Trachymyrmex cornetzi: 108763528
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Entry
108763528 CDS
T11212
Name
(RefSeq) ribonuclease Z, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcz03016
]
108763528
Enzymes [BR:
tcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
108763528
Transfer RNA biogenesis [BR:
tcz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
108763528
Prokaryotic type
108763528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
108763528
NCBI-ProteinID:
XP_018366735
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MRSNVCSFARHVIKRNYRTLLFFPVGRSLRYNLSAPCKQFSWIYTNQIMPRSVEHMLGMQ
RMRQKIKEKSAKYIGNTKVSLQILGTGAYGTSRCVYLTAGHTRYIFNCGEGTQRLAYEHK
YKLIKLEHVFITSATWNNLGGMPGMLLTIQDAGVPKINIHCPKGTMEIFNTIKKTVLLQA
LKINEAKCNESEPYIDSVMSVSYVSIINPNAQETESIDVEKDVIDINYYDYKTNTNSKRV
PDRIEKKSKVQKIDQKSDNRISSVMSYICKLHPRAGTLSLEKCLEKGVKPGPLLGQLKTG
ADITLPDGTVVLSKDVCSPATPGPTFIIVECPSEDYLENFVNHPAFVRHQTGTTNKDDIP
YCVIHFTPQDVMDNSRYVNWMSKFGLNTRHIVVNEENQCMGTEAMHRHQHKLHMLHSEIF
PFLSEESFQEKTRVEDLPIIHRPKTHHTVHLQPKLRFDTKNEVSLHPEEYVNEVFEIDGI
LDALAELQTEINARTKTLHIGNEYPKIVMLGTGSSIPSKVRNTSGILLRVDKDHSMLLDC
GEGTFGQIVKIYGRSEAHNILKTIKGVYISHMHADHHIGLIGLLKARRKVTEDPLYLLAP
GHINVWLHMYHTRFEPILHRMTLIKNNEFCMDSHNPELYKYRNIYNTLNVQAVRTVYVEH
CPYSYGVSVTLHNGKKIVYSGDTMPCARLVELGQNCDLLIHEATMEDDLIEDARLKFHST
VSQAIQAGEKMKSKFTLLTHFSQRYSVIPHLPDNKNGPKLDNVGIAYDNMHISLSQLPLL
PLMYPTLKIMFNKYYLEIEDRAARRQRIAA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccaacgtgtgctcgtttgcacgtcacgtcataaagcgtaattatcgcacgttg
ctattctttcccgttggccgaagcctccggtacaatctatcggcgccctgcaagcaattc
tcgtggatttacaccaaccagatcatgccacgttccgtcgaacatatgcttggcatgcaa
cggatgagacagaagataaaagagaagtcagcgaaatatattggaaatacaaaggtgtcg
ttgcagattctgggtactggagcttatggcacatcacgatgtgtctatttgacagcaggt
cacaccaggtacattttcaactgcggcgaaggaacacagagattggcatacgaacataag
tacaagctaatcaaattggagcacgtatttataacatcagcaacttggaataacttgggc
ggcatgccgggaatgcttctgacgatacaggatgctggagtgccaaagatcaatatacat
tgtcccaaaggaacaatggagatatttaatacaatcaagaagaccgtgctgctgcaggct
ctgaagattaatgaggccaaatgtaatgagtcggagccatatattgattcagtgatgtct
gtttcgtatgtttccattataaatccaaatgcgcaagagacagagtctattgatgtagaa
aaagatgtaatcgatattaattattatgattataagaccaacacaaatagcaagcgagta
cctgatagaatagagaaaaagtctaaagtccagaagatcgatcagaagtctgacaataga
atatcgtctgtaatgtcttacatttgcaaattgcaccctcgagcgggtacattatcctta
gagaagtgtttagaaaagggagtgaaacctgggcctctactcggtcagctcaaaactggt
gcagatattactcttcctgacggcacagttgttttgagcaaggatgtttgctcgccagca
acgccaggccctacttttataattgtagagtgtccatcagaagattacttagagaatttt
gtaaatcatcctgcctttgtgcggcatcaaacgggaacgacgaacaaagatgatatacca
tactgcgtcattcattttactccgcaagatgtgatggataattctcgctatgtgaactgg
atgagcaaatttggtcttaatacgcgtcatatagtcgtaaatgaagagaatcaatgcatg
ggcaccgaagcgatgcacagacatcagcacaaactccatatgctgcactctgagatattt
cctttcttaagtgaggaaagcttccaagagaaaacaagggtagaagatctacccattata
catcgtcccaaaacacatcacactgttcatctacaaccgaaattaagattcgatacgaag
aatgaggtatcgctgcacccagaggaatatgtaaacgaagttttcgaaattgacggcatt
ttagatgcgttggcggaactccaaacagagatcaacgctcgaacgaagacgttacatatt
ggcaatgagtacccgaagattgtcatgttgggcactggatctagcataccaagtaaagtc
agaaacacgagcggcatacttctacgagtggataaagaccacagtatgttactagattgc
ggagagggaacattcggccagatagtgaaaatctatggaaggtctgaggcacataatatt
ttaaaaacgataaaaggagtgtacatatcgcacatgcacgcggatcatcacataggattg
attggtttgctgaaggcgagaaggaaggtcacggaagatcctttgtatctgttagcacct
gggcatatcaatgtgtggttgcatatgtatcatacacgttttgagcctattttacatcga
atgacattgataaaaaacaacgagttctgtatggactcgcataatccagagttgtataaa
tacagaaacatatacaatacattgaacgtgcaagccgtgaggacagtatacgtcgagcat
tgtccttattcttatggcgtttccgtgacactccataatgggaagaaaatagtatatagt
ggcgacactatgccctgtgcgcgtctcgtggaacttggtcaaaattgcgatctactcatc
catgaagcgacaatggaggacgatctgatagaggacgcgagactgaagtttcattcgaca
gtctcgcaggctatacaggcaggtgaaaagatgaaatcaaagtttacactattgacgcac
tttagtcaacgctattctgtaatacctcatttgccggataacaaaaatggtcctaaacta
gataacgtcggcattgcatacgacaatatgcatattagcttgtcgcaattaccgctcttg
cctttgatgtacccaacattgaaaataatgttcaataagtattatctagaaatagaggat
cgagctgctcgaagacaacgaatagcagcttaa
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