Trachymyrmex cornetzi: 108763510
Help
Entry
108763510 CDS
T11212
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04140
Autophagy - animal
tcz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108763510
04148 Efferocytosis
108763510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108763510
Membrane trafficking [BR:
tcz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108763510
Hops complex
108763510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
PipB2_N
YlzJ
Motif
Other DBs
NCBI-GeneID:
108763510
NCBI-ProteinID:
XP_018366702
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSAMLTADWFPLGRDVYFRKFELYPISFQHEISNNNLIVAAPYGGSIAVTRNPKKLVKIQ
GASKPLILLYTSSGKLTAKLQWSSGQLISFDWSQQEELLCVQDDGMVLIYDMFGTYQHTF
SMGNAAKDTKVVDAKFFMTSNSTGIAVLTSTNRIFLVNNVSEPKVRQITDIPRYSPIDCW
YMVHCERETQVILSNREGIFVIHQSHQNTFSFNNLFNNKINSVTAIAASSNNRHIVLYSD
TGHLYIGSIDFREKYCECYTNMKEPLTNIAWCGTEAVVCSWNSTIMVVGRMADTIVYNYD
GPVHLVTEIDGVRVLSSSSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHKAD
SYIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKTIDSEYYVQMCRTLR
VLNAVRHPAVGIPLTYAQFNILTNQVLLDRLVARRHYYLSIQIARHLQLPEIDGESRILA
HWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPRAH
QQVPLLLTLGEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYVK
YCQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSRDALLQSAQENFRLARNDTNA
SLTEEQIKLLKYQRSLEDTLHESIVGKPLHDTVRILLLRNELKLADKLRSEYKIPDRRYW
WLRIQCLAEQGLWNDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLAKVKDDLKVKY
LVKLNLLSEAAQTAYEQKDASALTFVLAQCGSSDRQFVDKINMLLASLKN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgctaactgccgattggtttcctctgggacgagacgtatactttcgcaaa
tttgaattatatccaatatccttccaacatgagatttccaacaacaacttgatagtagcg
gcaccatacggaggctccattgctgtaacaagaaatcctaagaaacttgtcaagatccaa
ggggccagcaaacctttaatattgctgtatacgtcatcaggaaaattgacagccaagttg
caatggagcagtggacaactgatatcgtttgactggtctcaacaagaagaattgctgtgt
gtgcaagatgatggcatggttctcatatatgacatgtttggaacttatcaacataccttt
agcatgggaaatgcagccaaggatactaaagttgttgatgcaaaattctttatgacatct
aacagtactgggatagctgttttaacgtccaccaatcgtatatttctagtaaacaacgtg
tctgagcctaaagtccggcaaatcactgatataccaaggtatagtcctattgattgctgg
tacatggtacattgcgaaagagagacacaagtgattttgtcaaatagagaaggaatattt
gtaattcatcagtctcatcagaatactttttcatttaacaatttgttcaacaataagatc
aatagtgtaacagcaatagctgcgtctagcaacaatcgacatattgtgctttactctgat
actggacacttgtatatcggttcaatagacttcagagagaaatattgtgaatgctataca
aatatgaaggaacctctaacgaatatagcttggtgtggcacagaagctgtggtgtgcagc
tggaacagtacgataatggtagtgggacgtatggctgatacaatagtatacaattatgat
ggtccagtacacttagttacggaaatcgacggagtacgcgtgctgtcgagcagttcccat
gaaatgattcagaaagtaccaaacgttgtgcaaagaatatttagaattaactcgacggat
cctgcatcctatctcttagaagcctctaagcaatttcaaaagaagagccacaaggccgat
agttatatagatttagtgaaagataaactggattcggcaataaaggcatgcatcgacggt
gcgagtcacgaattcgattttgaaacacaaaaaattctgatgagggctgccaaatttgga
aaaggatttagcaaaacgatagattcggaatattatgttcaaatgtgtaggactttaaga
gtcttgaatgcagtgaggcatcctgctgtgggcattccgttaacatatgcgcaatttaat
attctcacgaatcaagtgttactagaccgactggtagcacgaagacattattatttaagc
atacaaatagcacgtcacttgcaattacccgagattgacggggaaagtagaatattagca
cattgggcttgttacaaagtgaaacaaacgcagttagataaggaacaaatagcagaagaa
attgctgataaattaggatatgcacctggtgtttcgtatagcgaaattgcgaaaagagcg
gcggattgcggacgaaaacaattggcgattaaattaattgactacgaaccgcgagcgcat
caacaagtacctttattattgacacttggcgaggaacgtgctgctctacataaagccgta
gaaagcggtaatacggatctagtctatactgtcattcttcatctcagagaaaacatgaca
cttggcgactttcaaatgtctataatgcattgtcctctagcaatggcattatatgttaaa
tattgtcagagccataatagagagacattgcgtgatatttataatcaatacgacgatttt
cattcgcaagcggtgtggtttatcaccgagagttatcaacgaaaaaatacgatgtcgaga
gacgcattactgcaatcggctcaggaaaattttagattggctcgtaatgatactaatgcg
tcgttaacagaagaacagataaaattattgaagtatcagagatctttagaggatacgtta
cacgaatcgatcgtgggaaagcctttgcatgataccgtgagaatattattattgcgtaac
gagttgaaattggcagataagttacgatcggagtataaaataccagatcggagatattgg
tggctaagaatacagtgtttagcagaacaaggtttatggaatgatttggaaaagttctct
aaaagtaaaaagtctcctattggctatgagccgtttatagatgaatgcctgaagtataat
gaaaaattagaagcaaggaaatatttagccaaagttaaagatgatctcaaagtgaagtat
ttagtcaagttaaatttgcttagcgaagcggcacaaacagcatacgaacaaaaagacgct
tccgctctcacatttgtgctggcacaatgcggatcatcagacagacaattcgtagataaa
atcaatatgttattagctagtcttaaaaattaa
DBGET
integrated database retrieval system
