttcctacgaccggaattagtcggg
cgattgtgtgccatgctaaatttcaatttgcaacaattgtgcggacctaagtgcaaaaat
ctgagagtgagaacacagcaaaaatacgggtggcaaccaaggacgttacttagccaattg
gttgatatatatttgcatcttgactgtgataattttgcggccgctttagccagtgacgaa
cgttcgttctgtaaggaattattcacggacgctgtaagcaggctacacaaatatgcgatc
aaaactaccacggaaattgagagatttatagcgctcgcggaacgtgcggcgataatcgcg
agagataatcgcgcgcgtgatgcagactacggcgacgctcctgaggaattccgagatcca
ttgatggatactcttatggaggatccagtcagactaccatctggtattgttatggacaag
gcagttatcattagacatttactcaatagtgccacggatcctttcagtcggcagccactt
agcgaagacatgctgacaccaatgctcgacttgaaagaaaggatatctgtatggaaacaa
caaaaaaaaagatcgacgaatatataa
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integrated database retrieval system
