Trachymyrmex cornetzi: 108766293
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Entry
108766293 CDS
T11212
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03018
RNA degradation
tcz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108766293
09123 Folding, sorting and degradation
03018 RNA degradation
108766293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108766293
03041 Spliceosome [BR:
tcz03041
]
108766293
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108766293
mRNA degradation factors
5'-3' decay
Lsm complex
108766293
Spliceosome [BR:
tcz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108766293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108766293
NCBI-ProteinID:
XP_018370983
UniProt:
A0A195DLT4
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDIQMKSRGRGEMKGRGQNQRGRGGGRGTFGRGGRGPAPL
GRGGSTQVGNKSQNKPRPK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctgactttactaaaaacagcgcaaaaccaccccatgttggtggagctgaaa
aatggggaaacttacaacggtcacttagtcagctgcgataactggatgaacataaacctc
agagaggttatatgtacgtcaagggatggtgacaaattctggagaatgcctgaatgctat
ataagaggcagcacaataaagtatctgaggatcccagatgaagtaatagatatggtaaaa
gaagatatacagatgaaatcaaggggacgcggcgagatgaagggtcggggccagaatcaa
agaggacgtggcggtggaagaggtacctttggcaggggaggaagaggtccagcaccattg
ggtcgtggaggtagcacacaagttggaaataaatcacaaaataaaccaagacctaaatga
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