KEGG   Trachymyrmex cornetzi: 108765515
Entry
108765515         CDS       T11212                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
tcz  Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:tcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tcz03009]
    108765515
Ribosome biogenesis [BR:tcz03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108765515
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IP5PC_F Cytochrom_D1 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Lactonase Beta-prop_WDR35_TULP_N WD40_like Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108765515
NCBI-ProteinID: XP_018369776
LinkDB
Position
Unknown
AA seq 465 aa
MSFFIRSGNRGNGTQKRKLNGHFNKKSTAQSKLKKLKKSELDDNESIASTDEEFAEENLR
NEAQSETEEEEETAQEKRLRLAKKYLQEIEEEEKDRAEFEEGAVAQRLREEYLEEKGRLK
KNIATYYTGHNHLITLRCKEHKTSITCICLSSDGSILYTGSKDGSLVKWSVKEKTKLKAI
RGNRGKKNPGMKSIRCLAISTDGRFLVVGESGCKDIKVFSGDTLNHIKDLKGHRGLVSGL
VFRKDTHTLYSASEDKSVKVWNLDDMAYVESLFGHQNAITSIDALSRERAITSGGYDRTI
RIWKVVEESQLIFNSSSVGNSIDAVKLINEENFFTGGDDGQLCIWGCLKKKPLCSVPQAH
GLDEINGQPMWISSIATLLNTDLVASGSWNGTIKLWHCSDNFRSLNLLFEVKLTGFINAL
AFTPDGNHLIAGVGKEHKNGSWWQISEARNSIVIIPLVHKQKTNK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtcattttttataagaagtgggaatcgaggaaatggtacacagaagcgtaaactcaat
ggccactttaataagaaatctacagctcagtcaaaattaaagaaattaaagaagtccgaa
cttgatgacaatgagagtattgccagtacagatgaagaatttgcagaagaaaatttaaga
aatgaagcacaaagtgaaactgaggaagaagaggaaactgcacaagaaaaacgtttgagg
cttgcaaaaaaataccttcaagaaattgaagaagaagaaaaagatagagcagaatttgaa
gaaggtgcagtcgcgcagagattacgtgaggaatatttagaagaaaaaggtcgattaaaa
aaaaatatagcaacatattatactggccataatcaccttataacattgaggtgtaaagaa
cataaaacctccattacctgtatctgcctttcaagcgatggcagtatattatatacagga
tctaaggatggcagtttagtcaagtggtcagtaaaggaaaagacgaaattaaaagccatc
agaggaaacagaggaaagaaaaatcctggaatgaaatccatacgatgtttggcgattagc
acggatggaaggtttcttgtagtaggagagagtggatgtaaagacataaaagtattctct
ggtgatactcttaatcatataaaggatctaaaaggtcacagaggtttagtatctggattg
gtattccgtaaagatactcacacgttatactccgcttccgaagataagagcgtgaaagtt
tggaatctagacgatatggcttatgttgaatctttattcgggcatcagaacgctatcacc
tctattgacgcgctttcacgagagcgtgctatcacaagcggtggttacgacagaaccatc
agaatttggaaagtagtagaagaatcgcaattaatatttaactccagtagcgtcggcaat
agcattgacgcggtcaaacttatcaacgaagaaaatttttttactggtggagatgacgga
caactttgcatttgggggtgtttaaagaagaagccgctgtgttcggtgccgcaggcacac
ggtctggatgaaatcaatggtcaaccgatgtggatttcaagtatcgccacactattaaat
acagatttagtagcatcaggatcatggaatggtacgatcaagttatggcactgtagtgac
aactttagatctttaaatttattgtttgaagttaaattgacgggtttcataaacgcgcta
gcatttactcctgatggaaatcaccttattgctggtgtaggtaaagaacataaaaacggt
agttggtggcaaatatctgaagcaaggaattctattgttattataccattagtgcataag
caaaagacaaataaataa

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