Trachymyrmex cornetzi: 108766166
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Entry
108766166 CDS
T11212
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03015
mRNA surveillance pathway
tcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108766166
09123 Folding, sorting and degradation
03018 RNA degradation
108766166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108766166
03041 Spliceosome [BR:
tcz03041
]
108766166
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108766166
mRNA cycle factors
Stress granule specific factors
108766166
Spliceosome [BR:
tcz03041
]
Complex C
Other components
Complex C specific factors
108766166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RBD_DEAH11
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
108766166
NCBI-ProteinID:
XP_018370803
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNPGAPNYPMASLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVTQDESGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGKFIPRKER
QKELGEKAKLFTNVYVKNFGEDMSDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPNSAEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQMGQIFHQPGNAGSYFVPTLPQPQRF
YGPAQMAQIRATPRWPAQPNQVRPNAQTGNSGFASMQAAPFRAAPRAPAAQAGALRNNMS
ARPITGLQAVSNNMQSRSMAGPAVGVSPGQSRPSNYKYTANMRNPPQTAMALPTPSGPSM
QQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIHDMNPQLTGKITGMLLEIDNSEL
LHMLEHKESLKAKVDEAVAVLQAHQAKQAVAPKKE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggagcacccaattaccccatggcttcgctctatgtaggcaatctgcacacc
gacatcaccgaggcgatgctgttcgagaagttctcgacggctggacccgtgctgtcgatt
cgcgtatgccgcgacatgattacccgccgctcgctcggctacgcatatgtcaactttcag
caaccagccgatgctgaacgcgcccttgatactatgaacttcgacattataaaagggcgg
cctatcaggattatgtggtcccagcgcgatccctccttacgcaagtcaggcgttggaaat
gtatttatcaagaacttagataaaaacatagacaataaagcgatgtacgatacattttcg
gcgttcggtaatatactgagttgcaaggttacgcaagacgaatcaggcgcatcaaagggt
tacggctttgtccattttgaaacagaggaagcggctaacaaatctattgaaaaagtcaat
ggaatgttgctaaatggcaagaaggtgtatgtcggtaaattcattccacgtaaggaacgc
caaaaggagttaggcgagaaggccaaactgttcacaaatgtctacgtaaagaactttggc
gaggatatgagcgacgataagctgaaagaaatgtttgaaaagtatgggaccattacaagc
cacaaagtgatgattaaagacgacggcaaatcacgtggcttcggatttgtcgcgttcgag
gacccaaactctgccgagcaggcggtgctcgatttgaacggtaaggagatcgccgagggc
aagtgtatgtacgttgggcgtgctcagaagaaagccgagcgtcaacaggagcttaaacgg
aaattcgagcaattgaaaatcgagcggctgaatcgatatcaaggtgtgaatttgtacgtg
aagaatctggatgatacgatcgacgacgagcgtctgcgtaaagaatttacgccgtttggc
acgatcacctcagcgaaggtgatgatggaggaaggacgtagcaagggttttggttttgtg
tgcttctcacagccagaggaagccaccaaggcagttaccgagatgaacggacgcatcgta
ggttccaaacccctctacgttgctctggcgcaacgtaaggaagatcgtaaggcacacctt
gcctctcaatatatgcaacgcatggcgaatatgcgcatgcagcagatgggtcaaatattc
catcaacctggtaacgccggtagttactttgtacctacactgccgcagccacagcgattc
tatggacccgcgcagatggcgcagattcgtgctactccacgctggccagcgcaaccaaat
caagtaagaccgaacgcgcagactggcaactctggattcgcgtcaatgcaagctgcacca
ttccgagcagcgccgcgagctcctgccgcacaggctggagccttacgtaataacatgtct
gccagacctatcacaggtctgcaagctgttagtaacaatatgcagagccgttccatggct
ggaccagccgttggtgtctcgcccggtcagagccgtccatcgaattacaaatacaccgca
aatatgcgcaaccctccacaaacggctatggctctacctacaccgagtggtccttctatg
cagcaggcggttcacatccagggtcaggaaccgctcactgcatcgatgctagctgcggca
ccaccgcaggaacaaaaacaaatgttaggagaacgtttattccctctgatccatgacatg
aatccacaactgaccggcaaaatcactggtatgttgctggagatcgataacagcgaactg
cttcatatgctggagcacaaggaatctctgaaggccaaggtcgatgaagccgtggctgta
ttacaggcccatcaagcaaaacaagccgtcgcgccgaagaaggaataa
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