Trachymyrmex cornetzi: 108764627
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Entry
108764627 CDS
T11212
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcz03000
]
108764627
Transcription factors [BR:
tcz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108764627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
108764627
NCBI-ProteinID:
XP_018368452
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MVNGGEQLSSAVTHLSIVLLVIVIKHNALRDESLNHGSKIDLDLHQRAAGHFMRAGGNMC
DGAFTETLRSMQGMTGTSPPGSAGVGHMGVGLMGGSSPLGSAGKKVPVEHIKRPMNAFMV
WSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEHPDYKY
RPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGSMGQAAMGSYYTPAAIPVDSMTMKYS
MEPDKYRAAYMPPSTLAMSMYPDPKYLDSSNPKTYLDRTYLDAKAYFEQSKLYMDQKPTI
GEYNRPNYEPNKLYEESSPSSVVGGNGPARSPPAESPDTSKQHERTEQGSSSASSTSTSS
AASPGALPYPYPASVQASGLLTPQMAQYGGYQMAPASGNESFRRPLVIL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacggtggtgagcaattgagcagtgcagtgacccacctctcaattgttctccta
gtgattgttatcaaacacaacgctttgcgagacgagagtctcaatcacggcagcaaaatt
gatctggacttgcaccaacgagccgccggccactttatgagagccggcggcaacatgtgc
gacggcgccttcacagaaaccttgcgtagtatgcaagggatgacgggtacgtcgccaccg
ggtagtgccggtgtcggtcacatgggggtcggcctcatgggggggagtagtccgctcggc
tcggcaggcaagaaggtgccggtggaacacatcaaacggccaatgaacgccttcatggtg
tggtcacgactacaacgacggaagattgcacaagagaacccgaaaatgcacaacagtgaa
atctctaagcggctaggtgcagaatggaagctccttacggaggatgagaaacgcccgttc
atcgatcaggcgaagaggttacgtgcacaacacatgaaggaacatcctgattataagtac
agaccgcgaaggaaacccaaaactttgcgaaaagaaggctatccttatagtattccatac
ccaagtgttcccatggacgctcttcgagcaggaatggccggtagcatgggacaagctgca
atgggctcctattacacccccgccgcgataccggtggactcgatgaccatgaaatattct
atggagcccgacaaatatcgcgctgcctatatgccgcccagcactctggcaatgagcatg
tatccagatcctaagtacttggattcttctaatcccaagacttatctggaccgtacttac
ttagacgcgaaggcatacttcgagcaatcgaagctgtacatggatcagaaacccaccatt
ggagaatacaatcggccgaactacgagcccaacaagctttatgaggaatccagcccaagt
agtgtcgtcggcggaaacggacccgcaagatcaccgcccgcggaatcgccagacacaagc
aagcaacacgaaagaacagaacaaggttcgtccagcgcgagttcgacatcgacatcatcg
gccgcgagtcccggcgctttgccgtatccgtatcccgcatcagtccaagctagcggcctg
ctgactccgcagatggctcaatacggtggataccaaatggcaccggcatcgggaaatgaa
tcttttcgacgtccgttggtcatcttgtga
DBGET
integrated database retrieval system
