Trachymyrmex cornetzi: 108763863
Help
Entry
108763863 CDS
T11212
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108763863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108763863
03036 Chromosome and associated proteins [BR:
tcz03036
]
108763863
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108763863
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108763863
PBAF complex
108763863
GBAF(ncBAF) complex
108763863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
108763863
NCBI-ProteinID:
XP_018367284
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFEAPEVLTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQILQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGS
RMDRTVDMLMAAERALIQNRCMTVPSIFVRPDVDKNTAAKVKDVVRKHQGTVVENETDAT
HIIYPPVDPMEEEYARPCMRRERSVLIHWYYFPDSYDSWSTLDLPWDYPEGTYTNTNSRS
MYKVSATWALDLDQYNEWMNEEDYEIDDNGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRK
RSPSPPPKLGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMEDPPAEPRIVE
VVATPTNPPITGQGNATTGNSTLTSTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGG
QDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINY
QVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPNITGA
LGIEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDW
NKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAF
LASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASASSDGKYDPSAGLAQSG
IAGTGPPEPPDDTSASTTTPSVPAGAASSPHSTAPTPEAKKEDQDKSKDAMDVEPSQIEV
TKKEDETKEGEEDTKSTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLK
AAEFRARQQAHQRLAQEQQQQQQQQQQNQQHPPWQPPGAQQQQQQPPSPQAQPQQQPPPH
TPPQQT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttaggcccgaaaaaggacggcggacctaacgccaagttcttcgaggcgcca
gaagttcttacccagcttgatggtgttaagcagtggctgctcaagaattgcaagaagtat
gtacaaacggatccgcccactaataagagcttagccacgttgctggtacagattctgcag
tttcaggaggataatcttggcaaaaatgtatcaaagccacctatgactaggcttccaatg
aaatgcttcctagattttaagcctggtggtggtgtgtgtcacatattagctactgcttat
cgttttaagcaggagcaaggatggaggcgttttgattttcctggtggaaaatcagggtcc
cgtatggatcgtacagtggacatgctaatggcggcggaacgtgctttaatacagaataga
tgtatgactgtaccaagtattttcgtgagaccggatgttgacaagaatacagctgcaaaa
gtaaaagatgtagttagaaagcatcagggcactgtcgtggagaatgagacagatgctaca
cacattatctatcctccagtagatccgatggaagaggaatacgcacgaccttgtatgaga
cgcgaacgatcggttctaattcattggtactactttccagacagctatgattcctggtca
acactggatcttccatgggactatcccgaaggaacttatacaaacacaaattcaagatca
atgtataaagtatcggctacatgggcgttagacttggatcaatataatgagtggatgaat
gaagaagattatgagatagatgataacggtcagaagagagtacacaaatataggctttcg
gtggaagatttgatggcacaaccgtctcatccaccgcctgcgaagaaacctaagaggaaa
cgatcacccagcccacctccaaaactcggcaaacgtaagagtagcagagcaccgtcaggt
atccaaagtgcttcctccgcgtcatcggcgacagctccgaagaaatcgcgcggcggtgaa
gaagaggaagatttaactcagggaatggaggatccgcctgcagaaccccgtattgtcgag
gtggttgctacgcccacgaatccaccaatcacaggtcagggtaatgcaacaacgggtaac
tccacattgacatctaccggtagtaaaaagcaagacagcgagcttcaacctcttaaatct
ggcaacttgaccgatcttgacgaacaaatggaaggagacaaagggagctctcaaggtggt
caagatagagaagaaagagacactagtaaagaaagaggtgaaggtggcaaaggtgatgaa
ccggaagataatgtgacggaacaaacgcatcacatcgttgttcctagctactctgcctgg
tttgattacaattcgattcataccatagagaagcgggctctatcagaattcttcaacggt
aaaaataagtccaagactccagaaatttaccttgcttatcggaattttatgatcgacact
tatcgattaaatccaactgaatatattacatcgaccgcgtgcaggcgaaatttagcagga
gatgtatgcgcgattatgcgtgtgcacgcgtttttagagcaatggggactcattaactat
caggtagacgcagaatccagaccgacaccaatgggacctccaccaacgtcacatttccat
gttttgtcggacacgccatccggtttggcaccagtcaatccgaatccgccgaaaacacca
caaccatccgctgcgaagatgttgctcgacttggagaaaaaaccaaacataacgggagcc
ctgggaatagaagaaaaggcttcggcgggcgcaatggcaaacttcggtctgaaaatcgat
cagtattcgaggaaaccggcagtactgaagaacaagcaagcggcgggtgcgacacgtgat
tggacagaacaggaaacacttttactattggaaggattagaattgcacaaggacgactgg
aacaaagtatgcgaacatgtgggatcgagaacgcaagacgagtgtatcttgcacttctta
cgtttacctatagaggatccatatctggaagaaggcgggcctgaaggattgggtcctttg
gcttaccaacccgtaccattctcgaaagctggtaatcctgttatgagtacagtcgccttc
cttgcatcagtcgtggatcctagagttgccgcgagcgcagcaaaggcagctatggaagag
tttgctgcaataaaggatcaagtaccagctgccttattggaccagcatttaaggaacgtt
caagctagtgccagttccgacggtaaatatgatccatcggccggtttggcacaatcgggt
atcgctggtacaggaccacctgaaccacctgacgatacatcagcttctaccacgaccccg
tccgtaccggcgggtgcagctagctctcctcattccacagctcctactcctgaagcaaaa
aaagaagaccaagataaatctaaagacgccatggatgttgaaccatctcagatagaagtc
accaagaaagaggacgaaacaaaagagggcgaagaggacacaaagtccaccactgatcca
gaggctgctgaagcaaaagaaaagaaggataaagttgtaagggacgctcagcttcaatct
gcggcagcagcagcgctagcggctgcggctgttaaggccaaacatttagcagctgtggag
gaacgtaaaatcaagtcattggtcgcattactagtcgagacgcaaatgaaaaagctagaa
atcaagctacgtcacttcgaggaattggaaactacaatggagcgtgaacgcgagggtctt
gagtatcaacggcagcaactcatcaccgagcgacagcagttccatctcgagcagttgaag
gcagccgaattcagggcgcgacagcaagcccaccagcgattggctcaagaacaacagcaa
cagcagcagcagcagcaacaaaatcaacaacatccaccatggcaaccgcccggtgcacag
caacagcagcagcaaccgccaagtccacaggctcaaccgcaacaacagccgccaccgcac
acgccgccacagcagacataa
DBGET
integrated database retrieval system
