Trachymyrmex cornetzi: 108766134
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Entry
108766134 CDS
T11212
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108766134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108766134
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108766134
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108766134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
108766134
NCBI-ProteinID:
XP_018370729
UniProt:
A0A195DMU1
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSSVTSNVPQTIAQQHNNNPAPAQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGSM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNNNATSEAHIPPLLGVAPLGPVP
LQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggaa
ggtgtggaaacctttgaagatatttggcaaaaagttcataatgccacgaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcatcgggtgaaataaaggataagagtacgcttctggactat
cggaagttgattgagactcaaatggaaagatttaaagttgtagaaagagagacaaaaaca
aaagcttattctaaagaaggtttaggcgctgctcagaaattggacccagctcagaaggag
aaagatgaggttactaattggcttgccaattccatagatgctctcaatctacagatggat
acatttgaatcggaaatagaatctttacaagcgggaaagaagaaaaggatagacaaagat
aagcaagatagggtggatgaattgaaggcaaagctcgacaaacaccgctaccatatccgt
aaattggagacattattacgtatgcttgataatatgtctgtcgaagtcaatacaatcaag
aggataaaggacgatgttgagtattatatcgaatcttcgcaagatcccgattttgaggaa
aacgaatatatttacgatgatattatcggccttgatgaagttgagttgtcaggagttggc
atcccctcatcagcaacaacagatagtaacaacagcaatgaaaccggaggaacgccaact
tcaactaattcctgtacttcgcctataccatcgccgtcgttgagctccactatgcataac
cattcgagcgatagttctacagataatgacaagaaaaccaagcctgtgaaaccaacagca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaatgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaacaaaacatctact
cacaacagtgagaataatatcttatcatcatcatctacgtccagtgttacgtcgaatgtg
ccgcaaacgattgcgcaacagcacaataataatccggcaccggcacagacgacgcacgta
ctgcatagtcaacagagtcagaatcacaatagtgaaacggaaatgactacaccgataccg
ccatcttcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatggaagcatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccacct
tccgagccgaatagaaacatctttgacagtgccaagacgagcaacagtagcaacaacaat
gccacgtcggaagcacacattcctccgctgcttggggtcgcgcccttggggcctgtacca
ttacagaaggagcaccagttgcagttccaaatgatggaagccgcctactatcatatgccg
catccgtctgactcggaaagattacgttcgtatttgccgagaaatacatgcaccacgcca
ccttattatcagcaggttcagcttcctcattcggatactgtggagttcttccaacgcctt
tctacggaaactttgttcttcatattttattatatggagggatctaaggggcagtattta
gcagcaaaggctttgaagaaacaaagttggaggtttcacaccaagtatatgatgtggttc
cagaggcatgaggaaccgaaaattattaacgaggaatacgagcagggaacgtacatctat
tttgactacgaaaaatgggggcagaggaaaaaagaaggatttacttttgaatacaagtac
ttagaggacagagatctgaactaa
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