Trachymyrmex cornetzi: 108764021
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Entry
108764021 CDS
T11212
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcz03037
]
108764021
Cilium and associated proteins [BR:
tcz03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
108764021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_RIG_2nd
TPR_12
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
DUF4363
Beta-prop_WDR35_TULP_N
TPR_COPA_B
ANAPC3
Hira
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PPR_long
EIF3I
TPR_GEMI5
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
108764021
NCBI-ProteinID:
XP_018367510
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MTLYFDIRVQNPESASISTLATWHNNYPLLAVAAYSQDKGGFVIIYDDQGELVQDVESPG
HTVAQVTSLGWHPEKTWLAAGWENGDLRVWPGDTGTQEFNVIVTPHRDIITILQWSQYGG
CLVSADTGGSIVGWKIDSRGQLFMTFHHELKESFSQIAFRTVPPKPVVDISGLAKATVTG
DERALDMFSSWRPRTAAPTAVPVQRDNHSFYIGTVNGIIYFVDVQGQCKEVLSTDGAVLH
CLLYHQNRDSIIVMTEGLNIGHFQADSITGELTELTKVKLSGRSDTSRITSTTLCWISRN
TLAVLTGELAVRCWDIHTGDTYILSPPDSSNGNVATPQEICTSLAFCKANDTLAAGTNLG
TIYLWKRKCVLDCDENSWPNIPESCAIHGTVKQLEWGVSLSRNSLLAVNCITNVFILHQQ
PMCAVYNDGVCASQLTPTQILLEMDEQTYILKTEIQVQIIAVSKEYIVVSSGRQIVVNCI
NKGANLNTNVLTTFNCDTEKILIYEHTLIVLTPTIIQLRSIEGSIIQTLPTLPEEGEPIT
MELTGHYLTVASLNGILKIWNLSKHEAKLHTRAMATYEAISDFAEIIEARCNSDCRCVSI
TVAMANLMPSSILYVWDIESDQIYEFDFGESDNIVDDDAMLAAQCKGRLVTAHCWDVEDP
RLLVCRAQKLEKRDSKNFNKDNDWIVQTSVVLVSLYATSDHGIVVQDVKPIADENCRLLG
VHSPHIIILNSEKSLDKCSKIMQLLMRDFEELGECDSITRKAVMDFSFHISVANMEEAFK
AIKSIKNEAVWKSLAKMCVKTKQLNMALLCLGHMKQANAARALREAMQDDTLSLEAQVGI
LAVELGLHTDAEHLFREAKRLDLLGRLYEGRNKFKEAIELASNENKIREKTSYYNYARAL
EQQDKVAEAIDMYTKADCHRFEVPRMLLMRPRELLTYLNNSEEPEIKNWHAQYTESTGDM
ETALHLYEQAKDTLSMTRLLCYFGRENEVCELVTRTNHSAAAYHLAAHYESKNNMVQAIH
FYTIARAYTNAIRLCKEHNMLEELWPLTILAPRNSQIDVAKFYENNDQPDRAVLLYHKAG
LLHKALDVAFRTRQYSALQLIIMDVNADSDPALIHKCADYFMQNDQIDKAVDLLATGRDY
MAALDLIQQHNVVLSEELAEKLTIEKGSDDDAERERMRISTLEKIAEITFDQGNYHLATK
KFTQAGNKLRAMKALLKSGDTEKICFFAQVSRNREIYIMAGNYLQSLDWQNQPEILKNII
NFYSRGKAMDLLANFYVACAQVEIDEFQNYEKALDALNQANRCLSKVVTPRDPDVHKRAI
ELVNNRMSAIKRYLDIKSRLFDRGETETAMQQVRHLLDSQGPNLEQSVRRGDLFATITQH
YANIGDTEKAWATIEELKRLVPGINLTYYFNINLLEALGYKMKVQRQDSSDKDDGIEELL
GE
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtattttgacatacgggtgcaaaatcctgaaagtgcttcaataagcactctt
gcaacttggcacaataactatcctttattagctgttgctgcgtattctcaagacaaaggt
ggctttgtaatcatctatgatgatcaaggtgaactcgtgcaggatgtcgaatcaccggga
cacacagtggcacaagtcacctctcttggctggcatccagagaagacgtggctagcggca
ggatgggaaaacggagatttacgagtatggccaggggacactggaactcaggagttcaat
gtaatagtaacccctcatcgagatatcatcacaattctgcaatggagccagtatggtggt
tgcttagtatctgcagatactggtggatctatagttggatggaagatagactccagagga
cagctattcatgacatttcatcatgaactaaaagaatctttttcacaaattgcatttagg
acagttccaccaaaaccagttgttgatattagtggtttggcaaaggcaacagtgactggt
gatgagagagccttggatatgttcagttcctggcgtccaagaacagctgcaccaacagca
gttccagtacaacgggacaatcattcattttatattggcactgtaaatggtatcatatac
tttgttgacgttcaaggacaatgcaaggaagttcttagtactgatggtgcagtgttgcac
tgcttattgtatcatcaaaacagagattctatcattgttatgacagaaggattgaacatc
gggcactttcaagcagattcaatcactggagagctcaccgaattgacaaaggtaaaacta
agtggcagaagtgatacatcacgtatcactagtaccactttatgttggattagcagaaac
acgttggccgtgctcacaggagagctcgctgtacggtgctgggatattcacacaggcgat
acatacatcctgtcgcctccggattcatccaatggaaatgtcgccactcctcaggaaata
tgtactagcttggcattttgcaaggcaaatgacactttggccgccggcaccaatctaggt
acaatctacttatggaagcgaaaatgtgtgcttgattgcgatgagaattcttggccgaat
atcccagagtcctgcgcgattcacggcacagtaaagcaactggaatggggtgttagttta
tcacggaattctctcctggctgttaactgtatcaccaatgtattcatcttgcatcaacag
ccaatgtgcgccgtgtacaatgatggtgtttgcgcgagccagctcactccgacacagatt
ctactcgagatggatgaacagacgtatattctaaaaacggagattcaagtgcagattatc
gctgtatcaaaagaatacatcgttgtctcttctggaagacaaattgttgtcaattgtatt
aataaaggtgccaatcttaatacgaatgtattgacaaccttcaactgcgatacggaaaag
atattgatctacgaacacacattgatcgtgttgactccaacgatcattcagttgagatcc
atagaaggatctattattcagacacttcccactttaccggaggagggcgaaccaatcaca
atggaattgacagggcattatttaactgtagcatcattaaacggcattttgaagatttgg
aatctgagcaaacacgaggctaagctacacacccgcgccatggcgacatatgaggcgatt
agcgattttgctgaaatcattgaagcaagatgtaattcggattgccgttgcgtttcaatc
actgttgctatggcaaatcttatgcccagttcgattttatacgtttgggatattgaaagc
gatcagatttatgaatttgacttcggagagtcagacaacatcgttgatgatgacgctatg
ttagcagcacaatgcaaaggaagattggtaacagcgcattgctgggatgttgaggatccc
aggctactagtatgtcgagctcaaaaattagaaaaacgtgattctaagaacttcaataag
gacaatgattggattgtacaaacctctgtagtgctggtatcgttatatgcgacatcggat
cacggtatcgttgtacaggatgtgaagccaattgctgatgagaattgccgattgttaggt
gtacactcgccacatatcattattttaaattccgaaaagagcttggataaatgtagcaag
attatgcagttattaatgagagactttgaggaactaggagagtgcgattctatcaccagg
aaagcagtgatggatttcagtttccatattagtgtggcgaacatggaggaagcctttaaa
gccattaaatctataaagaacgaagctgtctggaagagtctggccaagatgtgtgtgaaa
acaaagcaactgaacatggctcttctttgcctaggtcacatgaagcaagctaatgctgca
cgggcattacgtgaagcaatgcaagatgatactctaagcttggaagcacaagtaggaatt
ttagctgtcgaacttggccttcatactgatgctgaacatctatttcgagaagcgaagcgt
ctagatctgctaggacggctatacgaagggcggaataagtttaaagaggcaatcgaatta
gctagtaacgagaataaaatccgtgaaaaaacaagttactataattatgctcgtgcgttg
gagcagcaagataaagtggcagaagctatcgatatgtacacgaaagccgattgccatcga
tttgaagtgcctagaatgcttttgatgagaccccgagagttactcacgtatctgaataat
tccgaagaaccggagattaaaaattggcatgctcagtacactgagtcgaccggcgatatg
gagaccgctttacatctttatgagcaagcaaaggacactttgtcgatgacaaggttgctt
tgttattttggtagagagaatgaagtgtgtgagctagtaactagaacaaatcactctgca
gcggcatatcatcttgctgcgcattatgaatcgaagaataatatggtacaggcgattcat
ttctatacgattgctagagcttatactaatgcaatacggctatgtaaggagcacaacatg
ctggaagaactgtggccactgactatattagcgccacggaactcgcagatagacgtcgcc
aaattttatgaaaacaatgatcaacccgatcgtgcagtactgttataccataaagctggt
ctcttgcataaagctttagacgtcgcgttcagaacgcgacagtacagcgcattgcaattg
attatcatggacgtaaatgcagattctgatccggcattaattcacaagtgcgccgattat
ttcatgcagaacgaccaaatcgataaggcagtggatttactcgcgaccggtagagactat
atggcggctttggatctaatccagcaacataatgtcgtactaagcgaagagctcgcagag
aagctgacgattgaaaaagggagcgacgacgacgcagagcgcgagcgtatgagaatttct
acgcttgagaaaatcgcagagatcaccttcgatcagggaaattatcatcttgcaactaag
aaattcacgcaagctggcaacaagttacgcgccatgaaagcattgcttaaatccggagac
actgaaaaaatctgctttttcgcgcaggtttcaaggaaccgcgagatctacatcatggcg
ggcaattatttgcaatctttggattggcaaaatcaaccagagattctaaaaaatataatt
aatttctactccaggggcaaagccatggatttattggcgaatttttatgtggcatgcgcg
caagtggagatcgatgagtttcagaattatgaaaaagcattggacgcactaaaccaagca
aacaggtgtttatccaaggtggtgacgccgcgagatccggatgttcacaagcgggcaata
gagctggtaaacaataggatgtcggcaattaaacgctatttggatattaaaagcagattg
tttgatagaggtgagacagaaacggcaatgcaacaagttcgtcatctgctcgactctcaa
ggacctaatttagaacagtcagtgcgtcgtggcgatctgttcgcaacgattacacagcat
tacgccaatataggggacacagagaaagcttgggcgactatcgaagaactaaaacgccta
gtaccaggaatcaatttgacctactattttaatataaatcttctagaagcactgggctat
aaaatgaaagtgcagcggcaggacagttccgacaaggatgatggaatcgaagagctcctg
ggagagtaa
DBGET
integrated database retrieval system
