Trachymyrmex cornetzi: 108767063
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Entry
108767063 CDS
T11212
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108767063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcz03036
]
108767063
Chromosome and associated proteins [BR:
tcz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108767063
REST complex
108767063
Heterochromatin formation proteins
Other heterochromatin formation proteins
108767063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
108767063
NCBI-ProteinID:
XP_018372233
UniProt:
A0A195DIV6
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MKRVRGLDDIASAPAKHSSVSAASGLGGGGGSLDYHASSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKQASGSAGGLGSTCSSSSINTGGGLHSGIGGGN
SHTMASQQPTSGSQNQVHAQQQSTIRHKVHSGNVTPLASTPPGSNLGGGSGSQQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAK
APPVLQIMPGSGNIHHTLANSITTNSLTVHAPSPPPSVSVYNNSHVSTAQAQAVSQALNQ
ADGVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESG
HMGGTSSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQNSLTNKTTSV
NDHTAIVKKPIGLKTPYNNSGTISRDLREASSTAGLERDNREHRERERERDRSNIRDMSS
GQKCGHSTGQLKRSPSFSTSATAGNSHHIQHGPPPSKKHKVASMRDISIAEAGKYGTLND
YAFFDKVRKALRSQDVYENFLRCLVLFNQEIISKSELIQLVTPFLGRFPELLRWFKDFLG
YLIDSSSTTVTNAGNAIGIETFPNSIVRSHQERPQGDLAIEIDYTACKRLGASYCALPKS
YIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERFELDVVIE
TNASTIRVLEGVHKKMNRMTQEEVQKYKLDECMGGCSPTIHQRAIKRIYGDKASDIIEGL
KRNPVVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDVKAL
RSKSLFNEIETLYDERHEQGDDGNGDGQGNSGPHLVLSYKDKSVLDDAANLLIHHVKRQT
AVHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDVNMATCNNSQSATNTSSS
LSGLQANRSKAPASPSTSSATIKSEPDVKVPMHALSSDPEEAYTLFMGSNNWYLFLRLHH
ILCERLTKMYDRAVALAEEESKYKQQRRESTAVALRLKPKSEIEIEDYYPAFLDMVKNVL
DGNMESTAYEDTLREMFGIHAYIAFTLDKVVNYAVRQLQHLVSDSVCQQCMDLFQREQRQ
PKENSGAGGLCATAYMRLSAELSYQRKAEKAMADENCFKIYIYKKDCKMTMELLDTEGDE
TVDNGCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPALTENEQTTNHPVSNDQAAR
GGRGRKRKNTDISKKIDGNTWGSSGRSSAGRKPTFLCRNIKSYRKHAARLMRGKTSSLNA
NHPDKVAESSDTPDMINSDETQCRFNPNSYTMLFIVHKDRFLYKQNSMNRARRCHPAVTK
RKDSKFHHWHSLWISKNGTDIQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYRQYNR
FRVERLQSDLLTETCV
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgtggactggacgacatagcatcagcaccagcaaagcactcatcggtg
agtgcagcaagtggcttaggtggtggaggaggtagtttagattaccacgctagcagtgga
ataggtgttgttgtacctggtcaagcagttcggtctgttgcgtcaaaagaaatgccagga
agtatacagtttggcactgcccaagctcaacaacaatacactggagcgattgttgtacca
accgcagcaccatctcctatcaagcaggcgagtggctctgcgggaggacttggctccacg
tgtagcagtagcagcataaatactggtggtggtttgcatagtggaataggtggtggtaat
agtcatacaatggcttcccaacaacctacatcaggatcacaaaatcaagtccatgcgcaa
cagcaatcgacaataaggcataaggtacattctggtaatgtaacacctttggcttccact
ccacccggctctaatctgggaggaggaagtggatctcaacaattccagagattaaaagta
gaagatgctttatcttatctggatcaagtaaaatataaatttagtgatcaaccacaggta
tacaatgactttttagatattatgaaagaattcaaatctcaaagtatagatactccgggc
gttataacccgagtgagtcatctcttcaaaggacatcccgaactcatcgtcggtttcaat
acgtttctcccacccggctacaagatagaagtacaagcaaacgagcaaggatatgctttc
caagtatccgtcagtatgcccagtccaacggcaacacatactgccacattgtcgcagcat
cattgtacggtgaatgttggttcacctccagtagctagtccacccacgcaacctgcaaaa
gcacctcccgttttgcaaataatgccagggtcgggtaatatacaccatacgttggcaaac
agtattacaactaatagcttaactgttcacgcgccttcaccgccgccatcagtatcagtg
tataataattcgcacgttagcactgcacaagcgcaagctgtcagtcaggctttaaatcaa
gcagatggtgtgtcgactggtggacaaactcaacaaagtcagccggttgaatttaaccat
gcgataaactatgtcaataaaataaagaatcggttccaaggtcaaccagacaaatacaaa
cgctttttggaaatattgcatacgtatcagaaagaacagcgaaatttaaaagaatctggt
catatgggaggtacgagttctggtgcgacaggtggaacaaaacacttgacggaggcggaa
gtttatagtcaagttgctaaattatttgaaaatcaagaagatctgcttgctgagtttgga
caatttttaccggatgctaccaatcagcaaaactcgttgactaataagacaacatcagtt
aacgatcatacggcaattgtcaagaaaccaattggacttaagacaccttacaataattct
ggtactatatcgagagatcttcgagaagctagcagtacggctggattggaacgcgacaat
cgagaacatagagaacgagaacgggaacgggatagatcgaacataagagatatgagtagt
ggccagaaatgcggacacagtacaggacaattgaaaagaagtccgtcattctcgacttca
gcgactgcgggaaattctcatcatatacaacatgggccaccaccctcgaaaaagcataaa
gtggcttcgatgcgcgatatttctatcgcggaagctggtaaatacggtaccttaaatgat
tatgctttctttgataaggttcgaaaagcgctcagatcgcaagatgtctacgaaaatttt
cttcgatgccttgtgcttttcaatcaagaaataatatcgaaatcggagcttattcagcta
gtgacaccatttctcggtcgtttccccgaattattacgttggttcaaagattttctgggc
tacttaatcgattcgtcgagcactacggtgacaaatgcaggaaacgccatcggaatagaa
actttcccaaacagcattgtacgtagccatcaagaacggccgcaaggtgacttagcgata
gaaattgattatacagcgtgcaagcgactgggggcgtcgtattgcgcattaccaaaatcg
tacattcagccaaagtgtagtggcagaacgcaattgtgtaaggaagtcctcaacgatacc
tgggtttcatttccaacttggtcagaagacagtacatttgtaacatcaaggaaaacgcaa
tacgaagaatctatatatcgatgcgaggatgaacgttttgaattggatgtcgttatagaa
actaacgcatcgacaattagagtgctcgagggcgttcataagaaaatgaaccggatgact
caagaggaggtacaaaaatataaactcgacgagtgcatgggcggttgttcccctacgatt
catcaacgagcaataaaaaggatatacggtgataaagcttccgacatcatagagggtctc
aaaaggaatcctgtagtggctgtgcccgttgtactccgccgattaaaggctaaggaggag
gaatggcgggaagcgcaaaagggattcaataaaatctggagagaacaaaacgagaagtac
tacttgaaatctttagatcatcaaggaattaatttcaaacagaatgatgtaaaagcgttg
agatctaaaagtttgttcaatgaaatcgaaacattatacgacgagagacacgaacagggt
gacgacggtaatggtgacggtcaagggaacagtggtccacatctcgttctatcgtacaaa
gacaaatctgtattggacgatgctgccaatctcttgatccatcacgttaaacggcaaacc
gctgtccataaggaagacaagcaacggataaagcttttattaaaacattttatacctgat
cttttcttccatccccgacaagaacttagcgatgacgaaagggacgaagacgatgagaag
gaggatgtaaacatggcaacgtgtaataattctcaatccgcaacaaacacttcatcgtcg
ttgagtggtttgcaagctaataggagtaaggctcccgcgtcgccgagtacatcttccgct
actatcaaaagtgaacccgacgtaaaagtaccaatgcacgctctctcgagtgatcccgag
gaagcgtatacgctttttatggggagtaataattggtacctcttcctgaggttacatcat
atactatgtgaaagattaacaaaaatgtacgatagggcggttgctcttgccgaagaggag
tccaagtataaacaacagcgcagagaaagtacagctgtcgctttaagattgaaaccaaaa
agtgaaattgaaattgaagattattatcctgcctttctggatatggttaaaaatgtcctc
gacggaaatatggaaagcacagcgtacgaagacacattgcgagaaatgttcggtattcat
gcctacattgcctttactctcgacaaggtcgttaattatgcggttaggcaattgcagcat
ctagtctcagattccgtttgtcaacaatgcatggatttattccaaagggagcaacgtcaa
cctaaagaaaatagcggagctggcggactatgcgccacagcgtacatgagattaagcgct
gaattatcatatcaacgcaaggcagaaaaagcaatggcagatgaaaactgtttcaagata
tatatatataaaaaggactgtaaaatgacgatggagttgttagatacagaaggcgatgaa
acagtggataatggctgtagagagagagaaagggaaggcgttacagtttctgaaaaatgg
tcaacatacgttgagagattttcggcaccagctggtcaaactagtccaaaagacactcct
gccttaacagagaatgagcagacgaccaatcatcctgtgagtaacgaccaggcagcaagg
ggggggaggggcagaaaacgcaagaacactgacattagcaaaaagattgacggaaatact
tggggttcctcaggcagatcctcagcaggacgtaaacccacatttctctgtcgtaatatt
aaatcatatcgaaagcatgccgcaagattaatgagagggaaaacatcttcgcttaatgct
aatcatccggataaagtcgcagaatcaagcgacactccagacatgatcaattccgacgaa
acacaatgtagatttaatcccaacagttataccatgcttttcattgtccataaggacaga
tttctttacaaacaaaactccatgaaccgtgctagacggtgtcatccagctgtaacgaag
cgtaaggattccaagttccatcattggcattcgttatggatatccaaaaatggcacagat
attcaacatcggttgtgtcaagattggttgatgggacgatacgagaatttgattcctcac
aggacacgagtgataacggacaacgatcagacacgttctccctaccggcaatacaatcgt
tttcgagtagaacgtttgcaatctgatttgttgacagagacttgcgtctaa
DBGET
integrated database retrieval system
