Trachymyrmex cornetzi: 108766582
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Entry
108766582 CDS
T11212
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108766582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcz04131
]
108766582
Membrane trafficking [BR:
tcz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108766582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
WD40_CDC20-Fz
Beta-prop_WDR5
ANAPC4_WD40
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Prok-RING_1
zf_RING_Vps8_fungal
Beta-prop_IP5PC_F
Beta-prop_THOC3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_1st
Clathrin
Beta-prop_EML
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108766582
NCBI-ProteinID:
XP_018371471
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MAENEFVLDCDECLVAEAINLDIEELDNTEYAIPIVEELPTLESILMEPDYESLSETEDD
IGVSLGEKFGSSETTSIGSHLSLNSLNKSSKTAHKPYSGVILRHVILKGITSQIVSANER
VNAGLASAVAAGGNMLVIGTSHGLILGFDSSQTLRWCDQETRHQGSVSALCFNHDGSRVL
AGFVRGHILMLDSSNGKVLRILTDVHPLDTAVLHVKFTDSPKIALCSDSGGSVFELNFTR
VIGIRGCDSRCLFSGSKGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIIVCVRPRMR
VVLSHPLTGAAIAPPQLSWQLVIIQTADGSRVIDPVLALARDNVVYFYQVYTEIGTRVKL
SPLRRMTLPYMISNLRWLNPRSLVVLDTQEKLHLLDVRAQDNLETLDMSRVGISYASSHF
KGLSTGGNVSKAMALAGERACYNTVIVFGTQLLLLGTKSLHVICMRTWTERLQHLIVQKR
FPEALALGLSFYQDKGKAVIGLRGSKQRRKQIARDKVCEVLVQYMDELNQCLIDENTGYD
TIVLTCVDYCIQLENLDLLFGKLWDIVFESEGLKTSYLHALEAPLLDGSLQSRLPPLIAQ
QLVTLYDQEDKVDSLEAIVVLLNVDCLDIHQVTTICRQRGLWEALIYLQTTALGDFTAPI
HQLVPALQNLLQDPLAALSRDCIKLGNAILVYTSCCLAGRGFPKDELPEGVPQKAKADIL
RALLSQHSSLANDMERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRHRQRLIDI
LLGIVMSNTPLTPKNIDYITLEQQFMVLIFVANEVCESTVTLEYNTLNKMIDILCIDVHM
ELSKDFKTERENAVLGLLHSKKLCNISDNTLLNLANRANFIRVVELLYSAREDWVAVCEC
IILEPLRHHDVWPWLDHLSTASLDQVISVHTSTLLTINANQFATIVATRLQNKIDAILQS
LTDNVSLEYKLFGALYQIAQYKEEDVSLELTTEHLERYLALMCELEPARVVAHLHGPHGC
RLDEALKIVQKWNCKDAEAVMLEKLGNYQEAFDLLLKEFENRLEMYRQDKASESETMHAA
IQLAGICRRSAGNLDWMPLVEVMFRSHSENNRQKVDILNGKLLRLILESLSGTSILSNIL
EQILRNPSATSGTMGDIRQLLSGVLTQSRYEQTLVETTTRLVSLELHKALETSLRDAGRA
CGNVSITCPVCRQPLSHCSDHVVVFGCGHGYHLTCLGEPKSCYKCLNIKGWAPIATNVAH
SIAQPPLRKKQLLPPEFLHHKDLVLRLAPSCSIPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaatgaatttgtactggactgtgacgaatgtcttgttgcagaagctattaat
ttagatatcgaggagttagataacacagaatatgccataccaatcgtggaagaattaccc
accttagaaagtattttgatggagcctgattatgagtcactgtcagaaacggaggacgac
attggggtatcattaggagaaaaatttggcagcagcgagactactagcattggcagtcac
ttatcactgaattcattaaataaatcctccaagactgctcataaaccatattcgggtgtt
atcttaaggcatgtcatactcaaaggaataacatcacaaattgtatcagccaatgagcga
gtcaacgccggtttggctagtgcagtcgcagctggggggaatatgctggtaattggtacc
agtcatggtttaatactgggctttgattcttcgcaaacattgcgatggtgcgatcaggaa
acgagacatcaaggttctgtttctgctctttgcttcaaccatgatggtagcagagtgttg
gctggtttcgttagaggacatattttgatgttggatagcagtaatgggaaagttttaagg
attctcactgatgtacacccgctagacaccgctgtgttgcatgttaagtttacagattcg
ccaaaaatagctttgtgcagcgacagcggaggctccgtattcgagctgaatttcactaga
gtaataggtatccgaggatgcgacagtagatgtttgtttagtggttccaagggagaagtg
tgcactctagaacccttgctgttgaatcatttgccatcgcatccactaaaaaattataca
ttagtagcaatggcaacattatcgaaggtaattatagtctgcgtaagaccgcgaatgcgc
gttgtattgagtcacccgttgaccggtgccgcgatagcaccaccacaactatcttggcaa
ctagttatcatacaaacggctgatggttcccgtgtaattgatccagtattggcacttgcg
agggacaacgtggtgtatttttatcaagtgtacaccgaaattggtacgcgggtaaaattg
tctcctcttcgaaggatgacactaccgtatatgataagcaatttgaggtggttaaatccg
agatctctcgtggtattggatactcaagagaagttgcatttgttagatgtaagagcgcag
gataatttggagacattagacatgagtcgcgttggtatttcttatgcttctagtcatttt
aagggactatctactggcggaaatgtttctaaggcgatggcgttagccggtgaacgggca
tgctacaacaccgttatagtttttggtacgcagctgttgttattaggtacaaagagttta
catgtgatatgtatgagaacgtggactgaaagattgcaacatctgatcgtacagaaacgt
tttcccgaagcgttagcattgggtctttctttttatcaagacaaaggcaaggcggttatc
ggtttgcgaggttctaagcagcgtcgtaagcaaatagcacgtgataaagtttgtgaagta
ttggtgcagtatatggacgaattaaaccaatgtttgatagacgaaaatacaggttacgat
acgatagtactcacctgcgttgattactgcattcagctggaaaatctagatctgctgttc
ggaaagttgtgggatatagtttttgagtcggaagggctgaaaactagttatttgcatgct
ctcgaagctcctctgctagatggaagtcttcaatcgagattgccgccattaattgcccaa
caattggtaactctttatgatcaagaagataaagtagattcgctggaagcgattgtggtt
ttgctcaatgtggattgtctagatattcatcaagtaacgacaatttgtcgtcaacgagga
ctttgggaagcgctgatttatcttcagacaacagcgttgggcgattttacagcacctatt
catcaattggtgccagcacttcagaatttattacaggatccattagccgctctttcccga
gactgtataaaactcggcaacgccattctagtttatactagctgctgtctcgctggtcgt
ggatttcccaaggatgagctccctgaaggcgtgccacagaaagcgaaagcagacatattg
agagccctgttatctcagcattccagtttggcaaatgatatggagaggcaatatccatat
ttgagaacgttactgcaattcgatgcgaaaggctttctcgatgttattgccatcgccttt
caggaaccagaatttacctccgaaatgggtctccgacaccgacaaaggctcatagacatc
ttgttaggcattgttatgtcgaatacgccgcttactccgaaaaatattgattacatcacg
ctggagcaacaatttatggttcttatattcgtggcaaacgaagtgtgtgaaagcacagtt
acgttagagtataatacgttgaataaaatgatagatatattatgtattgacgtgcacatg
gaattgtcgaaggactttaagactgagagagaaaacgctgtgttgggattgttgcattct
aaaaagctgtgcaatatctctgataatactttattaaatttagcaaatagagcaaatttt
ataagagtcgtggaattactgtacagtgcacgagaagattgggtggcagtatgtgagtgc
ataattttggagccattgaggcatcacgatgtgtggccttggctcgaccatctgtcaact
gcttcgttagatcaagttatatcggttcacacttcaactcttctgacgatcaatgccaat
cagtttgctacgattgttgcaacacgattgcagaacaagattgatgcaatactacagagt
cttaccgataatgtaagcttagaatataagctgtttggagcattgtatcagatcgcgcaa
tacaaggaggaggatgtttctttggaattaacaactgaacacttggagaggtatttagcg
ttaatgtgcgaattggagccggcacgcgtagttgctcacttgcacggaccacacgggtgc
aggttggacgaggcgttaaagattgtccagaaatggaattgtaaagatgcagaggcggtt
atgctagagaagcttggtaattaccaggaagcgtttgatcttttgttgaaagagtttgag
aataggctggagatgtaccgacaagataaagcttcggaaagcgaaacgatgcacgccgcc
attcaacttgcggggatatgtaggagatctgcgggaaatctcgactggatgcccctagtg
gaagttatgtttcgatcgcattcagagaataacaggcagaaggtggatatattgaacggc
aaattattaagattaattctagaatctctgagcggtacatcgatattgtcgaacatattg
gagcagatcctgagaaatccatcagcaacgagcggaacaatgggtgacatacggcaacta
ctgtccggagtcctcactcaatcgcgatatgagcaaaccctagtcgaaactaccactcga
ttagtgagtttggagcttcataaggctctagaaacatctttgagggatgctggtagagca
tgcggcaacgtttctataacttgccccgtgtgcagacagccattgtcgcattgttctgat
cacgtggtggtatttggctgtggtcatgggtaccatttgacatgtctgggcgagcctaag
tcgtgttacaaatgcttgaatataaaaggatgggcgcccatcgctaccaacgttgcgcat
agtattgcgcagccaccactgagaaagaaacaacttcttccgccagaatttttacatcac
aaagaccttgtattaagactggccccatcctgttctattcctgatcttgagggtatcttt
taa
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