Trachymyrmex cornetzi: 108767193
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Entry
108767193 CDS
T11212
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108767193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcz03019
]
108767193
Messenger RNA biogenesis [BR:
tcz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108767193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
108767193
NCBI-ProteinID:
XP_018372436
UniProt:
A0A151IXD2
LinkDB
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Position
Unknown
AA seq
228 aa
AA seq
DB search
MAMATSQVKGSGWPRRASNSSFEGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEKDPS
VPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTGEDEVE
GLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgacgagccaagttaagggcagcggctggccacgtagagcgagcaacagt
tcgttcgaggggaaggtggtgcagaatcagtcggttaccatcaacaggaccgttaattta
tatcctttgacaaactatacatttggaacaaaagagccactcttcgagaaagatccatca
gtaccagcaaggtttcagcgcatgagagatgaattcgacaagattggcatgcggagaagc
gtagaaggtgtcttattggtacatgagcatggacttccacacgttcttcttctgcaactt
ggcacaacattcttcaaattacctggcggagaactcaatacaggagaagatgaggtagag
ggcctaaaacggctccttacagagacctttggacggcaggacggagtgaagcaagaatgg
gttatagaagatacaattggaaactggtggcgtccgaactttgaaccacctcaatatccg
tacgtgccgccacacattacaaaaccgaaagaacacaagagactatttctcgtacagttg
caagagaaagctctctttgctgtaccgaagaattataagttagtcgctgcacctttattt
gaattgtatgataactcacaaggctacggccctataatctcatctctaccacaatctctg
tgcaggtttaatttcatctacatgtga
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