Trachymyrmex cornetzi: 108766884 Help Entry 108766884         CDS       T11212                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism tcz  Trachymyrmex cornetzi Pathway tcz04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tcz00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     108766884  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tcz00536]     108766884 Glycosaminoglycan binding proteins [BR:tcz00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108766884 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  108766884 NCBI-ProteinID:  XP_018371935 LinkDB All DBs Position Unknown AA seq 1702 aa AA seqDB search MRLLDHTRRQWRTLRSTWIMLLVHSLFLMVLILSGLQRNAVDAALQDASKNVTDIIEAMG MQEQLFGVRRTESRCRDDTIAYDIMEAAILMAPTNVLFPAGIPQDFSILVVAKPRANEST SKDYSTSVLFTIYGDSGEEQLILSLGRNIEFFYSTNPDNRNEPISFDVGISDGQWHRLGV SIKGDAVTIILDCNRHITKKLRKNVEKTIAGILMIGQQLKGDLYLGSLEMLKIALNPDAA YEICTTFAPDCERESRYGLNYNSSFNEDDYEEENESDSDEDDNRDFLPHGTITNTINVLT SATKNSTSYEVEITTMANVYNAESNHQQNYGESTNNPYDEEYIKRYNNRGSPGLRGFPGP PGVLGPPGEKGEPGRDGLPGLPGVSGPPGNVFVIPSLNQQGNEKGPDSQAEMLRQMISQH MLAMRGVEGPMGLTGVPGPDGPPGPQGQKGEPGEIGEPGLRGDQGSPGNPGREGRRGRPG RDGERGLSGLPGMKGEQGQIGLPGLPGDKGERGSSGKPGESGLPGHEGMQGEDGPPGLPG LPGELGPRGFIGPRGFAGLPGNPGIPGNEGPPGIKGNAGPLGPPGAPGQSGPTGSIGPPG PQGPLGPIGLVGPQGKPGIPGLSGADGSPGLPGNPGIPGTKGEQGPSGLQGPVGFPGVRG VKGDEGQRGVAGERGEKGDRGLEGEKGDTGAKGEPGATGPQGIPGLEGLEGSKGFEGLRG ETGPAGLPGEKGKVGLPGYVGYPGNPGEKGDKGQLGIQGSSGDKGERGNSGLQGERGTTG PRGFRGTRGRRGAEGLPGPKGDTGQPGPPGSSGEIGPPGVEGPRGFAGPSGPPGLDGKDG IPGPPGERGPTGESGSPGPPGIPGVIGLPGPSGEPGQPGEPGASGSPGAPGEIGLPGEQG KEGPTGPSGLTGLKGSPGPGGLPGFPGERGLSGLPGLPGLKGEMGLIGAQGPPGDKGIQG EPGKDGSPGPEGKQGHKGDEGSIGLKGEKGDPGPVGPVGRDGLPGQRGLSGPPGPVGSPG EDGDKGNVGPPGEKGFKGSQGDVGFPGPQGVQGPRGESGLVGPPGEKGPPGEIGQRGPKG EVGPVGATGPAGSVGPSGLPGQPGVKGEVGDPGTIGSIGPLGIPGERGLRGSKGLKGTKG PTGPEGRQGEKGDDGMPGPLGKPGLEGKQGERGLPGIKGEEGKLGLLGLPGLRGLIGPEG PKGDAGLPGLPGPPGEPGLMGAKGESGKDGEDGRIGDPGVPGEAGLPGKEGLSGPPGKSG PEGLAGQQGNTGLPGEKGDIGLPGAPGFEGPVGPQGPSGLPGLPGERGLPGAAGENGIVG MPGAVGAPGIIGPIGLKGQKGDKGRRGIKGYRGEPGLIGIKGDHGKRGEKGDRGLPGTQG FKGNPGHSGQVGPRGEQGFVGLPGPLGPPGLKGNAGNDGMRGDLGPAGPPGPPGPPGLSI GQSDFDRIIPPMIYRDQLARRKRDAFEDIDEEEIFDKKLSDINKAFYNIRQELHLMRKPI GTRDNPARTCRDLFYGHSDFKDGWYWIDPNLGMPDDAISVICNITNMGETCIFPDIHSSH MPSIPWRKENNKTDWYSHLRGGFRISYETIGVVQMNFLRLLSQEAYQNFTYTCTNSVAWY DGENRNYNLSLRLLGDNGDEFSYNNIRPHLIADECKSRSRKETVFLIRTSKLQQLPLIDF YPVDYGLPQQAFGFKVGPVCFK NT seq 5109 nt NT seq  +upstreamnt  +downstreamnt atgcggctactggaccacacgagaagacaatggagaacgctgcgatctacgtggatcatg cttcttgtacattcattgtttttgatggtgctcatcctatccggtttgcagcgaaacgca gtggatgctgcgctgcaagacgcatcgaagaatgtgactgatataattgaagctatgggg atgcaagagcaacttttcggagtgagaagaacggaaagtcgttgcagagatgatacgatc gcgtacgatattatggaagctgcgattctgatggctcctaccaacgtattatttccggct ggcataccacaagatttttctatcttggttgttgcaaagccgagagctaacgagtcaacg tccaaagattactccacgtcggtactttttactatctacggtgatagtggcgaagaacag ttaattctttcgttggggcgcaatattgaatttttctatagcacaaatccagacaacaga aatgaacctatttcttttgatgtcggtatttccgacgggcaatggcatcgattaggagtt agtattaagggagatgccgttacgattattctcgattgcaatagacatattacgaaaaaa ttgcggaagaatgtcgaaaaaacaattgctggcatccttatgattggacaacaacttaag ggtgatttatatctgggaagtcttgagatgctgaaaattgctctaaatccagacgctgct tacgaaatctgtacaacgtttgcgccagattgtgaacgtgaatcaagatatggactgaat tataattcatctttcaatgaagatgattacgaagaagaaaacgagagtgactcagatgaa gatgataaccgagattttctacctcatggcacaataacaaatacaattaacgttttgaca tcagcgactaagaattccacatcttacgaagtggaaataacgacgatggcgaatgtgtat aatgcggaatcaaatcatcagcagaattacggagaatcgacaaataacccttacgacgaa gaatatataaagcgttataataaccgaggttcacctgggctccgtgggtttcctgggccg ccaggagtactcggccctcccggcgagaagggcgaacccggacgagatggattgcccgga ttgccaggtgtatctggtccgccaggtaacgtcttcgtgataccctcgttgaatcaacag ggcaacgaaaaaggaccggattctcaggcagaaatgttgcggcagatgatatcacaacat atgcttgcaatgagaggcgtagaaggcccgatgggtcttacaggtgtcccgggtccagat ggaccgcctgggcctcaaggtcagaaaggagaacctggtgaaatcggcgaacctggactt agaggggatcaaggaagtcctggaaatcctggcagagagggtaggagaggtcgtcccggc agagacggcgaacgcggtctcagtggactgccaggaatgaaaggagagcaagggcaaata ggattaccaggtctaccaggtgataaaggcgaacggggatcctcaggtaaacctggtgaa tcaggtttgcctggtcacgaaggaatgcagggtgaagatggtcctccaggtttaccaggt ctacccggtgaattgggtccgagagggtttattggaccaagaggttttgctggattacca ggtaatcccggtattcctggaaacgaagggccacccggtattaaaggtaatgctggtcca ctcggtccacctggtgcaccgggacaatcaggacctacaggttcaataggaccacctgga cctcagggtccactagggccgatcggtttagttggtccacaaggaaaaccaggaattcca ggtctttcgggtgctgatggatctcctggacttccaggcaatcctggaatcccagggaca aagggcgagcaaggtccatcgggtttacagggaccggtgggatttccgggtgttcgaggt gtaaagggcgatgaggggcaacgtggcgtagcaggtgaacgcggtgaaaaaggtgataga ggtttggaaggcgaaaaaggtgacaccggagcgaaaggagagcccggagcgacaggtccg cagggcattcctggccttgaaggtttggaagggtcgaaaggttttgagggacttcgtggt gagactgggcccgctggtttgcctggagaaaagggaaaggtaggcctaccagggtacgtt ggttatcctggaaatcctggagaaaaaggggacaaagggcaactaggaattcaaggatca agcggcgataaaggagaaagaggaaacagcggattacaaggagaacgaggtacaacgggc ccacggggttttagaggaactcgtggaagaagaggcgcggaaggattaccaggaccaaaa ggcgacactggtcagccgggcccccctggatcgtcaggagagatcgggcctcccggtgtt gaaggtccacgtggattcgctggaccatcgggtccaccgggtctcgatggaaaagatggt ataccaggtccacccggtgagcgtggtccaactggtgaatcaggatctccaggacctccg ggaattcccggtgttattggtcttccaggaccatctggagaacctggtcaaccaggcgag cctggagcatctggtagtccgggggctccgggtgaaatcggtttaccgggtgaacaaggg aaagaagggccgacgggtccatctggcttgacaggactcaaaggatcgccgggtcctggc ggattaccaggatttccaggtgaaagaggtctgagcggtttaccgggattgcctggcttg aagggtgaaatgggacttattggagctcaagggccacccggtgacaagggtattcaagga gaacccggaaaagacggatcgccaggtccagaagggaaacaagggcacaaaggagatgag ggttccatcggcctcaaaggcgaaaaaggtgatcctgggccagttggacctgtaggtcgt gacggtctaccgggacaacggggtttatcaggcccacccggaccagttggttctccgggc gaagacggtgataaaggaaacgtaggtccacctggtgaaaaaggattcaaaggatctcaa ggggacgtaggttttccaggtccgcaaggagtacaaggaccacgtggtgaatctggttta gtaggtcctccaggagagaaaggaccaccgggtgagattggacagcgagggccaaaaggc gaggtcggtccggtcggggcaactggacctgctggatctgtaggaccgagtggtttacca ggtcaaccaggtgtaaaaggtgaagttggagatcctggaactattggttctataggtcct ttaggaattccgggagagcgaggtctaagagggtccaagggccttaagggtacaaaaggt ccgacgggtccggaaggtcgtcaaggcgaaaaaggagatgacggaatgccaggacctctc ggaaagccaggactagagggaaaacagggagaaagaggtctaccaggaataaagggagag gaaggtaaattaggacttcttggacttcctggactacgaggattaattggtcccgaggga ccaaaaggtgatgctgggttacctggtcttcctggtccgcctggagaacccggtctcatg ggcgcgaaaggtgagtctggaaaggacggcgaggatggacgaataggtgatcctggcgta ccaggcgaagctggactacctggcaaggaaggattatcgggtcctcctgggaaatcgggt ccggaaggacttgcgggtcagcaaggtaatacaggtttgccaggagagaaaggagatatc ggtctccctggagcgccgggttttgaaggacctgtcggacctcaaggtccttctggtttg cctggcttaccaggcgaaagaggtttgccaggcgcggctggggaaaatggtattgtaggt atgccgggagctgttggagctcctgggattattggaccgattggtttaaaaggccagaaa ggtgataaaggtcgtagaggaattaaaggatatcgaggcgaaccgggactgattggaatt aaaggcgatcatggaaaacggggagagaaaggtgatcgcggacttcctggaacacaagga ttcaaaggaaatcctggacattctggtcaggttggacctagaggggaacaaggatttgtt ggtctacccggaccattgggaccgcctgggctaaaaggtaatgctggaaatgatgggatg cgaggtgacctaggtccggcgggtccgccaggcccaccaggaccgcctggcttgtcaata ggacagtccgattttgacagaataataccacctatgatatatcgtgaccaattagccaga agaaaacgtgatgctttcgaggacatcgatgaagaggagatattcgacaagaagctttca gacataaacaaggctttttataacatacgacaggaattgcatttaatgcgtaagccaatt ggtaccagagataatccggcgaggacatgcagagacttgttttacggacattctgatttt aaggatggttggtactggatcgatccaaatttgggcatgccagacgacgctattagtgtg atttgtaatatcacgaacatgggcgaaacttgcatctttccagacattcacagtagtcac atgccgagcataccgtggagaaaagaaaataataaaaccgactggtactcgcatctacgt ggaggatttagaataagttatgagacaatcggagttgtgcagatgaacttcctacgtcta cttagtcaagaagcttatcagaattttacgtatacgtgcacgaacagcgttgcttggtac gatggcgagaatcgcaattacaatctctcactgcgattactcggcgacaacggggacgaa ttttcgtacaacaatatcaggcctcacctcatcgcggacgagtgcaagagccgaagtcgt aaggagaccgtgttcttaattcgcaccagcaagttacaacagctaccgctgatcgatttt tatccagtcgattacggattaccacaacaagctttcggcttcaaagtcggcccagtttgt ttcaaatag

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