Trachymyrmex cornetzi: 108766918
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Entry
108766918 CDS
T11212
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108766918
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108766918
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
Helicases
108766918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
TraS
Motif
Other DBs
NCBI-GeneID:
108766918
NCBI-ProteinID:
XP_018371980
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MERNKMTNKKKVKAYVKKKRTPESKIIEALQSKYNTIDVTKTTKFSDLPLSKITLKGLTE
NNYIEMTDIQKQSIGLALQGNDILGAAKTGSGKTLAFLIPILEILYCKQWTRLDGLGSLI
ITPTRELAYQIYETLRKVGQYHSISAGLIIGGKDLKFERKRMDQCNIVICTPGRLLQHMD
ENPLFNCVNMQILVLDEADRCLDMGFEKTMNSIIENLPPKRQTLLFSATQTKSVKDLARL
SLKDPLYVSVHEHSAHTTPEGLQQSYIICSLEDKLAMLWSFIRNHMKQKIIVFFSSCKQV
KYVYEAFCRLRPGISLLALYGTLHQLRRMNIYESFCKKQHAVLFATDIAARGLDFPAVNW
VVQMDCPEDVNAYIHRAGRTARFKSGGESLLVLLPSEKMIIERLMQRKIPINMIKINPNK
LQSPHRKLEALLARDVTLKETAQRAFVSYIKSVFLMKDKEIFNVHALNTDEFAKSLGLAI
PPRIRFLQRMHKKMSSNDVKTEKEIDQTSTNSADNSDQEDSGNNSDKSDISNKSHEKRII
KEEKTAALQINDSDDEDILIIKRKNIDIDDIPMTENEDKNTSNQKKFITKVALAKKILKK
KIVPNKKTMFDDEGQELVDSAKIKMSKLARQYENEVDFGINIEMAKQVLREEDQFDKQRY
KEKNKEKRREKKKKLKINKKTETNDEESEDADDDYDIESEASEGPDLSWLPDPDKIYGKQ
NGDEEISSSNESEEDQISEEESIAHNPFKRKLVTQEEYKRIKKKQKVSNIAHLQADEELA
LQLLQN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaataaaatgactaacaaaaaaaaagtaaaggcttatgtgaaaaagaaacga
acaccagaaagtaaaataattgaggcactgcagtctaagtataacactatagatgttacg
aaaacaacaaagttcagtgatctccccttatcaaagattaccttaaagggtttaacagaa
aacaactatattgaaatgacagatatccagaagcaaagcatcggcttggccttgcagggc
aacgatatcttgggagctgcaaaaaccggcagtggcaaaacactggcttttcttattcca
atattggaaattttgtactgcaaacaatggacaagactggatggactaggctcactaatt
attacaccaacgagagagctagcgtatcagatatacgagacattgcgaaaagtgggtcag
taccatagtatttcagcaggtttaattatagggggaaaggacttaaagtttgagaggaaa
cgtatggaccagtgcaatatagttatatgtacaccaggacgtttgcttcagcatatggat
gaaaatccattatttaattgtgtgaatatgcagatattagtgttagatgaagcagatcgt
tgtttagacatgggcttcgaaaaaactatgaactccatcattgaaaacttgccccctaaa
aggcaaacattgctcttttcagcaactcaaacaaaatctgtgaaagatctggcgaggtta
agtctgaaagatccgttgtatgtatctgtgcatgaacattctgcgcacaccacaccggaa
ggcctgcaacaaagttatattatatgttccttggaagataagctagcgatgctgtggtct
tttataagaaatcatatgaagcagaagattattgtgttcttttccagctgtaaacaagtg
aagtatgtatacgaagcattttgtcgattacggccaggcattagtttattagctctttat
ggcactcttcatcagctgagaagaatgaatatttacgaatcattttgcaagaaacaacac
gctgttttattcgcgactgatattgctgcccgcggattagatttccctgccgtaaattgg
gtagtccaaatggattgtccggaagacgtcaatgcctacatacacagagcaggcaggact
gccaggtttaaaagtggtggtgaatctcttctagtgttgttaccatccgaaaaaatgata
atcgagagacttatgcaacgtaaaatcccaataaatatgataaagattaatccaaacaaa
ctgcagtcgccgcatcgtaagctggaagctttattagcgcgagatgtaacattgaaagaa
acagctcagagagcctttgtatcgtatatcaaatcagtttttttaatgaaggataaagaa
atcttcaatgtgcacgctttaaacacagatgaatttgccaaatcgttaggtttagccata
cctccaagaatccgattcttgcaaagaatgcacaagaaaatgtcgagtaatgatgtcaag
actgaaaaagagatagatcaaacttcaaccaattcagcagataacagcgatcaggaagat
agcggaaataactctgacaaaagtgatatttctaataaaagtcatgaaaaaagaataatt
aaagaggaaaaaactgctgctcttcaaattaatgatagtgatgatgaagacatattaatt
ataaaaagaaaaaatatagatattgacgatattcctatgacagagaatgaagataaaaat
acttcgaaccaaaagaaatttataacaaaagttgcactcgctaagaagattctcaaaaag
aagattgtacctaataaaaagactatgtttgatgatgagggccaagaattagttgattct
gccaaaataaaaatgtcaaaattagcacggcagtacgagaatgaagtcgattttggaatt
aatatcgagatggccaagcaagtcttacgcgaggaagatcagttcgacaaacaaagatac
aaagaaaaaaataaagaaaaacgcagagaaaagaagaagaaactgaagattaacaagaaa
acggaaacaaacgatgaagagagcgaagatgcagacgatgattatgatatcgaaagtgaa
gctagtgaaggtccagatctttcatggttacctgatccggataagatttacggcaaacaa
aatggagacgaagaaatatcgtcttctaacgagtccgaagaagatcaaatatctgaggaa
gaaagcatagctcacaaccctttcaagagaaaattggtaacgcaagaggaatacaagagg
atcaagaagaaacaaaaagtatctaatattgctcatctacaagccgatgaagaattagca
ttacagttattacagaattag
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