Trachymyrmex cornetzi: 108764144
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Entry
108764144 CDS
T11212
Name
(RefSeq) protein patched homolog 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tcz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108764144
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108764144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcz02000
]
108764144
Transporters [BR:
tcz02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
108764144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
DUF5481
Motif
Other DBs
NCBI-GeneID:
108764144
NCBI-ProteinID:
XP_018367720
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MAKEEMELHEDRVKIQSCRRFWHSLPERISRTVEHLFYQLGVHIAQSPYKWMLGCLVVVL
VCVLGLFRFRQEKNPIKLWVPPDSDFVTTTEWLMSHYLETLRIQTFILTDDNVLEQQTLI
RLNEITKQMISTQTPIENISWTNVCMKIPVISGVTKRNKRQSSLFEDDFFDDDLSSKVNK
TFEPAIHVDSNLYCSIIESLPMSCLLFSILDIWDFDSAKIEKDSTEDIITKVNTVKVSPT
LGHAMNFSHLLGDVTLDESGRIIAAGAVRTDLMVHVSFLNVDMDKIGNNAGTADWATEDV
LKWESAYLENIQNLSYQLQSERNNSLMLYYEAGRSFGDISGSSMFQDIDKLIVGILLMFL
YVLMILSNRNWVEWRFCLTSTGLLCVGAAFILAVGVCSLIGIPYGPVHTSLPFMLLGLGI
DDIFVINASWKQIHTDKSNLNKPLTERIGLTLGHAGSAISITSLTDVVAFIIGASTILPS
LQSFCIYAAVGVFVTFLLQITFFIACFTLDARRMERKRNGMFPCITHENFTPKLSDVSSA
VSWKFINFFYSRIVLTTPGKIIIVLITFVTMSTSIMGLLRLQQWFDPKWLLPKDSYLYHY
IAIRTQTFPNQGYEAFVLMGDDINYSSEFSKIISLTERFQNASFIQNIESWPTEFAKFVS
LYYDTDLKSTKLTDDKFHYYLSKFLVSRAGGKYQRNFFFKEKFKCGKNAPQIAVATIEFY
FKQFEGPDEWVPAMDNSKLLTNEAQIHGYVTVWCKMFGPWTADKLISQELSRNIILALIC
VMGTTAILIAEMQTCFWILLCVLLTLLNVCGFMYFWGLTIDVVSCIGLELGVGLSVDYAA
HVAHAFLNAESREDDVNARKTRTLVAVRHIGAAVAYGAGSTFLAVSMLAFSSSYVFMAFF
RIFYLVILFGLWNGLILLPVVLSSIGPQSLRVTQKPQPMSEKAISVIDDED
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaagaaatggagctgcacgaagatcgggttaaaatacaatcgtgtcgcaga
ttctggcacagtctaccagaacgcatatccaggacggtagaacatttgttctatcagctt
ggagtacacatcgctcaaagtccatacaaatggatgctcggatgtcttgtggtagtatta
gtgtgtgtcctaggcctgtttcgtttccgacaggaaaagaatcccatcaaactttgggtt
ccaccagattctgattttgtgacgactactgaatggctaatgtcacattacttagaaact
ctgcgaattcaaacgtttattttaactgacgacaatgttttagaacagcaaacgcttatt
aggttaaatgaaatcactaaacaaatgatttctactcagacaccgattgagaacatttct
tggacaaatgtctgtatgaagattcctgttatctctggtgttacaaaaagaaataagaga
caaagttctcttttcgaagacgatttttttgacgacgatctctcttctaaagttaataaa
acctttgaacctgccattcatgtcgatagtaatttatattgtagtataattgagagctta
cctatgagttgccttttgtttagtatcttagatatatgggattttgatagcgctaaaatt
gaaaaagattccacagaagatattattacaaaggtaaatacagtaaaagtgagtcccaca
ttgggtcacgccatgaatttcagtcatcttctgggagacgtaactctagatgaaagcggt
aggattattgctgcgggagctgtacggactgatctgatggttcatgttagttttctcaat
gtggacatggataaaattggaaacaatgcgggaactgctgattgggctacagaagatgta
ttgaaatgggaatcagcttatctggaaaatatacaaaatctttcgtatcaactgcaaagc
gaaagaaataattctttgatgctttattacgaagctggtagaagcttcggagacatttct
ggttcatctatgtttcaagatatagataaattaattgtaggaattttattaatgttccta
tacgtcttaatgattttgtcgaatcgtaattgggtggaatggcggttttgtcttactagt
accggtcttttatgcgtgggtgctgcatttatacttgcggtgggagtatgctctctaata
ggaatcccatatggtccagtgcacacttcgttgccatttatgctcttgggtttagggatt
gatgatattttcgtaattaatgcatcttggaagcagatacataccgataaatcaaattta
aataagccattaacagaaagaattgggcttacgttaggtcatgccggttctgctatcagt
attacttcgcttaccgatgtcgtggcattcatcattggtgcttctacaatattgccatca
cttcagtcattttgtatctatgctgcagtgggtgtatttgtgacatttttattacaaatt
acattttttattgcctgttttactttggatgctagaagaatggaacgaaaacgaaatggg
atgtttccgtgtatcacgcatgaaaactttacgcccaaattatcagacgtgagcagtgca
gtctcttggaaatttataaacttcttctactcgcggatagtcttaaccacacctgggaaa
attattattgtattaattactttcgtaacgatgtctacaagtattatgggcttgcttagg
ttgcaacaatggtttgatccaaaatggttattaccgaaagattcgtatttgtatcactat
atagctatccgaactcaaacatttcccaatcaaggatatgaggccttcgtccttatggga
gatgatattaattattcttctgaattttctaagataatatctttgacagaacgctttcaa
aatgcatcttttatacaaaatatagaatcttggccaactgagttcgcaaaattcgtatca
ctatattatgacacagatttaaaatctacaaaacttacagacgacaagtttcattattat
ctatcgaaatttcttgttagtcgagctggtggcaaatatcagagaaatttctttttcaaa
gagaagtttaaatgcgggaagaatgccccacaaatcgcagtagcaaccattgagttctac
ttcaaacaatttgaaggtcctgacgaatgggttccagcgatggataatagtaagcttcta
acaaacgaagcgcaaattcacggatacgtgacagtgtggtgcaaaatgttcggaccttgg
actgctgataaattaatcagtcaagaactatcacgaaacattatcctggcattaatctgt
gttatgggtaccacagcgattctcattgctgaaatgcagacttgtttttggatcttactt
tgtgtacttctcacattgctaaatgtttgcggcttcatgtatttttggggattaacaata
gatgtggtgtcctgcattggtctcgagctgggcgtcggtttgagtgtggattatgccgca
catgttgcacatgctttcctgaatgctgagtcgcgagaggatgatgttaatgctcgtaag
acccgaacattggtcgcagtcaggcatatcggtgcagcggtcgcatatggtgcaggttca
acatttctcgccgtttcgatgctggccttctcgtcgtcctacgtgttcatggcctttttt
cgaatattttacttggtaattttgttcggactgtggaacggattgatcctactaccggtc
gtgttaagcagtattgggccgcaaagtttacgtgtgacacaaaagccacaacccatgtcc
gaaaaagccatttctgtgattgatgatgaagattga
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