Trachymyrmex cornetzi: 108763629
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Entry
108763629 CDS
T11212
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04150
mTOR signaling pathway
tcz04310
Wnt signaling pathway
tcz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108763629
04150 mTOR signaling pathway
108763629
09133 Signaling molecules and interaction
04519 Cadherin signaling
108763629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108763629
Membrane trafficking [BR:
tcz04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108763629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
LRP1-like_beta_prop
Vgb_lyase
cEGF
EGF
PRKCSH-like
Motif
Other DBs
NCBI-GeneID:
108763629
NCBI-ProteinID:
XP_018366923
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MITWNAWLAIACFLCGFFSCDGSPLLLFGTHKDIRVANISRSNKVNIIIKDLSEGASLDF
FYELELICWSDSSLEMIQCIRYNGTHTGEKITVVNSSLISPDGLACDWFTDKLYWTDGEK
NRIEVTSIDGRNRKVLFWNDIYQPRAIALAPMEGYLFWTDWGDVPKIERASMDGDPNTRE
IIVSDDIFWPNGLTIDYENRLVYWADGRLHFIAVMDYHGGNRRRLVNRDLDYPFAITFFD
NRLYWTDWKTWCIHSYDITQPQSHPRELFHGEYIPGSDIEVWDVRRQPGGNNPCKRNNGN
CSHLCLLSSKEPGYSCACPTGVKLIDKYTCANRPEQLLLIVQRTEICRISLDSPDYTNFV
LPLTGIKHAIAIDFDPVEELLYWTDEQTTAIRRAPLDGMSQQNVISTEVANPDGIAIDWI
ARNLYWTDTGTDRIEVARLDGKYRRVLVNEDLFEPRAIALAPEHGWMFWTDWSEKRPKIE
RSNLDGSERILLITKDIVWPNGIALDLERNKIYWCDAKTDKIEVSNMDGTDRREVITDNL
PHLFGLTLLGDYLYWTDWQRRSIDRAHKLTGGEREVIVDQVPNVMGIKAIHLGKMNASNS
PCARDNGGCSHLCFNRPNNRYVCACQMGYELTKDKRTCVVPEAFLLFSRRENLGRISIEN
INNDNIIPVTGIKDASAIDFDLSENRIYWTDVKLKTITRVFINGSDIEKIVDLGLESPEG
IAFDWIAHNLYWSDTVTRRIEMIRIEGGSRKILLWQNLLEPKNVAVDPERGHLYWAEWGN
TGSIERAFLDGTQRQVIVSHIGRANGLTIDHVGRKLYWADISTPAINCYDLLTQRRNVII
SRHIVYPFSVTQYRDFIYWADWNTGDIERADKITGANRTKIHTNLASVTDLKVFHASRQS
GSNPCAIANGNCSHLCIALPDSYGGASVIHKCACPTHYNLARDNRTCMAPRHFMIYSQRT
AIVRYLPDQTDDCADVTLRVQGLKNVRAIEFDPVTQHVYWIDGRVTIRRALENQTQQQQQ
SSTVVVSIGNGHLFDLALDPLGRLLFWTCSTNDALNVTRLDNGSALGVVVKGDGEKPRHI
AIYSQQRLLFWTDIGKKRVVRSKMDGKERHVIAGDLMEQPTGLTVDTTTYAIYWAYSKHI
ECSNFEGSDRKLLTSTQGSAMHLAVLFNYLYWYDRDTQVIERVNKTFDGNTRRGTQVTVG
RISFTDLIAINMPEDLLMETHVCSPFNDYGGCSHFCVGTNTIADEATATLPRCSCPKSLV
LSDDGRTCRAAPVCGNDHFTCAAPNAAVSKDCIPATWKCDGQTDCSDGSDELGCPTCSRD
QFRCQNHCIELSLVCDGTQQCPDGSDEAQCCEIGQFQCVGNGVCISGTSLCDGWDDCADG
SDEVPPACMSPHNPHRQNAGPGINESGKTTYIIIILAVVFVVGTSILSYYYCRKKFTGNE
GLPDILHDSAGDPLSPKPSNNRMVKPMFVSQKNNRKDEGGSGGLKVGIEAVRMSMLNGSS
LGSSYDRSHITGASSSTRGSSAGGYPQETLNPPPSPATIVSSTRCSSSNASRYKPYRHYR
SINQPPPPTPCSTDVCDESDSNYPARYRYESEPFPPPPTPRSVYHSDAAISCPPSPSSRS
STYFSPLPPPPSPVP
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtggaacgcgtggctcgctatcgcttgctttctctgcggctttttttcttgc
gatggctcgcctctacttttatttggtactcataaggacatcagggtggccaatatatct
cgcagcaacaaggtcaacattatcatcaaggacttatcagaaggtgcgtctctggatttc
ttctatgagcttgagctgatttgttggtccgacagcagtttggagatgatacagtgcatt
cgctataatggcacgcacactggcgagaagataacagtagtgaactccagtttgatatct
cccgatggtctcgcttgcgattggtttacggataaactgtactggacggatggtgagaag
aacaggattgaggtgaccagcatcgacggccgtaacaggaaggttctcttctggaatgat
atttatcagccgcgtgcaatcgccttggcccccatggaaggatacctattctggaccgat
tggggcgatgtgcctaagattgaacgtgcctcgatggatggtgatccaaatacacgcgag
atcattgtctctgacgacatattctggccgaatggcctgacgattgattatgaaaataga
ctcgtctactgggcggatggtagactacactttattgctgtaatggattatcatggtggt
aatagacgcagattggtcaatcgcgacctggactatccatttgccataacgttttttgat
aatcggctttattggaccgactggaagacttggtgcatccattcgtatgacataacccag
ccacaatcacatccacgtgaattatttcacggcgaatatatacctggtagtgacattgaa
gtctgggatgtaaggaggcaaccgggtggcaataatccttgcaagcgaaacaacggcaat
tgttctcatctgtgccttctgagctcgaaggaacctggttatagttgtgcctgtcccacg
ggtgtcaaactgattgacaaatacacatgtgccaacagaccggagcagttgctactaatt
gtccaacgaaccgaaatctgccggatatccttggactcgcctgactatacaaatttcgtg
ttgccgctcactggcattaaacatgcaattgcaattgacttcgatccagtggaagagttg
ctgtattggactgatgaacaaacaactgccatcaggcgagctcctctcgatggaatgagt
caacagaatgtgatttccacggaggtggcgaatccagacggtattgcgatagactggatc
gctcgcaatctctattggaccgataccgggaccgatcggatcgaagtggcgcgactagat
gggaaatatcggcgtgtgctggtgaatgaagatctattcgaaccacgagcaattgcgctc
gcacctgagcatggctggatgttctggaccgattggagcgaaaagcggccgaaaattgag
cgcagtaatctggacggcagcgagcgtatattgctgatcaccaaggacattgtctggcca
aatggtatcgctttggaccttgagcgcaataagatctattggtgcgacgcgaagaccgac
aaaatcgaggtgtctaatatggacggtactgatcggcgtgaagttatcaccgataatctg
ccacatctgttcggtctcaccttactgggcgattatttgtattggaccgattggcagcgt
cgcagcatcgatcgggcgcacaagctcaccggtggcgaacgtgaagtcattgtcgaccag
gtacccaatgtaatggggatcaaggccatacatcttggcaaaatgaacgccagtaattct
ccgtgcgcccgtgacaatggtggatgtagtcatctctgttttaacagacctaacaacagg
tacgtctgcgcctgtcagatgggctacgaattgacaaaggataagcgcacgtgtgttgtg
ccggaagcgttcctactattttctaggagggagaatcttggtcgaatcagtattgagaac
attaacaatgataatatcatacctgtcactggtatcaaagacgctagcgctatagacttt
gacttgtccgagaatcgcatttattggacagatgttaagctaaaaaccattacacgtgtc
tttataaatggatcagatattgaaaaaatagtcgatctcggtctagaatcgccagaaggt
attgcgtttgattggatcgcgcacaatctctattggagtgatactgtcacgcgtagaata
gagatgataagaatagaaggaggcagcaggaaaatacttttatggcaaaatcttctcgag
cccaagaatgtggctgtggatcctgagagaggccatttatattgggccgaatggggtaac
actggcagtatcgagagagcttttctggatggcacacagcggcaagtgatcgtttcgcac
atcggccgagcgaacggtctgacgatcgaccatgtggggcgcaaattgtattgggctgac
atttcgacacccgcgatcaactgctatgatctgttaacgcaacgaaggaatgtcattatt
tcgcgtcacatagtctatccgtttagcgttacgcagtatcgggactttatttattgggcg
gattggaacacaggcgacatcgaaagagcggacaagatcaccggagcaaatcgtaccaag
atccacactaatctggcatcggtgacggatttgaaagtgtttcacgcgtcgcgacagtct
ggttcgaacccatgcgctattgcgaatggcaattgcagccatctttgtatcgctctaccg
gattcgtatggcggtgcgtccgttattcacaaatgcgcgtgtcccacgcattataatctg
gcgcgggacaatcggacctgcatggcgccacgacatttcatgatctacagtcagcgcact
gcgatcgtacgttatttacctgatcagacggatgactgtgcggatgtaacgttgcgtgta
cagggtttaaagaacgttcgcgcgatcgagttcgatccagtgacgcagcacgtctactgg
attgatggtcgcgtgacaattcgtcgtgccttggagaaccagacgcagcagcaacagcaa
agcagcacagttgtggtatccatcggaaatggccatttgtttgatcttgcactggatccg
ctcggacggctactcttctggacatgttcgacaaacgatgcgctcaatgtcacgcgactg
gacaatggttcggctctcggcgtcgtggtgaaaggtgatggtgagaagccacgtcacata
gcgatctactcgcaacagcgattactcttttggacggatatagggaagaagcgggtggta
cgcagcaagatggacggcaaggagcgccacgtgattgccggtgatttaatggaacagcct
actggcttgacagtggataccacgacgtatgccatctactgggcatacagcaaacacatc
gaatgctctaacttcgagggtagcgatcgtaagcttttgacttccacgcagggctcagca
atgcatctagcagtccttttcaattatctctattggtacgatcgcgatacacaggtaatt
gaacgggtaaacaagacgtttgatggaaacactaggcgaggcacgcaggtgacggtaggt
cgcatatctttcacggatcttattgcgatcaacatgcctgaggatttgctcatggagaca
catgtatgcagcccattcaacgattacggtggttgctcgcacttttgcgtcggcaccaac
actattgccgatgaggctactgcaacattgccccgttgctcatgtccgaagtcgttggtt
ctatccgacgacggtcggacttgtcgcgcggcgcctgtctgcggaaacgatcacttcaca
tgtgctgctcctaacgcggccgtgagtaaggattgtataccagccacgtggaagtgtgat
ggccaaaccgactgttcagatggcagcgacgagctgggatgtcctacttgctctcgcgat
caattcagatgtcagaatcactgtatcgaattgtctttggtatgcgacggaactcagcag
tgtccggatggttcggatgaggcacaatgttgcgagatcgggcagttccagtgcgtcgga
aatggtgtttgcatttccgggacatcattgtgcgacggttgggacgattgcgccgatggc
agtgacgaggtaccgccagcttgcatgagcccgcacaatcctcatcgccagaacgctgga
cctggcatcaatgaatctggcaagacgacttacattatcatcattctggcagtggtattt
gtggtcggaacaagtattttaagctactactactgccgtaaaaagtttaccggaaacgaa
ggcctgcctgatatactacatgattcggcgggagatccactgtcgccgaaacctagtaac
aatcgaatggtgaagccgatgtttgtttcgcagaagaacaatagaaaggatgagggagga
agtggaggcctcaaagtcgggatagaagctgtaaggatgtccatgttgaacggaagtagt
ctgggctctagttatgaccgtagtcatattacaggtgcgtcaagttctaccagaggaagc
tctgcaggtggatatcctcaggaaactttgaatccgccgccgagtccagcgacgatcgtt
agctcgacacgttgctcgagcagcaatgcatcccggtataagccatatcggcactacagg
agcattaatcaaccgccaccacctactccatgtagcaccgatgtttgcgatgaatcagac
agcaattatccagcgcgctatcgttatgaaagcgaaccatttccaccgccgcccactcca
cgttctgtctatcacagcgatgcagcgatcagttgcccaccgtccccgagttccagatcg
tccacgtattttagtcccttaccaccaccaccgtcgccggtgccttaa
DBGET
integrated database retrieval system
