Trachymyrmex cornetzi: 108767191
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Entry
108767191 CDS
T11212
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108767191
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108767191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_Trm732_C
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
108767191
NCBI-ProteinID:
XP_018372434
LinkDB
All DBs
Position
Unknown
AA seq
2764 aa
AA seq
DB search
MKNKPIRHKEVNVFRFKPFSERITEIDVDVFHRVAHRNEDEAEEIETYFHETLLKWNVLN
LTDGYTAFRKEVRDIITLPQLLHKKQHVIDTLMLYLRKRDPLFLQPILELIIAVARDLQK
EFYDYFPEFLSEIIYLLQTKDVEQIEYTFTTLAYLFKFLWRYLTRNIKTVMPLLLPLLAD
TQPVYINRFAAESFAFVVRKIKDKDSFLKLILHILEDRNKNAKENGVSGCAKLLFEVISG
TPGQLHSCGEQMLLLYFNALQDETIDKTLTYEVLREIITCILQNIHPQKCNIIWNVILKI
IDTFVEKSKQLEFSEKKHTLVLFLRLIHGIISCKNGRFLIDAVPVTKRFTVMIDRLSEDN
NILREVINVSIAILLASNVKLMQENSSQLVLKIMMVNDMELLYSSVENLIHYSSFEVLVL
PYVMQRSISIGFDNKLLLLLAKVILTKASPCLSGITLDKWRKYILDIRNIEIDYLLLELK
TLSTDTVSLDALRILIILPHLKPLHEEFMNMLKNGLLFLYKKILNHDGADDTEDINKTAF
IFLLTLESLIHVSEPRNLYEFLVKSDIKIVDLINKHYDNTYILNAIDLCMTYFAASQHHS
DYINLASFNKLNDKIEKKFSSPYRNVRMIVAHLYFLFSKVEDLKRPGEPLQMSDGKSTME
LVYLVECESATIQNYRSKLLYLQALGFQSHAIANLNPKYYEFPLRCLMGNLYINFSLLWQ
PVSIIIASYGNKECPQFWPTFLSELTCNNVPEIERKPSFDCYVISSLEMSVEKHDDIYIY
KPDFENYRILLWKCMAHFSHYAETKNRDLTGLFIDFVNANFFRSNSDEGKYCDVEKRKEL
IDADNDADDENKSDEERDEIIKAAQADVMKRNYKVKLLLAQMEIFDKVQNPKMMHREAEM
HQIYLDLISSRNLDIQRAALNCLFAYKYKYLLPYKEFLYGLINEKNYKSELTRFKLDRES
NMIEEEHRENLMPIIMRIIYAKMIMKTGMRTGGKASGFARRKIILRFLGGAQEDEMIIFV
KMVFRPFKSYISLEMDEAFDLKKYAENIIDTIDLNNVMPPKRMQSAVNLLAIVIEQFGGK
MSKKLLPCLLRILICILAEVNGILRRSEEVYPGYLSMIKNVRTSCIGILARFFTHFENYD
WKLHEIDAVYYVAIFPLLQKLPIEGIHSPTTLLKLFMAWSQNSRYYPLFTKYQEDNKSIT
PLPYIMQLLSNPKTHQSVINAILEMIEKMLTLEDCGKSNEDAMQVDAHFLPLTPILTNML
EVEEKILSNGVNYGSAILLPHIPHVLEFIRDRLKRSNKNINKIELTILLRISEFVTDAET
CDTVLKLIIPVLIRKTASGNNEEAVIGLLMTITNLIKIVKKPEIHLRSIAPLIGLVSDVL
ARKTLLQLYRTIAERSMEDCCEEMIRDCEVLIELNAWDHRWVDQPNFQKRLDAFELISDK
IGKNAITLEFGVTIIYNCFYFLKTESDLAMRDCSGQCLKLVGAKLAREHQNNVLNRRYLM
DDTILALTKKGITSKNEAVRLQSIAFLGHMALECADVHPVLRDLSLLANRVDPEVDFFEN
MQHLQLYRRARALLKFCTLAKTLRKPFSPKTLTQFILPLCSSYLCNETFIHKNSLVDAAI
ETVGIVCRLLPWHPYEIILKYYLGKLRSSTEFQKQVVRIVVIILDSFHYDLSKYKPAEKI
TQTKATGTEDNTAFIIEKKETNETTKENENLENTEEGDEEKLEEALNDDNVENIEEIIEK
DKEAIKEDLPIIERQTLLSQYGAKKVVFGISNGLLPQLHRSIVGRTRQESSHKINKKKIA
SETEEDDLLRVPIALALVKLLQKMPENLLDANLPGIFMKLCTFLKSRMESVRRATRETLQ
KIMITLGPKYLHYLLKELNTLLTKGFQVHVLAYTVQAVLFTLKPYYQKMDINNNLQSILS
VCKVDLFGLTAEEKEIAGIIKNVSEAKSTKSFDIFHILAEFITESCLLDLILPLKEVLIK
THSHKMIHKIVECLRNVTLGLADNAYIPLEQMLIFLYGIISESIPGLVPEKENKKLAEDE
RRIETKTLMQRSNYFLIPLEPKNRMGIKVTAKTTKHANVHVMIEFGLKLYHILLKRDKVS
GMEYKRYLEPFVSVLSNCLKSHHIKLCTVALQCLNWMLKMDLESMHASISNICDSMFVIL
HKYAAAGLSKGDNFDLVMATFKCMSVVVRDVKYFSINADQLKILILYAEQDLHDSDKHAT
AFTLLKAIIHRKMIIPEMHTVMEKVAMLSITSELEHVKLQSRSVFYSYLMSYPLGKHLDK
HIYFYLTQLSYEMQPGRLSALEMIHTIVTGFPLKTLTVRSEIIFVMTGAKLIDDDDPTCR
KLCAKCIKEMLMRISYNDRNKLFDKWPLQWLNDSIRYRTLAAQLCGIFVTVEKNDFDSRL
PQVLPLLLKQFHTNISTSDNAEFGKYMELDNTTHLQKDSNLKEERTKDHHLIQVLQLLLK
IAHYTSFLTNEKYKDFINSFAEYSQSLLAHPHLWVRLAAAQMIGFILTTFDVDKIVELIN
NPDNNKIYEGYMYSKPVETVKSLILDLMAQLYPDMTFEKLADQVVKNLIFIAKMLKSITG
SVAKNDEEDNGNKAKNSNNLSFFWVIRRFRKVVNIEITQAPKSTSVRTAMFKFIAGVVTT
VPIEYLNAILFNIMSPLVREMTTTEDTNVELRQLAKEVATIIKKSIGNEEYIKLLNQVQQ
KLDIKKAERRKVRAQQFVTDPDLAAKRKLAKQQKKKEAKKRKLDSLKGNKIAKKRKKKVE
LDDL
NT seq
8295 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagccaatccgtcataaagaagtgaacgtcttccggttcaagccattctcc
gagaggataacggaaatcgacgtcgatgtctttcaccgtgtagcacatcgaaacgaggac
gaggccgaggagattgagacctattttcacgagacactactgaaatggaacgtactcaac
ctgacggacggttacaccgccttcagaaaggaagtgcgagacatcatcacgttgccccaa
ttacttcacaagaagcagcatgtgatcgatacacttatgttgtatctgaggaaacgagat
cctttgttcctgcaaccgatcctggaattaataattgctgtagcgagagatcttcagaaa
gagttttacgattatttcccagaatttctatctgaaataatctacttgctgcaaacaaaa
gacgttgaacagatagagtatacattcaccactttggcatatttgtttaaatttctatgg
cgatatttgacaagaaatataaaaactgtgatgcccctgttactaccattgttagctgac
acgcagccagtttatataaacaggtttgctgccgaaagttttgcatttgtagttcgcaag
atcaaggataaagattcttttctgaaactgatattacatattttggaggatagaaataaa
aatgccaaggaaaatggagtatcgggttgtgcaaagttattgtttgaagttatatctggt
actccagggcagttgcattcctgcggcgaacagatgttactgctttatttcaacgctctg
caagacgagaccattgataaaacgcttacttacgaagtactacgagaaattataacatgc
atattgcaaaacatacatccacaaaaatgcaatatcatatggaatgttatactaaaaata
atagacacgtttgtcgaaaagtcaaagcagttagaattctctgagaagaaacacacttta
gttctatttttacgtcttatacatggtattatcagctgtaaaaatggaaggtttttaatt
gacgctgtacctgtgacaaaaaggttcaccgtcatgattgacagattgagtgaagacaat
aatattttgcgcgaagttatcaatgtatcgatagctattctcttggcatccaacgtcaag
ttaatgcaggagaactcgagtcaattagtactgaaaattatgatggtgaatgacatggaa
ttattatactcctctgttgaaaatttaatacactactcttcgttcgaagttttggtattg
ccttacgtaatgcagcgcagcatatctattggatttgacaataagctactgcttctgctt
gctaaagtaattctcacgaaagcatcaccctgtctcagtggtataactttggacaaatgg
agaaaatacattttagatatacgaaacattgaaattgattatctcttactagaattgaaa
acattatctactgatactgtttcgcttgacgcactgagaattttgataattttaccacat
ctgaagccgttgcatgaagaatttatgaatatgttgaaaaatggcttgttatttttatat
aaaaagatattgaatcatgatggtgcagatgacactgaggatattaataaaaccgctttt
atatttttattaacactggaatcgttaatccatgtgtcagagccaagaaatctctacgag
tttttggtaaaatctgatataaaaatagttgatttaattaacaaacattatgacaataca
tatatcttaaatgcgatagatctctgtatgacgtattttgctgcatcgcagcatcactcg
gattatataaatttagcgtcgtttaacaaattaaacgacaaaatagagaagaaatttagt
tcaccttatagaaatgttcgaatgatcgtggcacacttatatttcttattttctaaagtt
gaagatctgaaaagacctggcgaacctcttcagatgtctgatggaaaaagtactatggag
cttgtatatttagtggaatgtgaatccgcaacgatacaaaactatcgcagcaagttatta
tatttgcaggctttaggatttcagagtcatgcgatagctaatctaaatcctaaatattac
gaatttccgttacgttgcttgatgggcaatttgtacatcaatttttctctactttggcaa
cctgtgagtataatcatagctagttatggtaacaaggaatgcccacagttctggccaaca
tttctgtccgaattaacatgtaacaatgtaccggagattgaacggaaaccgtcgtttgat
tgctatgtgatttcgtcgttggagatgtcggtagaaaaacacgacgatatatatatatat
aagcctgatttcgaaaattatagaatcctcctctggaaatgtatggcacatttctcacat
tatgccgagacgaaaaatagagatttaaccggattattcattgatttcgtaaatgcaaat
ttttttagatctaattctgacgagggcaaatattgcgatgttgaaaaacgcaaggaatta
atcgacgcagataatgatgcggacgacgagaacaaaagtgatgaagagcgtgatgagatc
ataaaagctgcgcaagcggatgtgatgaaaagaaattacaaggtgaaacttttactcgct
cagatggagatattcgataaagtgcagaatccgaaaatgatgcacagagaagcggagatg
catcaaatctatctggacttgatttcttcgagaaatctcgacatacagagagccgctctg
aattgtctctttgcatacaagtacaagtatcttttgccatacaaggagttcttgtatggt
ctaataaatgagaagaattataagagtgaactcacgcgtttcaaattggatcgagagagc
aatatgatagaagaagagcatcgcgaaaatctcatgccgatcataatgagaattatttac
gccaaaatgattatgaagaccggcatgagaaccggtgggaaagccagtggatttgcacgg
agaaaaatcatcttgcgctttctaggtggtgcacaggaggacgagatgatcatattcgta
aaaatggtattcagacctttcaagtcatatatatctctggaaatggatgaggcattcgat
ttgaagaaatatgctgagaacatcatcgataccatcgacctgaataacgtcatgccacct
aaacgtatgcaaagtgccgtgaatctgttggcgatagtaatagaacaatttggcgggaaa
atgtcaaagaagttactgccctgtttgctcaggatactaatctgcatcttggctgaggtg
aatggaattctgcggagatcggaggaggtttacccgggatacttgtcaatgatcaagaat
gtgaggacaagttgcatcggtatattggccagattctttacacactttgagaactatgac
tggaaactacacgagatagacgcagtctattacgtcgcgatatttcccttgttgcagaaa
ttgcctatcgaaggtatacatagtcctacgactttattgaagctgtttatggcatggagc
cagaactcgcgatactatccgttgtttaccaagtatcaagaggacaacaagtcgatcact
cctctcccttacatcatgcaactcctgtcgaatcccaagacacaccaatccgtcatcaat
gccattctggagatgatcgaaaagatgctgacgctggaggattgcggaaaatccaacgaa
gacgcgatgcaggtggatgcgcactttttaccgttaactccgatactcactaatatgctc
gaggtggaggagaagatactttcaaacggggtcaattacggctccgctatacttctgccg
cacattcctcacgttctggagtttatcagagatagacttaaaaggtccaataagaatata
aataagatcgagttgaccatactgttacgaatctccgaatttgtcacggatgcagaaacg
tgcgatacggtattgaagttgataatacccgtgttaatcagaaagactgcatctggtaat
aacgaggaagccgttataggactgctgatgaccatcacgaacctcataaaaattgtaaaa
aagccggagattcacttgcgttccattgcgccgttgattggccttgtatcggacgtactc
gctcgcaagactcttctgcagctgtaccgtaccattgctgagagatccatggaggactgt
tgtgaggaaatgatccgggattgcgaagttctgattgaacttaatgcatgggatcacaga
tgggtcgatcaaccgaacttccaaaagagactggacgcttttgagttgatcagcgacaag
attggaaagaacgcgatcacactggaatttggcgtgactataatatacaattgtttttac
tttttgaaaaccgaatcggatttggcgatgcgagattgctccggccagtgcctgaagctt
gtcggggcgaaattggcaagagaacaccagaataatgttctgaacaggcgttacttaatg
gacgacactatcttggcacttacgaagaagggtatcacgagcaaaaacgaagctgttcgc
cttcaatcaatagcgtttttaggacatatggctctggaatgcgcggatgtgcatcccgtt
ttacgagacttgtctctgcttgccaatcgagtcgaccccgaagtcgatttcttcgagaac
atgcaacatctgcaactctacagaagggctcgcgccttactaaaattctgcacactcgct
aagacattgcgaaagccatttagtcctaaaacgttgacgcaattcattcttcccctctgc
tcatcgtatttatgcaatgagactttcattcataaaaacagcctcgttgatgccgctatc
gagactgtcggaatagtatgcagactgttaccgtggcacccctatgaaattattttgaaa
tattatttaggcaaattaaggagttccacagagttccagaaacaagtcgttaggatagta
gtaataatattagactctttccattacgatctttcaaagtacaaaccagcagaaaaaatt
acgcaaaccaaagcgacaggaaccgaagacaacactgcttttatcattgaaaagaaagaa
actaatgaaacgaccaaagaaaatgagaatcttgaaaacacggaagaaggagatgaagaa
aaattagaagaagcattaaacgatgacaacgttgaaaatattgaggaaataatagagaag
gataaagaagcgataaaggaagacttaccaataattgaaagacaaacactactttctcaa
tacggtgcgaagaaagtagtgttcggtatatcgaacggcttgttgcctcaactgcatcga
tccatcgtggggagaactcggcaagagagtagtcataaaatcaacaagaagaagatcgct
tccgagacggaagaggatgatttactgagagttcctattgctctcgcgcttgttaagtta
ctgcagaaaatgcctgagaaccttctggatgcaaatctgccaggaatttttatgaaactg
tgtacattcctcaaatcgcgtatggaatcggttcgacgtgcgactcgcgagacactacag
aaaattatgataactttaggaccgaagtatcttcattatcttttgaaggaacttaataca
ttgttaacgaaaggttttcaagtgcacgttctcgcgtatacggtacaggctgtattattc
acgctgaagccttattaccagaaaatggatattaataataatttacaaagtattttgtcc
gtgtgcaaagttgatttatttggattaaccgcggaagaaaaggagatagcgggtattatt
aaaaatgtatcggaggcaaagagtactaagagctttgatattttccatatcttagcggag
tttataacagaatcttgtttattagacttaattttgccgttgaaagaagtgctaataaag
acgcactcgcataaaatgatacataagattgtggaatgcctccgaaacgtaactctggga
ttggcggacaatgcttatatacccttggaacaaatgctcatatttctttacggtattatt
tcggaaagcataccaggccttgtacctgaaaaggaaaataaaaagctcgcggaagatgag
cgaagaatagaaacgaaaactttgatgcaacgatcgaattattttcttataccattagaa
cccaaaaacaggatgggtattaaagttactgcaaaaactaccaaacacgccaacgttcat
gtaatgatagaattcggtttgaaattgtatcatatattgctgaaacgggacaaagtttcc
ggaatggaatacaaacgttatctagaaccatttgtgtcagttttaagtaattgtttaaag
tctcatcatatcaagctatgcactgtagcattacaatgcttaaattggatgctaaaaatg
gacctagaatcgatgcacgcatcgatatcgaacatctgcgattccatgttcgtcattttg
cacaagtacgctgctgcaggattaagtaaaggagataatttcgatcttgtaatggccaca
ttcaaatgtatgtccgtggtcgttcgtgatgtgaaatacttcagcattaatgccgatcag
ctgaagattcttattttatacgcggagcaagacctacacgacagcgataagcacgctacc
gcgtttaccttactcaaggctataatacatcgaaaaatgattatcccagaaatgcacact
gtcatggagaaagtagcaatgctgagtattacctcggagctagagcacgttaaattgcaa
tcacgttctgtgttctattcttacctcatgagttatccacttggcaagcatttagacaaa
catatatatttctatctcactcagttgagttacgaaatgcaaccgggtcggctgagcgca
ctagaaatgattcataccatcgtcacgggattcccattgaagacgctaactgtaaggtca
gaaatcatatttgtaatgaccggtgcaaaattaatagacgatgacgacccaacctgccgc
aaactttgtgcaaaatgtataaaggaaatgcttatgcggatatcctataatgatagaaat
aaactatttgacaagtggccccttcagtggctaaatgattccataagataccggacatta
gcggcacagttatgtggcatattcgtgactgtcgaaaaaaacgatttcgattcgcgatta
cctcaagttttaccattgttgttaaaacagtttcacacaaatatctcaacttctgacaat
gccgaattcggaaaatatatggaactagataatacgacacacttacagaaagattccaat
ttaaaggaagaaagaacaaaagatcatcatttaattcaagtattacaactgctattaaag
atagcacattatacatctttccttacaaatgaaaagtacaaagatttcattaactctttt
gctgaatatagtcaatcattgttggcacatccacatttatgggttcgattagcagcagca
caaatgatcggttttattttgactacttttgacgttgataaaatcgtggaacttataaat
aatccagataataataaaatatacgaaggttacatgtattcgaagcctgttgaaactgta
aagagtttgattctggatttaatggctcaactttatccggacatgacatttgaaaagtta
gcagatcaagttgtgaaaaatctaatctttatcgcaaagatgttgaaatcaattacagga
tccgttgcgaaaaatgacgaggaagataatggaaataaagcaaaaaatagcaataactta
tcttttttttgggttatcaggagattcagaaaagttgttaatatagaaataacgcaagct
cccaaatcaacatcagtgagaactgcaatgtttaagttcattgcgggtgtagtaactaca
gtacctattgagtatctgaacgcgatactttttaatattatgtctccattggtacgggaa
atgactacgacagaagacacgaacgttgaattgcgtcagcttgcaaaagaagtagctact
atcattaaaaagtccataggaaatgaagaatatatcaagttactaaatcaagtacaacaa
aagttagacattaagaaagcagaaagaagaaaagttcgtgcgcaacagtttgtgactgat
cctgacttagcggctaaacgtaaactagctaaacaacaaaagaagaaggaggctaaaaaa
agaaagctagacagtttgaaaggaaacaaaatagcaaaaaaacgtaaaaagaaagtagaa
ctagatgatttataa
DBGET
integrated database retrieval system
