Trachymyrmex cornetzi: 108763545
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Entry
108763545 CDS
T11212
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108763545
04121 Ubiquitin system [BR:
tcz04121
]
108763545
Enzymes [BR:
tcz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108763545
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108763545
Ubiquitin system [BR:
tcz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108763545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
Vgb_lyase
DUF2237
zf-B_box
Motif
Other DBs
NCBI-GeneID:
108763545
NCBI-ProteinID:
XP_018366786
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MLRNKTHSIIQNIVRNDLIIVRQILVNNARLDRFSSVRTKGRGGSNTNKLPCKSSFREKN
RKTRFFTRTQETSLELYQQFLPTTMNQLKSPRNRHSMQFTSKPRKQDDQHFTPRKFTIAK
KVRSFPDSSSDRFLKQFPPGKLSQQHSKDNSFSHSILNHVDSLNEYPKLYSPRPTIASSL
SCSSESRSSSSDENLPNHSPIHQLDTDSPDHFEYFRMFEDASVTDVLGPNFSSANYDESC
KANYETFEDLNMNLLKIDLLDDISSSRQSLIHEEHSPSAQGDVLNDSLITLMTKDLEKDE
NDIAIPSREQQTRSPSSQRDPSDLLLIPSISEELEVDNKIKKENYSRQQSPARVLNVEEN
AVSTISMMNKEGAAKETENRSFNFSVKAMKSYKCIDHPCTQLFYCQTCCRTICKECATHC
IHKHVTVEFLEFLESAQRQAEEVLIEAYLGIDVLVDDMENMGLDIAALDQRTREALTDVK
YFSRRMWSAVEEREKKLFKQIVETRRWKYEVLQEKYMNLKEDKARLVQAISALKCAIQEA
RSSPDDLLQKKDMVLAEIWQIRQSRKTKARSLRDENWISFRSSDNNVLSVIANGGNVLVN
GPGTIGDRLPNRDYKSLQSYFPYGINEQMMQPIPRGRPITDYDHNICLPNRKHELQVKST
DVIILGYFGENNPDNLCRPWGLICDNEGNIIISDRSNNRIQIYREDGTLVRKFGTYGNGP
CQFNRPAGIAIDARRRLIVVDKDNHRVQILTVEGEFLRAFGEHGEKQGQFCYPWDVAVNS
ACEIAVTDTRNHRVQLFSPEGIPLRMFGGQPHLLRYLDSPRGICFNNEGKLIVTDFNNHH
VLIIDYNMVEMRILKCEKESKGKRQDGETGDGQNEENTPTFQRPQGIIAADDGSILVADS
RHNSIKAFNSVGSLIYSYKPGQEEMDRPLGIALHWDGRMAFTDYGRNYVRLVKLEHHMDP
MPRNAIMFG
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcttagaaataagacacactctataatccaaaatattgtacgaaatgacctcatcatc
gtgagacaaatccttgtcaacaacgcgagacttgatcggtttagttcggtgcgaacaaaa
ggccgtggtggttcgaataccaacaagcttccttgcaaaagctcatttcgagaaaagaac
aggaaaacaagatttttcactcgtacacaggagacttccttggaactttaccaacaattt
ttgcccaccacaatgaatcaattaaaatctcctcgcaaccgccactccatgcaatttaca
agtaagccacgaaaacaagatgatcaacattttacgccaaggaagtttacaattgctaag
aaagtccgctcatttccggattctagttcagatcgctttctgaaacagtttcctccgggg
aaactatcgcaacagcattccaaggataattcgtttagccattcgattctcaatcatgta
gattctttgaacgaatatccaaaattgtacagtccaagacctacgattgccagttcatta
agctgttcaagtgagagtcggtcaagctcttcggatgaaaatctaccaaaccattcgcca
attcaccagctggataccgattctccggaccatttcgagtattttcgaatgtttgaagat
gctagcgtaacggatgtactcggtccgaacttctcaagcgctaactacgacgagagctgc
aaggcgaactatgagacattcgaagatctcaatatgaatcttctgaagatcgatctgctg
gacgacatctcctccagtcgacaatcactcatacatgaggaacatagcccaagtgctcag
ggagatgtgctcaacgattcattgataacattgatgacgaaagatctggagaaggacgag
aacgatatagctataccatcacgagagcagcaaactcgtagcccaagtagtcaaagagat
ccatccgatttgttactgataccatcgatatcagaagaattagaggtagataataaaata
aagaaggaaaattactcgagacagcagtcacctgcgagagtcttaaatgtagaagagaat
gcagtcagcacaatatcgatgatgaacaaggaaggagcggcgaaagaaacggagaaccga
tcgttcaatttttctgtgaaagccatgaagtcgtataaatgcatcgatcatccatgcact
caattattttactgtcagacttgctgcaggacaatctgcaaggaatgcgccactcattgc
attcataaacatgtaacggtggagtttttagaattcctcgaatccgctcagcgtcaggct
gaagaggtgctgatcgaggcctatctcgggatcgatgtcctcgtggatgatatggaaaat
atggggttggacatagcagcattagatcagagaaccagggaggcgctcactgatgtgaag
tacttttcacgtagaatgtggtccgcggtggaagaaagggagaagaaattgtttaaacaa
attgtggaaacgcgtcgatggaagtacgaggttcttcaggagaagtacatgaatttaaaa
gaggataaggcacggctggtacaggccatcagcgcactcaaatgcgctatccaagaggcg
cgatcatcccctgacgatcttttacaaaaaaaagatatggtattggctgagatttggcag
attcgtcaaagtcggaagacaaaggctcggtcactccgagatgagaactggatctccttc
aggagttccgataacaacgtgctgtccgtgatcgccaacgggggaaacgttttagtgaac
ggcccgggcacgatcggagatcgtctaccgaatcgcgattacaaatcgttgcaatcgtac
ttcccgtacggtataaacgagcaaatgatgcaaccgattccgcgcggtcgtccgataact
gactacgatcataatatctgtttgcctaaccgaaaacacgagttgcaagttaagagcacg
gatgttataatccttggctactttggtgagaacaatcctgacaatctttgccgtccgtgg
ggattaatttgcgacaacgaaggtaacattataatcagcgatagatccaataatcgcata
caaatctatcgcgaagacggcacgctcgtcagaaaattcgggacctacggcaacggccct
tgccaatttaatcgtccagccggaattgccatcgatgccagacgtcgcctcatcgtggtc
gataaggacaaccatcgcgtccagattctgacagtggagggtgaattcctgagagccttc
ggtgagcacggcgagaaacagggccaattctgctacccgtgggacgtggcagtaaactca
gcttgcgaaattgcagttacagacacgagaaatcatcgtgtccagctatttagtcctgag
ggtattcctctacgcatgttcggcggccaaccgcatctattgaggtatcttgactcgccg
cgcggtatttgcttcaataacgagggcaagttgattgtcacggacttcaacaaccaccac
gtattgataattgactataacatggtagaaatgcgcatacttaaatgtgaaaaagaatcg
aaaggcaagaggcaagatggagaaaccggtgatggacagaacgaggagaacacccccacg
tttcagaggcctcagggcattattgctgccgacgacggtagtattctagtcgcagactct
cgtcacaattcaatcaaggcgtttaactcggtgggttcgttgatctattcctataagcct
ggtcaggaggaaatggaccgtccattgggtatagcccttcattgggacggtagaatggcg
ttcacggattatggccgtaattatgttcgcttagtaaagctggagcatcatatggacccg
atgccgaggaacgctattatgtttggttga
DBGET
integrated database retrieval system
