Trachymyrmex cornetzi: 108765296
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Entry
108765296 CDS
T11212
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108765296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108765296
03016 Transfer RNA biogenesis [BR:
tcz03016
]
108765296
03029 Mitochondrial biogenesis [BR:
tcz03029
]
108765296
Enzymes [BR:
tcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108765296
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108765296
Transfer RNA biogenesis [BR:
tcz03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108765296
Mitochondrial biogenesis [BR:
tcz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108765296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
108765296
NCBI-ProteinID:
XP_018369447
UniProt:
A0A195DRN9
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MKKKQFDEFLGEFQSLPHEVSIMNFVSSRAHEISAMTSSIENPKQTKLIFQKLPIYMRRR
VMSHNVKRLPRRLREAHLAQMAKSGNGKDLPSTNKRLSRKYRRRPRNLLSEYNHRQRDKI
WLETHIWHAKRFYMIDKWGYRIASHSNDKCFRANYRAATKYCLLQDISYYTCIEITGEEK
SLKTTLKTHCNTSMLTFTAKKYINGHREGTLMFYKKNGYPQFPIGNVDFFWQPNKSDVQT
NVRTIWIWVHPAFYDDFLNEIISSFEFKQNNVEQDVASTIHNLNCLYTNNVGCTMIILRN
ALNRFRLRGALTLNVLTKALQLPSLNKLDFCTDYTILKDNDNSLRSKISIDNVQSTEKKV
IDKINEDITISKYLNTELGKNTWYINYYKKEENKEAFKVQEQLWQILMSLGSPNYLATNM
IIGVTILDPRFYLPEKRTKCNTEITETFSRSILVDQLVTNSNYSPIWDSEIRRIVSSSCM
PTDIINKLRSECLVPGVSNDQYYTEDIMAKIPILLIQKPGTITGLDSGIDVVVPARWAMP
FWLAFLMQCARAGGLQESRSIAFESLNPNTPDVNDPDSPAYIREALITKEQLTKKYFRCP
PNRRINFVKFGIRSPFFCDWKNLMKNWSGNEDFYVLRNREILLLLQAGICPAKNKNAKFL
ARNTQSNFPNLDDYKNCLIHVHISIVGKGSPKKFAIICMPTFEDLNRIKTNKKWFGPVEK
CHNDPNEKIRKALRKNHLIILKRLRRQRVRRKQVLKNNALKLLKEPDKLNENERTIVSSH
RKIISDQLVKMSELYLPKSAEVRHSCDREVMGYITLGNFSFSQAKGIGIGYITLISLLGM
INEKSNIVLVRNPQTRQYRLAELNILV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaacaatttgatgagttcttgggagaatttcagtcactcccacatgaggtg
tctattatgaactttgtctcttcacgagctcatgaaatttctgcgatgacatcttcaata
gaaaatcctaaacagaccaagttaatatttcaaaaacttccaatatatatgcgtagacgt
gtcatgtctcataatgtcaaaagattgccacgtagactgcgagaggcacatttggcacaa
atggcaaaatcaggaaatggcaaagatttaccatccacaaacaaacgattgtctcgaaag
tatcgtagaagaccacgcaatttactttccgaatataatcacagacaacgcgataaaata
tggttagaaacgcatatctggcatgcaaaacgtttttacatgattgacaaatggggatat
agaattgctagtcattcaaatgataaatgttttagagctaattatcgagccgctacaaaa
tattgtctcctacaagatatttcttattatacttgtattgaaataacaggagaagaaaaa
tcattaaagactactttgaaaacacattgtaacacatcaatgttaactttcacagcgaaa
aaatatattaatggtcatagagaaggtactttaatgttttataagaaaaatggttatcca
caatttcctattggtaatgtggattttttctggcaaccaaacaaatcagacgtccaaaca
aatgttagaactatttggatctgggtacatcctgctttttatgacgattttcttaatgaa
attatatcaagttttgaatttaagcagaataatgttgaacaagatgtagctagtactatc
cataacttgaactgtttgtacacaaataatgtaggttgtacaatgattatattaagaaat
gcattaaatagatttcggcttcgtggggcattgactctaaatgtactaacgaaagcatta
caattgccatccttaaataaattagatttttgtacagattacactattctgaaagataat
gacaactcattaaggagtaaaatatcaatagataatgtacaatctacagagaaaaaagtg
attgataaaataaatgaagatattacgatttctaaatatctaaatacagaacttggtaaa
aatacatggtatattaattactataaaaaagaagaaaataaggaggctttcaaggtgcaa
gaacaattatggcaaatactgatgtctttgggatcaccaaattacttggcaacaaatatg
attattggagtaactattttagatccccgcttctatttacctgagaagagaacaaaatgt
aataccgaaataacagaaacattttctcgatcgattctagttgatcaactagtaactaat
tctaactattctccaatttgggattcagaaatacgtcgtattgtaagcagttcttgtatg
cctacagacattattaacaaactcagaagtgaatgtcttgtgcccggtgtctcaaacgat
caatattatactgaggacattatggcaaagatacctatacttcttattcagaagccggga
actatcacaggtttagattctggcatagatgttgttgtaccagctagatgggcaatgcca
ttttggcttgcatttttaatgcaatgtgcaagagcaggtggacttcaagaatcaagatcg
atagcttttgaaagtttgaatccaaatacacctgatgtcaatgatcctgacagtcctgcc
tacataagagaagcattaattacaaaggaacaattgactaaaaaatatttccgttgccca
ccaaatagaagaattaattttgtcaagtttggaattcgtagtcctttcttttgcgattgg
aaaaatttgatgaaaaactggtcgggcaacgaagatttttatgttctaagaaatcgcgaa
atcttgctacttttacaagcaggtatttgtcctgccaaaaataaaaatgcaaaatttctt
gctcgaaatacgcaatctaattttccaaatttagacgattataaaaattgtttaatacat
gttcatatatctatagtgggaaaaggatcgccgaaaaaatttgctatcatatgcatgccg
acattcgaagatttgaacaggattaaaactaataagaaatggtttggacctgtagaaaaa
tgtcataacgatccaaacgaaaaaattcgtaaagcattacgaaaaaatcatttgataata
ttaaaacgactaagacgacaaagagttcgacggaagcaagtgttgaaaaacaatgcgtta
aagttactaaaggaaccggacaagttaaacgaaaatgaacgtacaatcgtttcatcgcat
cgtaaaattatatctgatcaactggtaaaaatgtctgaattatatcttccaaaaagtgca
gaagttcgtcattcttgcgatagagaagttatgggatatataacactagggaacttttca
tttagtcaagcaaaaggtattggtatcggatatatcacattaatctcattactcggaatg
attaacgaaaaatctaacatcgttcttgtcagaaatcctcaaacacgacaatacagatta
gcagaattaaatatattagtttga
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